Click here to switch to the map view.

The map label for this gene is rpmG

Identifier: 225861140

GI number: 225861140

Start: 1173842

End: 1173991

Strand: Reverse

Name: rpmG

Synonym: SPT_1230

Alternate gene names: 225861140

Gene position: 1173991-1173842 (Counterclockwise)

Preceding gene: 225861141

Following gene: 225861139

Centisome position: 55.58

GC content: 34.67

Gene sequence:

>150_bases
GTGCGAGTAAAAATTAATCTCAAATGCTCCTCTTGTGACAGTATCAATTACCTAACCAGTAAAAATTCAAAAACCCATCC
AGACAAGATTGAGGTTTTAAAGTATTGTCCCAAGGAAAGAAAAGTAACCCTACATCTTGAATCTAAGTAG

Upstream 100 bases:

>100_bases
GCTACCATGCTGTCTTTTATGCGACAAGCCTTTGTGTTGCCTTTAGTTGTCTCTTTAACCTGATTCAATTTCGAACATTA
TTAAAAGTAAAGGAAATCTA

Downstream 100 bases:

>100_bases
ATTTTATGGTAAAATAATAGGGATTTTAAGGAGTTTGATATGTATAACCTATTATTAACCATTTTATTAGTATTATCTGT
TGTGATTGTGATTGCAATTT

Product: 50S ribosomal protein L33

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 49; Mature: 49

Protein sequence:

>49_residues
MRVKINLKCSSCDSINYLTSKNSKTHPDKIEVLKYCPKERKVTLHLESK

Sequences:

>Translated_49_residues
MRVKINLKCSSCDSINYLTSKNSKTHPDKIEVLKYCPKERKVTLHLESK
>Mature_49_residues
MRVKINLKCSSCDSINYLTSKNSKTHPDKIEVLKYCPKERKVTLHLESK

Specific function: Unknown

COG id: COG0267

COG function: function code J; Ribosomal protein L33

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L33P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL331_STRPI (B1IBD3)

Other databases:

- EMBL:   CP000936
- RefSeq:   YP_001694418.1
- ProteinModelPortal:   B1IBD3
- SMR:   B1IBD3
- EnsemblBacteria:   EBSTRT00000024290
- GeneID:   6028138
- GenomeReviews:   CP000936_GR
- KEGG:   spv:SPH_1074
- GeneTree:   EBGT00050000028595
- HOGENOM:   HBG751058
- ProtClustDB:   PRK00595
- BioCyc:   SPNE487214:SPH_1074-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00294
- InterPro:   IPR001705
- InterPro:   IPR018264
- InterPro:   IPR011332
- TIGRFAMs:   TIGR01023

Pfam domain/function: PF00471 Ribosomal_L33; SSF57829 Ribosomal_zn-bd

EC number: NA

Molecular weight: Translated: 5708; Mature: 5708

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: PS00582 RIBOSOMAL_L33

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.1 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
8.2 %Cys+Met (Translated Protein)
6.1 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
8.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVKINLKCSSCDSINYLTSKNSKTHPDKIEVLKYCPKERKVTLHLESK
CEEEEEEEECCCCCCEEEECCCCCCCCCHHHHHHCCCCCCEEEEEEECC
>Mature Secondary Structure
MRVKINLKCSSCDSINYLTSKNSKTHPDKIEVLKYCPKERKVTLHLESK
CEEEEEEEECCCCCCEEEECCCCCCCCCHHHHHHCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA