Click here to switch to the map view.

The map label for this gene is 225861198

Identifier: 225861198

GI number: 225861198

Start: 1226177

End: 1226449

Strand: Reverse

Name: 225861198

Synonym: SPT_1291

Alternate gene names: NA

Gene position: 1226449-1226177 (Counterclockwise)

Preceding gene: 225861199

Following gene: 225861196

Centisome position: 58.07

GC content: 41.39

Gene sequence:

>273_bases
ATGAACAGTAAATTTTATAAAATGAGACGCAATCGCATGATTTCAGGAGTTCTGGCAGGTCTGTCAGACAAGTGGAATTT
TGATGTTACCCTAGTTCGTTTCTTGTTTGCCATTTTTACAGTTGCAAACTTTGGACTTGGCGTGATTATCTATATCATCC
TAGCTTCTATCATGCCTACCAAGGAAGAAATCGAAGCAGAAATGTACGGAACAGGCCCACGTAAACGCAAAGAAGCCCAA
GCCATTGACGACAATGAAGGCTGGTTTTGGTGA

Upstream 100 bases:

>100_bases
TGTCGAGGTAAATTGCTTCTGATAAATCAGCCTGAGGACTGATGAAAGCCGAGCCTCCCCGTGATATACTATGTCTAACC
TAGCAGAAAGAGGAAATATC

Downstream 100 bases:

>100_bases
GGTTCTACAGAAGATTTGGAATAAGCAAAAAGCTTTAAATCAATAGTCTAAACTGCTTGATTTAAAGCTTTTTTACTTTT
ATACTCAATAAAAATCAAAG

Product: PspC domain family

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 90; Mature: 90

Protein sequence:

>90_residues
MNSKFYKMRRNRMISGVLAGLSDKWNFDVTLVRFLFAIFTVANFGLGVIIYIILASIMPTKEEIEAEMYGTGPRKRKEAQ
AIDDNEGWFW

Sequences:

>Translated_90_residues
MNSKFYKMRRNRMISGVLAGLSDKWNFDVTLVRFLFAIFTVANFGLGVIIYIILASIMPTKEEIEAEMYGTGPRKRKEAQ
AIDDNEGWFW
>Mature_90_residues
MNSKFYKMRRNRMISGVLAGLSDKWNFDVTLVRFLFAIFTVANFGLGVIIYIILASIMPTKEEIEAEMYGTGPRKRKEAQ
AIDDNEGWFW

Specific function: Unknown

COG id: COG1983

COG function: function code KT; Putative stress-responsive transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10429; Mature: 10429

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSKFYKMRRNRMISGVLAGLSDKWNFDVTLVRFLFAIFTVANFGLGVIIYIILASIMPT
CCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
KEEIEAEMYGTGPRKRKEAQAIDDNEGWFW
HHHHHHHHCCCCCCCHHHHHCCCCCCCCCC
>Mature Secondary Structure
MNSKFYKMRRNRMISGVLAGLSDKWNFDVTLVRFLFAIFTVANFGLGVIIYIILASIMPT
CCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
KEEIEAEMYGTGPRKRKEAQAIDDNEGWFW
HHHHHHHHCCCCCCCHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA