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The map label for this gene is yfnB [H]

Identifier: 225861110

GI number: 225861110

Start: 1143106

End: 1143819

Strand: Reverse

Name: yfnB [H]

Synonym: SPT_1196

Alternate gene names: 225861110

Gene position: 1143819-1143106 (Counterclockwise)

Preceding gene: 225861111

Following gene: 225861109

Centisome position: 54.15

GC content: 41.6

Gene sequence:

>714_bases
TTGTTCTACAAATTTCTACTCTTCGACCTCGACCACACTCTTCTTGATTTTGATGCTGCTGAGGATGTGGCTTTGACCCA
ACTTCTAAAAGAAGAAGGAGTTGCGGATATTCAGGCTTATAAAGATTATTACGTTCCTATGAACAAGGCTCTCTGGAAAG
ACTTGGAGCTGAAGAAAATCAGTAAACAAGAGCTGGTTAACACGCGCTTTTCTCGTTTATTTGCTCATTTTGGACAGGAA
AAAGACGGTAGTTTTCTTGCCCAGCGTTACCAATTTTACCTCGCCCAGCAGGGACAAACACTATCGGGCGCTCATGATCT
CTTGGACAGCCTCATTGAGCGTGATTATAACTTGTATGCTGCGACAAATGGCATTACTGCCATTCAGACAGGACGTTTGG
CTCAATCTGGTCTAGCACCTTATTTCAATCAAGTCTTTATCTCAGAACAGTTGCAAACTCAAAAGCCGGATGCTCTTTTT
TATGAAAAGATTGGCCAGCAAATTGCTGGATTTAGTAAAGAAAAGACGCTGATGATTGGAGATTCTCTAACCGCCGACAT
TCAAGGTGGCAATAATGCGGGGATTGACACTATCTGGTATAATCCTCATCACCTCGAAAATCACACACAAGCCCAGCCGA
CTTACGAAGTCTATTCTTACCAAGACTTGCTGGATTGTTTAGATAAAAATATTCTTGAAAAGATCACGTTTTAA

Upstream 100 bases:

>100_bases
AAAGTGTTCGAATTTTTTTTAAGTGATTAAATTAGTTAATTGTATGAGGTGCTTTATGATATAATGTTCTTAATGAATTT
TCAGAAAGGAAAACCTCAAA

Downstream 100 bases:

>100_bases
AGGAGATTAGCTAATGACTACAAAAAAAGCTAATATTACTATTGAAGAGTACATTGAAATGTCTGAAGTTGATTTTAATG
AAGCTGTTAATTATGAATTT

Product: HAD superfamily (subfamily IA) hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
MFYKFLLFDLDHTLLDFDAAEDVALTQLLKEEGVADIQAYKDYYVPMNKALWKDLELKKISKQELVNTRFSRLFAHFGQE
KDGSFLAQRYQFYLAQQGQTLSGAHDLLDSLIERDYNLYAATNGITAIQTGRLAQSGLAPYFNQVFISEQLQTQKPDALF
YEKIGQQIAGFSKEKTLMIGDSLTADIQGGNNAGIDTIWYNPHHLENHTQAQPTYEVYSYQDLLDCLDKNILEKITF

Sequences:

>Translated_237_residues
MFYKFLLFDLDHTLLDFDAAEDVALTQLLKEEGVADIQAYKDYYVPMNKALWKDLELKKISKQELVNTRFSRLFAHFGQE
KDGSFLAQRYQFYLAQQGQTLSGAHDLLDSLIERDYNLYAATNGITAIQTGRLAQSGLAPYFNQVFISEQLQTQKPDALF
YEKIGQQIAGFSKEKTLMIGDSLTADIQGGNNAGIDTIWYNPHHLENHTQAQPTYEVYSYQDLLDCLDKNILEKITF
>Mature_237_residues
MFYKFLLFDLDHTLLDFDAAEDVALTQLLKEEGVADIQAYKDYYVPMNKALWKDLELKKISKQELVNTRFSRLFAHFGQE
KDGSFLAQRYQFYLAQQGQTLSGAHDLLDSLIERDYNLYAATNGITAIQTGRLAQSGLAPYFNQVFISEQLQTQKPDALF
YEKIGQQIAGFSKEKTLMIGDSLTADIQGGNNAGIDTIWYNPHHLENHTQAQPTYEVYSYQDLLDCLDKNILEKITF

Specific function: Unknown

COG id: COG1011

COG function: function code R; Predicted hydrolase (HAD superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. YjjG family [H]

Homologues:

Organism=Escherichia coli, GI1790833, Length=231, Percent_Identity=30.7359307359307, Blast_Score=103, Evalue=8e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006439
- InterPro:   IPR011951 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 27135; Mature: 27135

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFYKFLLFDLDHTLLDFDAAEDVALTQLLKEEGVADIQAYKDYYVPMNKALWKDLELKKI
CCCEEEEHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHH
SKQELVNTRFSRLFAHFGQEKDGSFLAQRYQFYLAQQGQTLSGAHDLLDSLIERDYNLYA
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEE
ATNGITAIQTGRLAQSGLAPYFNQVFISEQLQTQKPDALFYEKIGQQIAGFSKEKTLMIG
ECCCCEEEECCCHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEC
DSLTADIQGGNNAGIDTIWYNPHHLENHTQAQPTYEVYSYQDLLDCLDKNILEKITF
CCEEEEECCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MFYKFLLFDLDHTLLDFDAAEDVALTQLLKEEGVADIQAYKDYYVPMNKALWKDLELKKI
CCCEEEEHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHH
SKQELVNTRFSRLFAHFGQEKDGSFLAQRYQFYLAQQGQTLSGAHDLLDSLIERDYNLYA
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEE
ATNGITAIQTGRLAQSGLAPYFNQVFISEQLQTQKPDALFYEKIGQQIAGFSKEKTLMIG
ECCCCEEEECCCHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEC
DSLTADIQGGNNAGIDTIWYNPHHLENHTQAQPTYEVYSYQDLLDCLDKNILEKITF
CCEEEEECCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9141694; 9384377 [H]