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The map label for this gene is ybjZ [C]

Identifier: 225859770

GI number: 225859770

Start: 1924920

End: 1925882

Strand: Reverse

Name: ybjZ [C]

Synonym: SP70585_2100

Alternate gene names: 225859770

Gene position: 1925882-1924920 (Counterclockwise)

Preceding gene: 225859771

Following gene: 225859769

Centisome position: 88.15

GC content: 37.49

Gene sequence:

>963_bases
ATGAACATGTCAAATATTACTATAGATGGGCAAGAAATGGATCTGAGTCAAACGATGCCTTCTTATGCTCAAGTAGTGAG
TCTTTATGAGGATACAAGCATCTCTGTTAGTAGTAATGAGACGGACAAAGTGTTGGCTGGATCCCTCTATACTGATACAA
ATGAACAGGGATTAACGATTCCAAGCAGTTTACTAAAAAATTGGAATGAACAGACAGGAAAAAATTTGACAGCTAATGAT
CTTATTGGCAAATCAGTCTCAGCCAGCATTGTAGAAAGTGCTGCCGAAGCTAGTAAGATTGCTCAATTTCAAACGAAGAT
TGTACGTGTAATCAATGATGAAGATGACATGGAGGACAGCAACAGTTTCATGCTGTCTCATCAAATGGAAACGATTTTGA
AAGAGGCTGGATTTATGAAAGCTGTATCTTATTTTATCTTGGAACTCAAAGATCCATCACAGACAAAAGTAGTAACAGAA
GAATTACAGAAAAATAAGAAGTATACTGTGCTTTCTCAACAGAGAGTTCTTGATATTGTGATTACCTTTATTCGTGTTAT
TCAGGGATTATTGATTGTGCTTTCATCACAAGCTATTGTGGTAGCAGCGGTTATGATTGGTATTATTATTTACATCAATA
TCATGCAACGTTCCAAGGAAATAGGTGTCATGAAAGCAGTTGGTTATCAGAATCGTGATGTCAAAGGAATTTTTATTTAC
GAGGCTATCTGGATTGTAGGCATCGCCTTGCTGCTGGCATTTTTGGTTGCACAAGGGGTGGGAAGTTTGGCGAATGCGAT
TGTAAGTCACTTTTACCCATCCATCACTAAGGTTTTTGAATTAAATCTTTTATCTGTTTTAGGAACTCTAGTTTTCGCTC
TATTACTTGGTTATGTCTCAGCCTACTTCCCGGCGCGTAAGATTAGTAAAATGGATCCTGTAGAATCGTTACGCTATGAA
TAG

Upstream 100 bases:

>100_bases
CTTTTATGAGGCTCTTTTGTCTTGTTCTTGTTTCAATTGACTATAGTTCACGGATACAGTTGGGAAAGAAGCTATTAAAC
ATTTGGAGAGTCCTTTTGGG

Downstream 100 bases:

>100_bases
TAAGGGATTCCTTGATTTACAGTCTTAAAAAGAAACTAACATAGAAAAACAATGGCCATACTTGCAATTCAACTCAAATA
GTTGTATAATAGGTTTGTTG

Product: efflux ABC transporter, permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 320; Mature: 320

Protein sequence:

>320_residues
MNMSNITIDGQEMDLSQTMPSYAQVVSLYEDTSISVSSNETDKVLAGSLYTDTNEQGLTIPSSLLKNWNEQTGKNLTAND
LIGKSVSASIVESAAEASKIAQFQTKIVRVINDEDDMEDSNSFMLSHQMETILKEAGFMKAVSYFILELKDPSQTKVVTE
ELQKNKKYTVLSQQRVLDIVITFIRVIQGLLIVLSSQAIVVAAVMIGIIIYINIMQRSKEIGVMKAVGYQNRDVKGIFIY
EAIWIVGIALLLAFLVAQGVGSLANAIVSHFYPSITKVFELNLLSVLGTLVFALLLGYVSAYFPARKISKMDPVESLRYE

Sequences:

>Translated_320_residues
MNMSNITIDGQEMDLSQTMPSYAQVVSLYEDTSISVSSNETDKVLAGSLYTDTNEQGLTIPSSLLKNWNEQTGKNLTAND
LIGKSVSASIVESAAEASKIAQFQTKIVRVINDEDDMEDSNSFMLSHQMETILKEAGFMKAVSYFILELKDPSQTKVVTE
ELQKNKKYTVLSQQRVLDIVITFIRVIQGLLIVLSSQAIVVAAVMIGIIIYINIMQRSKEIGVMKAVGYQNRDVKGIFIY
EAIWIVGIALLLAFLVAQGVGSLANAIVSHFYPSITKVFELNLLSVLGTLVFALLLGYVSAYFPARKISKMDPVESLRYE
>Mature_320_residues
MNMSNITIDGQEMDLSQTMPSYAQVVSLYEDTSISVSSNETDKVLAGSLYTDTNEQGLTIPSSLLKNWNEQTGKNLTAND
LIGKSVSASIVESAAEASKIAQFQTKIVRVINDEDDMEDSNSFMLSHQMETILKEAGFMKAVSYFILELKDPSQTKVVTE
ELQKNKKYTVLSQQRVLDIVITFIRVIQGLLIVLSSQAIVVAAVMIGIIIYINIMQRSKEIGVMKAVGYQNRDVKGIFIY
EAIWIVGIALLLAFLVAQGVGSLANAIVSHFYPSITKVFELNLLSVLGTLVFALLLGYVSAYFPARKISKMDPVESLRYE

Specific function: Unknown

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-4 integral membrane protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003838 [H]

Pfam domain/function: PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 35364; Mature: 35364

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNMSNITIDGQEMDLSQTMPSYAQVVSLYEDTSISVSSNETDKVLAGSLYTDTNEQGLTI
CCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHCCCCCCCCCCCCCCC
PSSLLKNWNEQTGKNLTANDLIGKSVSASIVESAAEASKIAQFQTKIVRVINDEDDMEDS
HHHHHHCCHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
NSFMLSHQMETILKEAGFMKAVSYFILELKDPSQTKVVTEELQKNKKYTVLSQQRVLDIV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEHHHHHHHHHHH
ITFIRVIQGLLIVLSSQAIVVAAVMIGIIIYINIMQRSKEIGVMKAVGYQNRDVKGIFIY
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHH
EAIWIVGIALLLAFLVAQGVGSLANAIVSHFYPSITKVFELNLLSVLGTLVFALLLGYVS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AYFPARKISKMDPVESLRYE
HHCCHHHHCCCCCHHHHCCC
>Mature Secondary Structure
MNMSNITIDGQEMDLSQTMPSYAQVVSLYEDTSISVSSNETDKVLAGSLYTDTNEQGLTI
CCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHCCCCCCCCCCCCCCC
PSSLLKNWNEQTGKNLTANDLIGKSVSASIVESAAEASKIAQFQTKIVRVINDEDDMEDS
HHHHHHCCHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
NSFMLSHQMETILKEAGFMKAVSYFILELKDPSQTKVVTEELQKNKKYTVLSQQRVLDIV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEHHHHHHHHHHH
ITFIRVIQGLLIVLSSQAIVVAAVMIGIIIYINIMQRSKEIGVMKAVGYQNRDVKGIFIY
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHH
EAIWIVGIALLLAFLVAQGVGSLANAIVSHFYPSITKVFELNLLSVLGTLVFALLLGYVS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AYFPARKISKMDPVESLRYE
HHCCHHHHCCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]