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The map label for this gene is lytB [H]

Identifier: 225859960

GI number: 225859960

Start: 2134034

End: 2136112

Strand: Reverse

Name: lytB [H]

Synonym: SP70585_2316

Alternate gene names: 225859960

Gene position: 2136112-2134034 (Counterclockwise)

Preceding gene: 225859961

Following gene: 225859957

Centisome position: 97.78

GC content: 41.22

Gene sequence:

>2079_bases
ATGTTTGCATCAAAAAACGAAAGAAAAGTACATTATTCAATTCGTAAATTTAGTATTGGAGTAGCTAGTGTAGCTGTTGC
CAGTCTTTTTATGGGAAGTGTGGTTCATGCGACAGAGAACGAGGGAACTACCCAAGTAGCCACTTCTTCTAATAAGGCAA
ATAAAAGTCAGACAGAACATATGAAAGCTGCTAAACAAGTCGATGAATATATAAAAAAAATGCTCCAATTAGATAGAAGA
AAACATACCCAAAATGTCGGCTTACTCACAAAGTTGGGCGCAATTAAAACGGAGTATTTGCATGGATTAAGTGTTTCAAA
AGAGAAGTCGGAAGCTGAGTTGCCGTCAAAAATAAAAGCAGAGTTAGACGCAGCTTTTGAGAACTTTAAAAAAGATACAT
TGAAACCAGGAGAAAAGGTAGCAGAAGCTAAGAAAAAAGCCGAGGATCAAAAAGAAGAAGATCGTCGTAACTACCCAACC
AATACTTACAAAACGCTTGAACTTGAAATTGCTGAGTTCGATGTGAAAGTTAAAGAAGCGGAGCTTGAACTAGTAAAAGA
GGAAGCTAAGGAACCTCGAGACGAGGAAAAAATTAAGCAAGCAAAAGAGAAAGTTGAGAGTAAAAAAGCTGAGGCTACAA
GGCTAGAAAACATCAAGACAGATCGTAAAAAAGCAGAAGAAGAAGCTAAACGAAAAGCAGATGCTAAGTTGAAGGAAGCT
AATGTAGCGACTTCAGATCAAGGTAACCCAAAGGGGCGGGGAAAACGAGGAGTTCCTGGAGAGCTAGCAACACCTGATAA
AAAAGAAAATGATGCGAAGTCTTCAGATTCTAGCGTAGGTGAAGAAACTCTTCCAAGCTCATCCCTGAAATCAGGAAAAA
AGGTAACAGAAGCTGAGAAGAAGGTTGAAGAAGCTGAGAAAAAAGCCAAGGATCAAAAAGAAGAAGATCGCCGTAACTAC
CCAACCAATACTTACAAAACGCTTGACCTTGAAATTGCTGAGTCCGATGTGAAAGTTAAAGAAGCGGAGCTTGAACTAGT
AAAAGAGGAAGCTAAGGAACCTCGAGACGAGGAAAAAATTAAGCAAGCAAAAGAGAAAGTTGAGAGTAAAAAAGCTGAGG
CTACAAGGTTAGAAAAAATCAAGACAGATCGTAAAAAAGCAGAAGAAGCTAAACGAAAAGCAGCAGAAGAAGATAAAGTT
AAAGAAAAACCAGCTGAACAACCACAACCAGCGCCGGCTCCTCAACCAGAAAAACCAGCTCCAAAACCAGAGAAGCCAGC
TGAACAACCAAAAGCAGAAAAAACAGATGATCAACAAGCTGAAGAAGACTATGCTCGTAGATCAGAAGAAGAATATAATC
GCTTGACTCAACAGCAACCGCCAAAAACTGAAAAACCAGCACAACCATCTACTCCAAAAACAGGCTGGAAACAAGAAAAC
GGTATGTGGTACTTCTACAATACTGATGGTTCAATGGCAACAGGATGGCTCCAAAACAACGGTTCATGGTACTACCTCAA
CAGCAATGGTGCTATGGCAACAGGTTGGCTCCAAAACAATGGATCATGGTATTACCTAAATGCTAACGGTGCTATGGCAA
CAGGATGGCTCCAAAACAATGGATCATGGTACTACCTCAACAGCAATGGCGCTATGGCGACAGGATGGCTCCAATACAAT
GGTTCATGGTACTATCTCAACGCTAATGGTGATATGGCGACAGGATGGCTCCAAAACAACGGTTCATGGTACTACCTAAA
CGCTAACGGTGCTATGGCAACAGGTTGGGCTAAAGTCAACAGTTCATGGTATTACCTCAACGCTAACGGTGCTATGGCAA
CAGGTTGGGCTAAAGTCAACAGTTCATGGTATTACCTAAACGCTAATGGTGATATGGCGACAGGTTGGGTGAAAGATGGA
GATACCTGGTACTATCTTGAAGCATCAGGTGCTATGAAAGCAAGCCAATGGTTCAAAGTATCAGATAAATGGTACTATGT
CAATGGCTCAGGTGCCCTTGCAGTCAACACAACTGTAGATGGCTATGGAGTCAATGCCAATGGTGAATGGGTAAACTAA

Upstream 100 bases:

>100_bases
AAATGGAAGCATAAAGAGATAAATACAAAATTCGATTTATATACAGTTCATATTGAAGTGATATAGTAAGGTTAAAGAAA
AAATATAGAAGGAAATAAAC

Downstream 100 bases:

>100_bases
ACCTAATATAACTAGTTAATACTGACTTCCTGTAAGAACTTTTTAAAGTATTCCCTACAAATACCATATCCTTTCAGTAG
ATAATATACCCTTGTAGGAA

Product: choline binding protein A

Products: NA

Alternate protein names: Murein hydrolase [H]

Number of amino acids: Translated: 692; Mature: 692

Protein sequence:

>692_residues
MFASKNERKVHYSIRKFSIGVASVAVASLFMGSVVHATENEGTTQVATSSNKANKSQTEHMKAAKQVDEYIKKMLQLDRR
KHTQNVGLLTKLGAIKTEYLHGLSVSKEKSEAELPSKIKAELDAAFENFKKDTLKPGEKVAEAKKKAEDQKEEDRRNYPT
NTYKTLELEIAEFDVKVKEAELELVKEEAKEPRDEEKIKQAKEKVESKKAEATRLENIKTDRKKAEEEAKRKADAKLKEA
NVATSDQGNPKGRGKRGVPGELATPDKKENDAKSSDSSVGEETLPSSSLKSGKKVTEAEKKVEEAEKKAKDQKEEDRRNY
PTNTYKTLDLEIAESDVKVKEAELELVKEEAKEPRDEEKIKQAKEKVESKKAEATRLEKIKTDRKKAEEAKRKAAEEDKV
KEKPAEQPQPAPAPQPEKPAPKPEKPAEQPKAEKTDDQQAEEDYARRSEEEYNRLTQQQPPKTEKPAQPSTPKTGWKQEN
GMWYFYNTDGSMATGWLQNNGSWYYLNSNGAMATGWLQNNGSWYYLNANGAMATGWLQNNGSWYYLNSNGAMATGWLQYN
GSWYYLNANGDMATGWLQNNGSWYYLNANGAMATGWAKVNSSWYYLNANGAMATGWAKVNSSWYYLNANGDMATGWVKDG
DTWYYLEASGAMKASQWFKVSDKWYYVNGSGALAVNTTVDGYGVNANGEWVN

Sequences:

