Click here to switch to the map view.

The map label for this gene is 225860022

Identifier: 225860022

GI number: 225860022

Start: 6177

End: 6374

Strand: Reverse

Name: 225860022

Synonym: SPT_0010

Alternate gene names: NA

Gene position: 6374-6177 (Counterclockwise)

Preceding gene: 225860023

Following gene: 225860021

Centisome position: 0.3

GC content: 38.89

Gene sequence:

>198_bases
ATGGCGATGAACATTTGTCAAAGAGTGATTAGACTAGAAGAAACCGTTGAGCGGATCAGTGAGGCGCTGGATGGCTTTAT
TGAGAATGCGAACCATAACGCTATAGTAAGCAATAAAAACATCGAACGGATTCAGGAAAGTTTTGAAATAGTCTTTAAAG
AGCTTGATGAACTAAAAGCAGTACCTGACAAACACTAA

Upstream 100 bases:

>100_bases
CTAATCTAACACCCTTGAAACGTTGATATAGTAGGCTTTTGAAGGGTTATTTTTTAAACCTAATCAAAACCTAATCTAAG
AGAAAAAAGGAGCAAACCAG

Downstream 100 bases:

>100_bases
AACATTTAAACAAAATGGGGTAGATAGTACCGACCCCCTTGCAATGGTGTAACTACTAGTGACACCCTAAAAACAGAAAG
AGGAAAAACAACATGACATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 65; Mature: 64

Protein sequence:

>65_residues
MAMNICQRVIRLEETVERISEALDGFIENANHNAIVSNKNIERIQESFEIVFKELDELKAVPDKH

Sequences:

>Translated_65_residues
MAMNICQRVIRLEETVERISEALDGFIENANHNAIVSNKNIERIQESFEIVFKELDELKAVPDKH
>Mature_64_residues
AMNICQRVIRLEETVERISEALDGFIENANHNAIVSNKNIERIQESFEIVFKELDELKAVPDKH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7540; Mature: 7408

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMNICQRVIRLEETVERISEALDGFIENANHNAIVSNKNIERIQESFEIVFKELDELKA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHC
VPDKH
CCCCC
>Mature Secondary Structure 
AMNICQRVIRLEETVERISEALDGFIENANHNAIVSNKNIERIQESFEIVFKELDELKA
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHC
VPDKH
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA