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The map label for this gene is ydcQ [H]

Identifier: 225860337

GI number: 225860337

Start: 310484

End: 311803

Strand: Reverse

Name: ydcQ [H]

Synonym: SPT_0347

Alternate gene names: 225860337

Gene position: 311803-310484 (Counterclockwise)

Preceding gene: 225860338

Following gene: 225860336

Centisome position: 14.76

GC content: 30.68

Gene sequence:

>1320_bases
ATGTTTAAACTAAAAAAAGAAGCTAACTTAAAAAGAAATTATTTTATTACAAGTTCACGTTTAAAATTGTTACATCTGAT
AATAATTATCTTTTCTATCTTTGTTTTATTAGGTTTAATAGTAAGTATTAGAGCTCCTGCTTTTATTCAAATCTTATGTA
TTGTCTTTGGTGTTCTAGCAATCTATAAAATAAATAATAAATTAAAAGATTTTAGATACGAACTAGATTTTGATTTAATT
ATCAGGGAAAGCTTACTATTTGTTTTATATACAAATCATCTCTACACTTCGGAAAAGGATAATTCAGGTTACGAAAAAAT
TATTAGAAGTGCGATTTTAAAATATGAATTAGATAATCAAAACGGTCGTATTATCATTAAAGCGCTTATCAGAGGTGACG
AATTTAGTAAAAAGGTTCAGACACTTGACGATGTATTAGCTGGAGTTCTAGAACTTGAACTAGAAGAAAAAATTACTCAT
CCTAATATTGTGGAATATCACTTTTATTACAAGAAACCTGATAGACTAATATTATCACCCCATGATCATAAAAAAGAGAT
AGATAGTCTTGATATAGACTTAGGATATGATATAACTTATAATCCTATAAAATGCCCTCATATTTTAGTTTCAGGTGGTA
CAGGTAGCGGAAAATCTATATTTATATCTTTCTTAATTATTGAACTTCTTAAAAGAAATTCAACACTATATATTGCAGAT
CCTAAGAACAGTGATTTAGGTAGTTTATCTCATTATTTAAGCGATAAATATGTAGCTACAACCCCCAATAGTATTGCTCG
TATTGTACGTTTAGTAGTTGAACAAATGCAGGCACGATATCAAACCATGCGTGATAACTTTCATTACGGATCAAATTTTG
CCGACCATGGCTTTAAACCAGTATGGCTTATATTTGATGAAATGGGAGCATTTCAAGCTTCAGCAACAGATAAAAAATCT
AAAGAAGTTATCACCGAAGTAATGGACGGTATCAAACAAATTATCCTACTAGGGCGACAAGCAGGAGTATTTATTCTTAT
ATCTGCTCAACAAATGAGAGCTGAAACTCTAAACACTGATCTTAGAGATAATTTAGGACTGAGAATAGCTTTAGGAGCAA
ACTCAATAGAGGGATACCGCATGGTATTTGGCACGGCCACACCTGATAAGTTTAAATCTATTGAAGAAAAAGGAGCAGGA
TATCTTTATATGCAGGGCTCAGGGAAAGAAAAAGCTCAATATTGGGAAAGTCCTTATCTTGATACAACGCAATTCGATTT
TATAAAAGAACTACAATTATACGTAACAAAGTCAAAATAA

Upstream 100 bases:

>100_bases
TCCTATTGGAAGACACAACAATAACCTAAGCAGGGTTTGCTTAGGTTCTCTATATAAATAATTGTATAGTTGTTTTACCA
CTTAAAGAGGTTTGTTGTTT

Downstream 100 bases:

>100_bases
TTTCAATAGATATTTTTGCTTAAATTCAATAGATTTTCAGCAAAAATATCTATTCCTCATCGCTTAAGCGATGACAAAAA
GAAACGAGGTATTATACGAA

Product: putative otitis media-associated H10

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 439; Mature: 439

Protein sequence:

>439_residues
MFKLKKEANLKRNYFITSSRLKLLHLIIIIFSIFVLLGLIVSIRAPAFIQILCIVFGVLAIYKINNKLKDFRYELDFDLI
IRESLLFVLYTNHLYTSEKDNSGYEKIIRSAILKYELDNQNGRIIIKALIRGDEFSKKVQTLDDVLAGVLELELEEKITH
PNIVEYHFYYKKPDRLILSPHDHKKEIDSLDIDLGYDITYNPIKCPHILVSGGTGSGKSIFISFLIIELLKRNSTLYIAD
PKNSDLGSLSHYLSDKYVATTPNSIARIVRLVVEQMQARYQTMRDNFHYGSNFADHGFKPVWLIFDEMGAFQASATDKKS
KEVITEVMDGIKQIILLGRQAGVFILISAQQMRAETLNTDLRDNLGLRIALGANSIEGYRMVFGTATPDKFKSIEEKGAG
YLYMQGSGKEKAQYWESPYLDTTQFDFIKELQLYVTKSK

Sequences:

