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The map label for this gene is yvdE [H]

Identifier: 225859829

GI number: 225859829

Start: 1986174

End: 1986863

Strand: Reverse

Name: yvdE [H]

Synonym: SP70585_2179

Alternate gene names: 225859829

Gene position: 1986863-1986174 (Counterclockwise)

Preceding gene: 225859830

Following gene: 225859828

Centisome position: 90.95

GC content: 42.17

Gene sequence:

>690_bases
ATGGCTAGAACGGTTGTAGGAGTTGCTGCAAATCTATGTCCCGTAGACGCAGAAGGCAAAATCATTCATTCATCTGTATC
TTGTAGATTCGCAGAGATCATTCGTCAAGTCGGTGGTCTCCCTTTAGTCATTCCTGTTGGTGATGAGTCAGTTGTACGTG
ATTATGTGGAAATGATTGACAAACTCATTTTGACAGGAGGCCAAAATGTTCATCCTCAGTTTTATGGAGAGAAAAAGACC
GTCGAAAGCGATGATTACAATCTGGTCCGTGACGAATTTGAATTGGCACTCTTGAAGGAAGCGCTTCGTCAGAATAAACC
AATTATGGCAATCTGTCGCGGTGTCCAACTTGTCAATGTTGCCTTTGGTGGAACCCTCAATCAAGAAATCGAAGGTCACT
GGCAAGGACTACCTTTCGGGACATCTCACTCTATTGAGACAGTAGAAGGAAGCGTGGTGGCTAAGCTATTTGGGAAAGAA
AGTCAGGTCAACTCAGTCCATCGTCAAAGCATTAAAGATTTGGCACCTAATTTCCGTGTAACTGCTATTGATTCAAGAGA
CCAAACTATTGAAGCGATTGAGTCTATCGACGAGCACCGCATTATCGGTTTACAGTGGCATCCAGAGTTTCTGGTTAATG
AAGAAGATGGCAATTTAGAATTATTTGAGTATTTATTGAATGAACTGTAA

Upstream 100 bases:

>100_bases
CATAAAAAATGTTTATCACAGCCTTAAAAAAACATATTAGACGAAAGTCATTTTGAGTGATATGATAGGACTATCGTTAG
TATTCGAAAGGAGAGGCATC

Downstream 100 bases:

>100_bases
CGATTGGAACATCTGGTCGTTCTTTCTTTTATTTTTTCAAAATTTTTAGAATGTGGCATTTTACGCAAACGTTTGAATTC
TGATAAAAATTGGAGAAATT

Product: glutamine amidotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 228

Protein sequence:

>229_residues
MARTVVGVAANLCPVDAEGKIIHSSVSCRFAEIIRQVGGLPLVIPVGDESVVRDYVEMIDKLILTGGQNVHPQFYGEKKT
VESDDYNLVRDEFELALLKEALRQNKPIMAICRGVQLVNVAFGGTLNQEIEGHWQGLPFGTSHSIETVEGSVVAKLFGKE
SQVNSVHRQSIKDLAPNFRVTAIDSRDQTIEAIESIDEHRIIGLQWHPEFLVNEEDGNLELFEYLLNEL

Sequences:

>Translated_229_residues
MARTVVGVAANLCPVDAEGKIIHSSVSCRFAEIIRQVGGLPLVIPVGDESVVRDYVEMIDKLILTGGQNVHPQFYGEKKT
VESDDYNLVRDEFELALLKEALRQNKPIMAICRGVQLVNVAFGGTLNQEIEGHWQGLPFGTSHSIETVEGSVVAKLFGKE
SQVNSVHRQSIKDLAPNFRVTAIDSRDQTIEAIESIDEHRIIGLQWHPEFLVNEEDGNLELFEYLLNEL
>Mature_228_residues
ARTVVGVAANLCPVDAEGKIIHSSVSCRFAEIIRQVGGLPLVIPVGDESVVRDYVEMIDKLILTGGQNVHPQFYGEKKTV
ESDDYNLVRDEFELALLKEALRQNKPIMAICRGVQLVNVAFGGTLNQEIEGHWQGLPFGTSHSIETVEGSVVAKLFGKES
QVNSVHRQSIKDLAPNFRVTAIDSRDQTIEAIESIDEHRIIGLQWHPEFLVNEEDGNLELFEYLLNEL

Specific function: Unknown

COG id: COG2071

COG function: function code R; Predicted glutamine amidotransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081871, Length=212, Percent_Identity=33.0188679245283, Blast_Score=99, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017926
- InterPro:   IPR011697 [H]

Pfam domain/function: PF07722 Peptidase_C26 [H]

EC number: NA

Molecular weight: Translated: 25492; Mature: 25361

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARTVVGVAANLCPVDAEGKIIHSSVSCRFAEIIRQVGGLPLVIPVGDESVVRDYVEMID
CCCCCEEHHHHCCCCCCCCCEEECHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHH
KLILTGGQNVHPQFYGEKKTVESDDYNLVRDEFELALLKEALRQNKPIMAICRGVQLVNV
HHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCEEEE
AFGGTLNQEIEGHWQGLPFGTSHSIETVEGSVVAKLFGKESQVNSVHRQSIKDLAPNFRV
EECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEE
TAIDSRDQTIEAIESIDEHRIIGLQWHPEFLVNEEDGNLELFEYLLNEL
EEECCCHHHHHHHHCCCCCEEEEEEECCCEEEECCCCCHHHHHHHHHHC
>Mature Secondary Structure 
ARTVVGVAANLCPVDAEGKIIHSSVSCRFAEIIRQVGGLPLVIPVGDESVVRDYVEMID
CCCCEEHHHHCCCCCCCCCEEECHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHH
KLILTGGQNVHPQFYGEKKTVESDDYNLVRDEFELALLKEALRQNKPIMAICRGVQLVNV
HHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCEEEE
AFGGTLNQEIEGHWQGLPFGTSHSIETVEGSVVAKLFGKESQVNSVHRQSIKDLAPNFRV
EECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEE
TAIDSRDQTIEAIESIDEHRIIGLQWHPEFLVNEEDGNLELFEYLLNEL
EEECCCHHHHHHHHCCCCCEEEEEEECCCEEEECCCCCHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11337471 [H]