| Definition | Streptococcus pneumoniae Taiwan19F-14, complete genome. |
|---|---|
| Accession | NC_012469 |
| Length | 2,112,148 |
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The map label for this gene is glnM [H]
Identifier: 225860606
GI number: 225860606
Start: 595577
End: 596254
Strand: Reverse
Name: glnM [H]
Synonym: SPT_0634
Alternate gene names: 225860606
Gene position: 596254-595577 (Counterclockwise)
Preceding gene: 225860607
Following gene: 225860605
Centisome position: 28.23
GC content: 43.95
Gene sequence:
>678_bases ATGACAGATTTATCATCTTGGACAGCCTATTTTCAGGATTTTGGACAATTTTTCAATGGTTTCCTCTTTACTCTTGCCCT AGCGATTGGATCCTTTATCCTCGCCATGGTCTTAGGAATCTTCTTTGGTGCCATGTCAACCAGTAAACGTCCGATTTTGC GAATCTTAGCTCGCATCTTCGTTGAATTTTACCAAAATACTCCCCTCTTGGTGCAGTTTGTTATTGTTTTTTATGGCCTA CCTCTTATCAGTGACCATACTATCATGATTCCGATTTATTGGACAGCTGTTCTCTGCGTGGGACTCTATCACGGCGCTTA TATCGCTGAGGTTATTCGTTCAGGGATTCAGTCTATTCCTAGTGGTCAGATGGAGGCCGCCTTGTCGCAAGGTTTTACCT ATATCAGTGCCATGCGCTTGATTATCTTGCCTCAGGCCTTCCGCATCATTCTCCCTCCATTGACCAACCAAATTGTTAAC CTCATCAAGAACACCTCTACTGTAGCTATCATCTCTGGAGTAGACTTGATGTTTGTGACTAAGTCTTGGTCGGCTCTCAA CGGAAACTATATCCCAGGCTTTTTAGGTGCTGCTCTTCTCTACTTTGCCCTATGCTTCCCTGTTGCCCAGTTTGGTCGCA AGATGGAGCAAGTCAACAAAAAAGCCTATTCACTTTAG
Upstream 100 bases:
>100_bases CTTGGTTACTAAATGGAGCAAGGATGGTAGTTTGCAGAAACTTTATGACCGTTACAAGCTCAAACCATCTAGTCATACCG CAGATTAAGGAGGATACCCT
Downstream 100 bases:
>100_bases GAGGTTACTATGGAATCTATTTTAGAAGTTTTAACCCCAGATAACCTAGTCTTTATCTTTAAAGGATTTGGCTTGACCCT CTATATTTCTCTGATTGCCA
Product: ABC transporter membrane-spanning permease - glutamine transport
Products: ADP; phosphate; L-glutamate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 225; Mature: 224
Protein sequence:
>225_residues MTDLSSWTAYFQDFGQFFNGFLFTLALAIGSFILAMVLGIFFGAMSTSKRPILRILARIFVEFYQNTPLLVQFVIVFYGL PLISDHTIMIPIYWTAVLCVGLYHGAYIAEVIRSGIQSIPSGQMEAALSQGFTYISAMRLIILPQAFRIILPPLTNQIVN LIKNTSTVAIISGVDLMFVTKSWSALNGNYIPGFLGAALLYFALCFPVAQFGRKMEQVNKKAYSL
Sequences:
>Translated_225_residues MTDLSSWTAYFQDFGQFFNGFLFTLALAIGSFILAMVLGIFFGAMSTSKRPILRILARIFVEFYQNTPLLVQFVIVFYGL PLISDHTIMIPIYWTAVLCVGLYHGAYIAEVIRSGIQSIPSGQMEAALSQGFTYISAMRLIILPQAFRIILPPLTNQIVN LIKNTSTVAIISGVDLMFVTKSWSALNGNYIPGFLGAALLYFALCFPVAQFGRKMEQVNKKAYSL >Mature_224_residues TDLSSWTAYFQDFGQFFNGFLFTLALAIGSFILAMVLGIFFGAMSTSKRPILRILARIFVEFYQNTPLLVQFVIVFYGLP LISDHTIMIPIYWTAVLCVGLYHGAYIAEVIRSGIQSIPSGQMEAALSQGFTYISAMRLIILPQAFRIILPPLTNQIVNL IKNTSTVAIISGVDLMFVTKSWSALNGNYIPGFLGAALLYFALCFPVAQFGRKMEQVNKKAYSL
Specific function: Part of the ABC transporter complex glnHMPQ involved in glutamine transport. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0765
COG function: function code E; ABC-type amino acid transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786874, Length=173, Percent_Identity=35.8381502890173, Blast_Score=120, Evalue=7e-29, Organism=Escherichia coli, GI87082239, Length=206, Percent_Identity=34.4660194174757, Blast_Score=112, Evalue=2e-26, Organism=Escherichia coli, GI1788226, Length=206, Percent_Identity=33.495145631068, Blast_Score=108, Evalue=2e-25, Organism=Escherichia coli, GI1786873, Length=211, Percent_Identity=27.9620853080569, Blast_Score=89, Evalue=3e-19, Organism=Escherichia coli, GI1787030, Length=215, Percent_Identity=28.3720930232558, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI48994930, Length=90, Percent_Identity=44.4444444444444, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1788645, Length=218, Percent_Identity=26.605504587156, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1787086, Length=178, Percent_Identity=27.5280898876405, Blast_Score=75, Evalue=2e-15, Organism=Escherichia coli, GI1788646, Length=175, Percent_Identity=27.4285714285714, Blast_Score=71, Evalue=5e-14, Organism=Escherichia coli, GI1787087, Length=180, Percent_Identity=28.3333333333333, Blast_Score=67, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 25028; Mature: 24897
Theoretical pI: Translated: 9.50; Mature: 9.50
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDLSSWTAYFQDFGQFFNGFLFTLALAIGSFILAMVLGIFFGAMSTSKRPILRILARIF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH VEFYQNTPLLVQFVIVFYGLPLISDHTIMIPIYWTAVLCVGLYHGAYIAEVIRSGIQSIP HHHHCCCHHHHHHHHHHHCCCHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SGQMEAALSQGFTYISAMRLIILPQAFRIILPPLTNQIVNLIKNTSTVAIISGVDLMFVT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEECCHHEEEE KSWSALNGNYIPGFLGAALLYFALCFPVAQFGRKMEQVNKKAYSL CCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TDLSSWTAYFQDFGQFFNGFLFTLALAIGSFILAMVLGIFFGAMSTSKRPILRILARIF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH VEFYQNTPLLVQFVIVFYGLPLISDHTIMIPIYWTAVLCVGLYHGAYIAEVIRSGIQSIP HHHHCCCHHHHHHHHHHHCCCHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SGQMEAALSQGFTYISAMRLIILPQAFRIILPPLTNQIVNLIKNTSTVAIISGVDLMFVT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEECCHHEEEE KSWSALNGNYIPGFLGAALLYFALCFPVAQFGRKMEQVNKKAYSL CCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamate [Periplasm]; H2O [C]
Specific reaction: ATP + L-glutamate [Periplasm] + H2O = ADP + phosphate + L-glutamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7551042; 9384377 [H]