>Translated_692_residues
MFASKNERKVHYSIRKFSIGVASVAVASLFMGSVVHATENEGTTQVATSSNKANKSQTEHMKAAKQVDEYIKKMLQLDRR
KHTQNVGLLTKLGAIKTEYLHGLSVSKEKSEAELPSKIKAELDAAFENFKKDTLKPGEKVAEAKKKAEDQKEEDRRNYPT
NTYKTLELEIAEFDVKVKEAELELVKEEAKEPRDEEKIKQAKEKVESKKAEATRLENIKTDRKKAEEEAKRKADAKLKEA
NVATSDQGNPKGRGKRGVPGELATPDKKENDAKSSDSSVGEETLPSSSLKSGKKVTEAEKKVEEAEKKAKDQKEEDRRNY
PTNTYKTLDLEIAESDVKVKEAELELVKEEAKEPRDEEKIKQAKEKVESKKAEATRLEKIKTDRKKAEEAKRKAAEEDKV
KEKPAEQPQPAPAPQPEKPAPKPEKPAEQPKAEKTDDQQAEEDYARRSEEEYNRLTQQQPPKTEKPAQPSTPKTGWKQEN
GMWYFYNTDGSMATGWLQNNGSWYYLNSNGAMATGWLQNNGSWYYLNANGAMATGWLQNNGSWYYLNSNGAMATGWLQYN
GSWYYLNANGDMATGWLQNNGSWYYLNANGAMATGWAKVNSSWYYLNANGAMATGWAKVNSSWYYLNANGDMATGWVKDG
DTWYYLEASGAMKASQWFKVSDKWYYVNGSGALAVNTTVDGYGVNANGEWVN
>Mature_692_residues
MFASKNERKVHYSIRKFSIGVASVAVASLFMGSVVHATENEGTTQVATSSNKANKSQTEHMKAAKQVDEYIKKMLQLDRR
KHTQNVGLLTKLGAIKTEYLHGLSVSKEKSEAELPSKIKAELDAAFENFKKDTLKPGEKVAEAKKKAEDQKEEDRRNYPT
NTYKTLELEIAEFDVKVKEAELELVKEEAKEPRDEEKIKQAKEKVESKKAEATRLENIKTDRKKAEEEAKRKADAKLKEA
NVATSDQGNPKGRGKRGVPGELATPDKKENDAKSSDSSVGEETLPSSSLKSGKKVTEAEKKVEEAEKKAKDQKEEDRRNY
PTNTYKTLDLEIAESDVKVKEAELELVKEEAKEPRDEEKIKQAKEKVESKKAEATRLEKIKTDRKKAEEAKRKAAEEDKV
KEKPAEQPQPAPAPQPEKPAPKPEKPAEQPKAEKTDDQQAEEDYARRSEEEYNRLTQQQPPKTEKPAQPSTPKTGWKQEN
GMWYFYNTDGSMATGWLQNNGSWYYLNSNGAMATGWLQNNGSWYYLNANGAMATGWLQNNGSWYYLNSNGAMATGWLQYN
GSWYYLNANGDMATGWLQNNGSWYYLNANGAMATGWAKVNSSWYYLNANGAMATGWAKVNSSWYYLNANGDMATGWVKDG
DTWYYLEASGAMKASQWFKVSDKWYYVNGSGALAVNTTVDGYGVNANGEWVN

Specific function: Plays an important role in cell wall degradation and cell separation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 15 cell wall-binding repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018337
- InterPro:   IPR013338
- InterPro:   IPR002901 [H]

Pfam domain/function: PF01473 CW_binding_1; PF01832 Glucosaminidase [H]

EC number: =3.2.1.96 [H]

Molecular weight: Translated: 77802; Mature: 77802

Theoretical pI: Translated: 8.60; Mature: 8.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFASKNERKVHYSIRKFSIGVASVAVASLFMGSVVHATENEGTTQVATSSNKANKSQTEH
CCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEECCCCCCHHHHHH
MKAAKQVDEYIKKMLQLDRRKHTQNVGLLTKLGAIKTEYLHGLSVSKEKSEAELPSKIKA
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHHCCCHHHHH
ELDAAFENFKKDTLKPGEKVAEAKKKAEDQKEEDRRNYPTNTYKTLELEIAEFDVKVKEA
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECEEEHHH
ELELVKEEAKEPRDEEKIKQAKEKVESKKAEATRLENIKTDRKKAEEEAKRKADAKLKEA
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NVATSDQGNPKGRGKRGVPGELATPDKKENDAKSSDSSVGEETLPSSSLKSGKKVTEAEK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHCCCHHHHHHH
KVEEAEKKAKDQKEEDRRNYPTNTYKTLDLEIAESDVKVKEAELELVKEEAKEPRDEEKI
HHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHH
KQAKEKVESKKAEATRLEKIKTDRKKAEEAKRKAAEEDKVKEKPAEQPQPAPAPQPEKPA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PKPEKPAEQPKAEKTDDQQAEEDYARRSEEEYNRLTQQQPPKTEKPAQPSTPKTGWKQEN
CCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
GMWYFYNTDGSMATGWLQNNGSWYYLNSNGAMATGWLQNNGSWYYLNANGAMATGWLQNN
CEEEEECCCCCEEEEEEECCCCEEEECCCCCEEEEEEECCCCEEEEECCCCEEEEEEECC
GSWYYLNSNGAMATGWLQYNGSWYYLNANGDMATGWLQNNGSWYYLNANGAMATGWAKVN
CEEEEECCCCCEEEEEEEECCEEEEEECCCCEEEEEEECCCCEEEEECCCCEEECEEEEC
SSWYYLNANGAMATGWAKVNSSWYYLNANGDMATGWVKDGDTWYYLEASGAMKASQWFKV
CCEEEEECCCCEEECEEEECCCEEEEECCCCEEEEEEECCCEEEEEECCCCCCCCCEEEE
SDKWYYVNGSGALAVNTTVDGYGVNANGEWVN
CCEEEEECCCCEEEEEEEECCEEECCCCCCCC
>Mature Secondary Structure
MFASKNERKVHYSIRKFSIGVASVAVASLFMGSVVHATENEGTTQVATSSNKANKSQTEH
CCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEECCCCCCHHHHHH
MKAAKQVDEYIKKMLQLDRRKHTQNVGLLTKLGAIKTEYLHGLSVSKEKSEAELPSKIKA
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHHCCCHHHHH
ELDAAFENFKKDTLKPGEKVAEAKKKAEDQKEEDRRNYPTNTYKTLELEIAEFDVKVKEA
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECEEEHHH
ELELVKEEAKEPRDEEKIKQAKEKVESKKAEATRLENIKTDRKKAEEEAKRKADAKLKEA
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NVATSDQGNPKGRGKRGVPGELATPDKKENDAKSSDSSVGEETLPSSSLKSGKKVTEAEK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHCCCHHHHHHH
KVEEAEKKAKDQKEEDRRNYPTNTYKTLDLEIAESDVKVKEAELELVKEEAKEPRDEEKI
HHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHH
KQAKEKVESKKAEATRLEKIKTDRKKAEEAKRKAAEEDKVKEKPAEQPQPAPAPQPEKPA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PKPEKPAEQPKAEKTDDQQAEEDYARRSEEEYNRLTQQQPPKTEKPAQPSTPKTGWKQEN
CCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
GMWYFYNTDGSMATGWLQNNGSWYYLNSNGAMATGWLQNNGSWYYLNANGAMATGWLQNN
CEEEEECCCCCEEEEEEECCCCEEEECCCCCEEEEEEECCCCEEEEECCCCEEEEEEECC
GSWYYLNSNGAMATGWLQYNGSWYYLNANGDMATGWLQNNGSWYYLNANGAMATGWAKVN
CEEEEECCCCCEEEEEEEECCEEEEEECCCCEEEEEEECCCCEEEEECCCCEEECEEEEC
SSWYYLNANGAMATGWAKVNSSWYYLNANGDMATGWVKDGDTWYYLEASGAMKASQWFKV
CCEEEEECCCCEEECEEEECCCEEEEECCCCEEEEEEECCCEEEEEECCCCCCCCCEEEE
SDKWYYVNGSGALAVNTTVDGYGVNANGEWVN
CCEEEEECCCCEEEEEEEECCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10096093; 11544234 [H]