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The map label for this gene is yqfA [C]

Identifier: 225860765

GI number: 225860765

Start: 767192

End: 767839

Strand: Reverse

Name: yqfA [C]

Synonym: SPT_0809

Alternate gene names: 225860765

Gene position: 767839-767192 (Counterclockwise)

Preceding gene: 225860766

Following gene: 225860761

Centisome position: 36.35

GC content: 41.05

Gene sequence:

>648_bases
ATGAACACTAGTCTTAAACTCAGCAAACAACTCAGTTTTGGAGAGGAGATTGCTAATAGCGTGACCCATGCTGTGGGTGC
AGTCATCATGCTTATCTTGCTGCCTATTTCATCCATCTATAGTTATGAAGCACACGGATTTTTATCCTCTATCGGCGTTT
CCATTTTCGTCATCAGTCTCTTTCTCATGTTCCTATCATCCACCATTTATCACTCTATGGCCTATGGTTCGACCCACAAA
TATGTTTTGCGAATCATTGACCATTCTATGATTTACGTTGCCATTGCCGGCTCATACACGCCCGTTGTCTTGACCTTGAT
GAATAACTGGTTTGGCTATCTGATTATTGTCATCCAATGGGGAACGACCATCTTTGGTATTCTCTATAAAATCTTTGCTA
AAAAGGTCAATGAGAAATTTAGCCTTGCTCTTTACCTGATTATGGGCTGGTTGGTTCTGGCTATCATTCCTGCCATTATC
AATCAAACGACACCCGTTTTCTGGAGTCTCATGGTAACTGGCGGACTCTGTTATACAGTTGGAGCTGGATTTTATGCCAA
GAAAAAACCTTATTTCCACATGATTTGGCATCTCTTTATCCTAGCTGCGTCCGTACTCCAATACATCGCTATTGTTTATT
ACATGTAA

Upstream 100 bases:

>100_bases
TTGACCCAGCTAACCCTATTATCCAAACCAGCTGCCAAACCGTTAAACTCTATCATCAAACTCTAGACTTAATCGATCAT
ACTCAAGAGGAGGTAATCCA

Downstream 100 bases:

>100_bases
AAAAGTTGAGAAATTCAATCTCAACTTTTTTCTTTACACATATTGATAAAGTACTGGTGCAAGCGCACATCATCAGTCAA
TTCTGGATGAAAAGAACTTA

Product: hemolysin-3 (Hemolysin III) (Hly-III)

Products: NA

Alternate protein names: Hemolysin III; Hly-III [H]

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MNTSLKLSKQLSFGEEIANSVTHAVGAVIMLILLPISSIYSYEAHGFLSSIGVSIFVISLFLMFLSSTIYHSMAYGSTHK
YVLRIIDHSMIYVAIAGSYTPVVLTLMNNWFGYLIIVIQWGTTIFGILYKIFAKKVNEKFSLALYLIMGWLVLAIIPAII
NQTTPVFWSLMVTGGLCYTVGAGFYAKKKPYFHMIWHLFILAASVLQYIAIVYYM

Sequences:

>Translated_215_residues
MNTSLKLSKQLSFGEEIANSVTHAVGAVIMLILLPISSIYSYEAHGFLSSIGVSIFVISLFLMFLSSTIYHSMAYGSTHK
YVLRIIDHSMIYVAIAGSYTPVVLTLMNNWFGYLIIVIQWGTTIFGILYKIFAKKVNEKFSLALYLIMGWLVLAIIPAII
NQTTPVFWSLMVTGGLCYTVGAGFYAKKKPYFHMIWHLFILAASVLQYIAIVYYM
>Mature_215_residues
MNTSLKLSKQLSFGEEIANSVTHAVGAVIMLILLPISSIYSYEAHGFLSSIGVSIFVISLFLMFLSSTIYHSMAYGSTHK
YVLRIIDHSMIYVAIAGSYTPVVLTLMNNWFGYLIIVIQWGTTIFGILYKIFAKKVNEKFSLALYLIMGWLVLAIIPAII
NQTTPVFWSLMVTGGLCYTVGAGFYAKKKPYFHMIWHLFILAASVLQYIAIVYYM

Specific function: Unknown

COG id: COG1272

COG function: function code R; Predicted membrane protein, hemolysin III homolog

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0073 (Hly-III) family [H]

Homologues:

Organism=Homo sapiens, GI154759275, Length=224, Percent_Identity=28.5714285714286, Blast_Score=68, Evalue=6e-12,
Organism=Escherichia coli, GI1789266, Length=206, Percent_Identity=34.4660194174757, Blast_Score=113, Evalue=1e-26,
Organism=Caenorhabditis elegans, GI71996356, Length=201, Percent_Identity=32.8358208955224, Blast_Score=64, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004254
- InterPro:   IPR005744 [H]

Pfam domain/function: PF03006 HlyIII [H]

EC number: NA

Molecular weight: Translated: 24174; Mature: 24174

Theoretical pI: Translated: 9.57; Mature: 9.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTSLKLSKQLSFGEEIANSVTHAVGAVIMLILLPISSIYSYEAHGFLSSIGVSIFVISL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLMFLSSTIYHSMAYGSTHKYVLRIIDHSMIYVAIAGSYTPVVLTLMNNWFGYLIIVIQW
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHH
GTTIFGILYKIFAKKVNEKFSLALYLIMGWLVLAIIPAIINQTTPVFWSLMVTGGLCYTV
HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHH
GAGFYAKKKPYFHMIWHLFILAASVLQYIAIVYYM
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNTSLKLSKQLSFGEEIANSVTHAVGAVIMLILLPISSIYSYEAHGFLSSIGVSIFVISL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLMFLSSTIYHSMAYGSTHKYVLRIIDHSMIYVAIAGSYTPVVLTLMNNWFGYLIIVIQW
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHH
GTTIFGILYKIFAKKVNEKFSLALYLIMGWLVLAIIPAIINQTTPVFWSLMVTGGLCYTV
HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHH
GAGFYAKKKPYFHMIWHLFILAASVLQYIAIVYYM
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7495855 [H]