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The map label for this gene is epsH [H]

Identifier: 225859525

GI number: 225859525

Start: 1687281

End: 1687640

Strand: Reverse

Name: epsH [H]

Synonym: SP70585_1815

Alternate gene names: 225859525

Gene position: 1687640-1687281 (Counterclockwise)

Preceding gene: 225859526

Following gene: 225859524

Centisome position: 77.25

GC content: 33.06

Gene sequence:

>360_bases
GTGGATGATAAAATTACGGTCATTGTACCAGTATACAATGTAGAAAACTATCTGAGGAAATGTCTAGATAGTATCATTTC
TCAAACATATAAAAATATTGAGATTGTTGTCGTTAATAATGGTTCTACGGATGCTTCAGGTGAAATTTGTAAAGAATTTT
CAGAAATGGATCACCGAATTCTCTATATAGAACAAGAAAATGCTGGTATTTCTGCCGCACGAAACACCGGTCTGAATAAT
ATGTCCGGAAATTATGTGACCTTTGTGGATTCAGATGATTGGATTGAGTTAGATTATGTAGAAACCCTATATAAAAAAAT
AACAGAATATCAAGCTGATATTGCAGTTGGGAATTACTAG

Upstream 100 bases:

>100_bases
ATTGGTTGCGAAACGCCGTAAACGTGATGAAGAAGAGTAAGACAACCTGTAAAGTTAGGCTAAACTAACTCGCGCACATA
AATCAAGGAGAAAATTGCTA

Downstream 100 bases:

>100_bases
ACTTGTTCGGTAACTGTAAAAAGTGTTATACTATTTTTATGGAAACAGTATACGACAAAGCACAAAAACTTAACTCAAAA
AACTTCAAACTATTGATTGG

Product: putative glycosyltransferase YibD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MDDKITVIVPVYNVENYLRKCLDSIISQTYKNIEIVVVNNGSTDASGEICKEFSEMDHRILYIEQENAGISAARNTGLNN
MSGNYVTFVDSDDWIELDYVETLYKKITEYQADIAVGNY

Sequences:

>Translated_119_residues
MDDKITVIVPVYNVENYLRKCLDSIISQTYKNIEIVVVNNGSTDASGEICKEFSEMDHRILYIEQENAGISAARNTGLNN
MSGNYVTFVDSDDWIELDYVETLYKKITEYQADIAVGNY
>Mature_119_residues
MDDKITVIVPVYNVENYLRKCLDSIISQTYKNIEIVVVNNGSTDASGEICKEFSEMDHRILYIEQENAGISAARNTGLNN
MSGNYVTFVDSDDWIELDYVETLYKKITEYQADIAVGNY

Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles. Required for biofilm maintenance [H]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1790044, Length=116, Percent_Identity=41.3793103448276, Blast_Score=95, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 13534; Mature: 13534

Theoretical pI: Translated: 4.02; Mature: 4.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDKITVIVPVYNVENYLRKCLDSIISQTYKNIEIVVVNNGSTDASGEICKEFSEMDHRI
CCCCEEEEEEECCHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHHHCCCEE
LYIEQENAGISAARNTGLNNMSGNYVTFVDSDDWIELDYVETLYKKITEYQADIAVGNY
EEEEECCCCCCHHHCCCCCCCCCCEEEEECCCCCEEHHHHHHHHHHHHHHHHCEECCCC
>Mature Secondary Structure
MDDKITVIVPVYNVENYLRKCLDSIISQTYKNIEIVVVNNGSTDASGEICKEFSEMDHRI
CCCCEEEEEEECCHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHHHCCCEE
LYIEQENAGISAARNTGLNNMSGNYVTFVDSDDWIELDYVETLYKKITEYQADIAVGNY
EEEEECCCCCCHHHCCCCCCCCCCEEEEECCCCCEEHHHHHHHHHHHHHHHHCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969506; 9384377 [H]