Click here to switch to the map view.

The map label for this gene is 225860644

Identifier: 225860644

GI number: 225860644

Start: 642585

End: 642944

Strand: Reverse

Name: 225860644

Synonym: SPT_0674

Alternate gene names: NA

Gene position: 642944-642585 (Counterclockwise)

Preceding gene: 225860661

Following gene: 225860643

Centisome position: 30.44

GC content: 34.17

Gene sequence:

>360_bases
ATGGGTATGATTTTAATGAAATTAGCATCTATTTTATTATTGATACTGACCTTAGTCGTCTGCATTATCCTAACCAAACT
TTTTAGATTAAAAAAACTAGGACGAAACTTTGCGGATTTGGCTTTTCCGGTCTTGGTATTTGAATATTACCTGATTACAG
CTAAAACCTTTACCCATAATTTCCTCCCTAGACTGGGGCTAGCCCTCTCGATCCTAGCCATTATTCTCGTCTTTTTCTTC
CTTTTGAAAAAACGCAGCTTTTACTATCCTAAATTCATCAAATTCTTCTGGCGTACAGGATTTTTATTAACCCTTATCAT
GTATATAGAGATGGTTGTTGAATTGTTCTTAATGAAATAG

Upstream 100 bases:

>100_bases
AACTTTCATTATAACAAAAATCACCCACAATCTCAAAAGCCTGACTTTCCTATAAATTCCTCTGTTTCTCGTTTCCATTA
GCCTTTTTTTATGATACAAT

Downstream 100 bases:

>100_bases
TCGAATCCCTAAGCATTTTCTAGGGATTTTTGCTTTCTCTACAAAATAGTATAGACAATAACACTATACAATTTTATACA
AAGAAAAGAGTCTGGGACAA

Product: integral membrane protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 119; Mature: 118

Protein sequence:

>119_residues
MGMILMKLASILLLILTLVVCIILTKLFRLKKLGRNFADLAFPVLVFEYYLITAKTFTHNFLPRLGLALSILAIILVFFF
LLKKRSFYYPKFIKFFWRTGFLLTLIMYIEMVVELFLMK

Sequences:

>Translated_119_residues
MGMILMKLASILLLILTLVVCIILTKLFRLKKLGRNFADLAFPVLVFEYYLITAKTFTHNFLPRLGLALSILAIILVFFF
LLKKRSFYYPKFIKFFWRTGFLLTLIMYIEMVVELFLMK
>Mature_118_residues
GMILMKLASILLLILTLVVCIILTKLFRLKKLGRNFADLAFPVLVFEYYLITAKTFTHNFLPRLGLALSILAIILVFFFL
LKKRSFYYPKFIKFFWRTGFLLTLIMYIEMVVELFLMK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14071; Mature: 13940

Theoretical pI: Translated: 10.77; Mature: 10.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGMILMKLASILLLILTLVVCIILTKLFRLKKLGRNFADLAFPVLVFEYYLITAKTFTHN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
FLPRLGLALSILAIILVFFFLLKKRSFYYPKFIKFFWRTGFLLTLIMYIEMVVELFLMK
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GMILMKLASILLLILTLVVCIILTKLFRLKKLGRNFADLAFPVLVFEYYLITAKTFTHN
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
FLPRLGLALSILAIILVFFFLLKKRSFYYPKFIKFFWRTGFLLTLIMYIEMVVELFLMK
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA