| Definition | Streptococcus pneumoniae Taiwan19F-14, complete genome. |
|---|---|
| Accession | NC_012469 |
| Length | 2,112,148 |
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The map label for this gene is kdgA [H]
Identifier: 225860355
GI number: 225860355
Start: 331151
End: 331780
Strand: Reverse
Name: kdgA [H]
Synonym: SPT_0366
Alternate gene names: 225860355
Gene position: 331780-331151 (Counterclockwise)
Preceding gene: 225860356
Following gene: 225860353
Centisome position: 15.71
GC content: 44.44
Gene sequence:
>630_bases ATGACCAAATCAGATACGATTATTGAACTAAAAAAACAAAAAATTGTCGCTGTTATTCGAGGAAATACAAAGGAAGAAGG ACTGCAAGCCTCGATTGCTTGTATCAAGGGCGGTATCAAAGCTATTGAAATCGCCTATACCAATCAGTATGCAGGGCAAA TCATCAAGCAACTTGTAGACTTGTATCAGGACGATCAAAGTGTTTGTATCGGTGCAGGTACTGTGATTGATGCCGTAACT GCTAGAGATGCTATTCTAGCCGGAGCAAATTACGTTGTTTCTCCATCTTTCCATGCTGAAACTGCAAAAATGTGCAATCT CTACAGCACACCGTACATTCCAGGCTGTATTACTCTCACAGAGATAACGACTGCACTTGAAGCCGGTAGTGAAATCATTA AACTCTTCCCAGGTAGTGCTCTCAGTCCAGCATATATCTCTGCAGTCAAGGCACCGATCCCACAAGTTTCCGTAATGGTA ACCGGAGGAGTCGGCCTAAACAACATTCCTCAATGGTTCGCTGCTGGTGCAGACGCCGTTGGAATTGGTGGCGAACTCAA TAAACTCGCTTCCCAAGGCGACTTTGACCGCATCAGCGAGATTGCCCAACAGTATGTTACACTCAGATAA
Upstream 100 bases:
>100_bases TCTCAAATGTACTCTTCCAGGAGACCATCTCTCCACTTCCGAAACTAGTATTGAAAAATTACTGGCAAATGCACAAGATA TCATTCGTTAGGAGAATTAC
Downstream 100 bases:
>100_bases AATCATAACCACCCGTCTAAGGGGTGGTTTATCCCAGAGCTATAAGCCGTTTCTCTCCAGCGGCGTCTAAAAACGCTCGC TGAACTTCGTTCAGGTCGTG
Product: keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase
Products: NA
Alternate protein names: 4-hydroxy-2-oxoglutarate aldolase; 2-keto-4-hydroxyglutarate aldolase; KHG-aldolase; 2-dehydro-3-deoxy-phosphogluconate aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG-aldolase; Phospho-2-dehydro-3-deoxygluconate aldolase; Phospho-2-keto-3-deoxygluconate aldolase [H]
Number of amino acids: Translated: 209; Mature: 208
Protein sequence:
>209_residues MTKSDTIIELKKQKIVAVIRGNTKEEGLQASIACIKGGIKAIEIAYTNQYAGQIIKQLVDLYQDDQSVCIGAGTVIDAVT ARDAILAGANYVVSPSFHAETAKMCNLYSTPYIPGCITLTEITTALEAGSEIIKLFPGSALSPAYISAVKAPIPQVSVMV TGGVGLNNIPQWFAAGADAVGIGGELNKLASQGDFDRISEIAQQYVTLR
Sequences:
>Translated_209_residues MTKSDTIIELKKQKIVAVIRGNTKEEGLQASIACIKGGIKAIEIAYTNQYAGQIIKQLVDLYQDDQSVCIGAGTVIDAVT ARDAILAGANYVVSPSFHAETAKMCNLYSTPYIPGCITLTEITTALEAGSEIIKLFPGSALSPAYISAVKAPIPQVSVMV TGGVGLNNIPQWFAAGADAVGIGGELNKLASQGDFDRISEIAQQYVTLR >Mature_208_residues TKSDTIIELKKQKIVAVIRGNTKEEGLQASIACIKGGIKAIEIAYTNQYAGQIIKQLVDLYQDDQSVCIGAGTVIDAVTA RDAILAGANYVVSPSFHAETAKMCNLYSTPYIPGCITLTEITTALEAGSEIIKLFPGSALSPAYISAVKAPIPQVSVMVT GGVGLNNIPQWFAAGADAVGIGGELNKLASQGDFDRISEIAQQYVTLR
Specific function: KEY ENZYME IN THE ENTNER-DOUDOROFF PATHWAY. PARTICIPATES IN THE REGULATION OF THE INTRACELLULAR LEVEL OF GLYOXYLATE. [C]
COG id: COG0800
COG function: function code G; 2-keto-3-deoxy-6-phosphogluconate aldolase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the KHG/KDPG aldolase family [H]
Homologues:
Organism=Escherichia coli, GI48994954, Length=178, Percent_Identity=37.6404494382022, Blast_Score=113, Evalue=1e-26, Organism=Escherichia coli, GI1788156, Length=186, Percent_Identity=26.3440860215054, Blast_Score=65, Evalue=4e-12,
Paralogues:
None
Copy number: 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000887 - InterPro: IPR013785 [H]
Pfam domain/function: PF01081 Aldolase [H]
EC number: =4.1.3.16; =4.1.2.14 [H]
Molecular weight: Translated: 22025; Mature: 21893
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKSDTIIELKKQKIVAVIRGNTKEEGLQASIACIKGGIKAIEIAYTNQYAGQIIKQLVD CCCCCHHHEEHHCEEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHH LYQDDQSVCIGAGTVIDAVTARDAILAGANYVVSPSFHAETAKMCNLYSTPYIPGCITLT HHCCCCCEEEECCHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHCCCCCCCCEEHHH EITTALEAGSEIIKLFPGSALSPAYISAVKAPIPQVSVMVTGGVGLNNIPQWFAAGADAV HHHHHHHCCCHHEEECCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHCCCCCE GIGGELNKLASQGDFDRISEIAQQYVTLR ECCCHHHHHHCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure TKSDTIIELKKQKIVAVIRGNTKEEGLQASIACIKGGIKAIEIAYTNQYAGQIIKQLVD CCCCHHHEEHHCEEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHH LYQDDQSVCIGAGTVIDAVTARDAILAGANYVVSPSFHAETAKMCNLYSTPYIPGCITLT HHCCCCCEEEECCHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHCCCCCCCCEEHHH EITTALEAGSEIIKLFPGSALSPAYISAVKAPIPQVSVMVTGGVGLNNIPQWFAAGADAV HHHHHHHCCCHHEEECCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHCCCCCE GIGGELNKLASQGDFDRISEIAQQYVTLR ECCCHHHHHHCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8760912; 9384377 [H]