>Translated_439_residues
MFKLKKEANLKRNYFITSSRLKLLHLIIIIFSIFVLLGLIVSIRAPAFIQILCIVFGVLAIYKINNKLKDFRYELDFDLI
IRESLLFVLYTNHLYTSEKDNSGYEKIIRSAILKYELDNQNGRIIIKALIRGDEFSKKVQTLDDVLAGVLELELEEKITH
PNIVEYHFYYKKPDRLILSPHDHKKEIDSLDIDLGYDITYNPIKCPHILVSGGTGSGKSIFISFLIIELLKRNSTLYIAD
PKNSDLGSLSHYLSDKYVATTPNSIARIVRLVVEQMQARYQTMRDNFHYGSNFADHGFKPVWLIFDEMGAFQASATDKKS
KEVITEVMDGIKQIILLGRQAGVFILISAQQMRAETLNTDLRDNLGLRIALGANSIEGYRMVFGTATPDKFKSIEEKGAG
YLYMQGSGKEKAQYWESPYLDTTQFDFIKELQLYVTKSK
>Mature_439_residues
MFKLKKEANLKRNYFITSSRLKLLHLIIIIFSIFVLLGLIVSIRAPAFIQILCIVFGVLAIYKINNKLKDFRYELDFDLI
IRESLLFVLYTNHLYTSEKDNSGYEKIIRSAILKYELDNQNGRIIIKALIRGDEFSKKVQTLDDVLAGVLELELEEKITH
PNIVEYHFYYKKPDRLILSPHDHKKEIDSLDIDLGYDITYNPIKCPHILVSGGTGSGKSIFISFLIIELLKRNSTLYIAD
PKNSDLGSLSHYLSDKYVATTPNSIARIVRLVVEQMQARYQTMRDNFHYGSNFADHGFKPVWLIFDEMGAFQASATDKKS
KEVITEVMDGIKQIILLGRQAGVFILISAQQMRAETLNTDLRDNLGLRIALGANSIEGYRMVFGTATPDKFKSIEEKGAG
YLYMQGSGKEKAQYWESPYLDTTQFDFIKELQLYVTKSK

Specific function: DNA Motor Protein, Which Is Both Required To Move DNA Out Of The Region Of The Septum During Cell Division And For The Septum Formation. Tracks DNA In An ATP-Dependent Manner By Generating Positive Supercoils In Front Of It And Negative Supercoils Behind

COG id: COG1674

COG function: function code D; DNA segregation ATPase FtsK/SpoIIIE and related proteins

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FtsK domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002543 [H]

Pfam domain/function: PF01580 FtsK_SpoIIIE [H]

EC number: NA

Molecular weight: Translated: 50297; Mature: 50297

Theoretical pI: Translated: 8.92; Mature: 8.92

Prosite motif: PS00227 TUBULIN ; PS50901 FTSK

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKLKKEANLKRNYFITSSRLKLLHLIIIIFSIFVLLGLIVSIRAPAFIQILCIVFGVLA
CCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
IYKINNKLKDFRYELDFDLIIRESLLFVLYTNHLYTSEKDNSGYEKIIRSAILKYELDNQ
HHHHCCHHHHHHEECCHHHHHHHHHEEEEEECCEECCCCCCCHHHHHHHHHHHEEEECCC
NGRIIIKALIRGDEFSKKVQTLDDVLAGVLELELEEKITHPNIVEYHFYYKKPDRLILSP
CCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCEEEECC
HDHKKEIDSLDIDLGYDITYNPIKCPHILVSGGTGSGKSIFISFLIIELLKRNSTLYIAD
CCCHHHHCCCEEEECCCEECCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEC
PKNSDLGSLSHYLSDKYVATTPNSIARIVRLVVEQMQARYQTMRDNFHYGSNFADHGFKP
CCCCCHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCE
VWLIFDEMGAFQASATDKKSKEVITEVMDGIKQIILLGRQAGVFILISAQQMRAETLNTD
EEEEEEHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHCCC
LRDNLGLRIALGANSIEGYRMVFGTATPDKFKSIEEKGAGYLYMQGSGKEKAQYWESPYL
HHCCCCEEEEECCCCCCCEEEEEECCCCHHHHHHHHCCCCEEEEECCCCHHHHHCCCCCC
DTTQFDFIKELQLYVTKSK
CCHHHHHHHHHHHEEECCC
>Mature Secondary Structure
MFKLKKEANLKRNYFITSSRLKLLHLIIIIFSIFVLLGLIVSIRAPAFIQILCIVFGVLA
CCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
IYKINNKLKDFRYELDFDLIIRESLLFVLYTNHLYTSEKDNSGYEKIIRSAILKYELDNQ
HHHHCCHHHHHHEECCHHHHHHHHHEEEEEECCEECCCCCCCHHHHHHHHHHHEEEECCC
NGRIIIKALIRGDEFSKKVQTLDDVLAGVLELELEEKITHPNIVEYHFYYKKPDRLILSP
CCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCEEEECC
HDHKKEIDSLDIDLGYDITYNPIKCPHILVSGGTGSGKSIFISFLIIELLKRNSTLYIAD
CCCHHHHCCCEEEECCCEECCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEC
PKNSDLGSLSHYLSDKYVATTPNSIARIVRLVVEQMQARYQTMRDNFHYGSNFADHGFKP
CCCCCHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCE
VWLIFDEMGAFQASATDKKSKEVITEVMDGIKQIILLGRQAGVFILISAQQMRAETLNTD
EEEEEEHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHCCC
LRDNLGLRIALGANSIEGYRMVFGTATPDKFKSIEEKGAGYLYMQGSGKEKAQYWESPYL
HHCCCCEEEEECCCCCCCEEEEEECCCCHHHHHHHHCCCCEEEEECCCCHHHHHCCCCCC
DTTQFDFIKELQLYVTKSK
CCHHHHHHHHHHHEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]