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The map label for this gene is ybgI [C]

Identifier: 225859365

GI number: 225859365

Start: 1523256

End: 1524053

Strand: Reverse

Name: ybgI [C]

Synonym: SP70585_1650

Alternate gene names: 225859365

Gene position: 1524053-1523256 (Counterclockwise)

Preceding gene: 225859366

Following gene: 225859364

Centisome position: 69.76

GC content: 44.49

Gene sequence:

>798_bases
ATGTTAGCAAGTGAAGTGATCCAAGCTTATGAAGCCTTTTGCCCTCAGGAATTTTCTATGGAGGGAGACAGCCGTGGTCT
GCAAATTGGCACTTTAGACAAGGGTATCCAAAGGGTCATGGTTGCCCTCGATATTCGTGAAGAGACAGTGGCAGAGGCCA
TTGAAAAGGGTGTGGACTTGATTATCGTCAAGCACGCGCCTATCTTTCGTCCTATCAAGGACTTGCTTGCCAGCCGTCCG
CAAAATCAGATTTACATCGACCTGATTAAGCATGACATCGCAGTTTATGTCAGCCATACCAATATTGATATCGTTGAAAA
TGGGCTCAATGACTGGTTTTGTCAGATGCTAGAAATCGAGGAGACGACTTATCTGCAGGAAACAGGTCCAGAACGTGGAA
TTGGACGTATTGGGAATATTCAGCCTCAGACATTTTGGGAATTGGCCCAACAGGTCAAGCAAGTCTTTGACCTAGATAGC
CTTCGAATGGTGCATTATCAAGAGAATGATTTGCAGAAGCCTATTTCAAGAGTAGCAATTTGTGGTGGAAGCGGGCAGTC
TTTCTATAAGGATGCTTTGGCAAAGGGGGCAGATGTCTATATCACTGGTGATATCTACTACCATACTGCTCAGGATATGC
TGTCTGATGGCTTGTTAGCATTGGATCCAGGTCACTATATCGAAGTGCTTTTTGTGGAAAAAATCGCAGCACTCCTTACT
CAATGGAAAGAGAAAAAAGGCTGGGAACTAGAGATTTTACCTAGTCAAGCATCGACCAATCCTTTCCGTCATATCTAG

Upstream 100 bases:

>100_bases
GCTGAGAAGCTAGAGTTCGCCCTCGGACAAATCCCAGAAAAAAATCTGGAAGAACGTCAAGTTCTAGTAGATAAGATTCA
AGCTATCAAGGAGGTGCTCC

Downstream 100 bases:

>100_bases
TTAGAAAGTGAAGACAATGAAAAAAGTTGCCATTATTGGAGCAGGAATTGTGGGAGCAACAGCTGCCTACTACCTCTCGA
GAGAAAGTGACCTAGAGGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MLASEVIQAYEAFCPQEFSMEGDSRGLQIGTLDKGIQRVMVALDIREETVAEAIEKGVDLIIVKHAPIFRPIKDLLASRP
QNQIYIDLIKHDIAVYVSHTNIDIVENGLNDWFCQMLEIEETTYLQETGPERGIGRIGNIQPQTFWELAQQVKQVFDLDS
LRMVHYQENDLQKPISRVAICGGSGQSFYKDALAKGADVYITGDIYYHTAQDMLSDGLLALDPGHYIEVLFVEKIAALLT
QWKEKKGWELEILPSQASTNPFRHI

Sequences:

>Translated_265_residues
MLASEVIQAYEAFCPQEFSMEGDSRGLQIGTLDKGIQRVMVALDIREETVAEAIEKGVDLIIVKHAPIFRPIKDLLASRP
QNQIYIDLIKHDIAVYVSHTNIDIVENGLNDWFCQMLEIEETTYLQETGPERGIGRIGNIQPQTFWELAQQVKQVFDLDS
LRMVHYQENDLQKPISRVAICGGSGQSFYKDALAKGADVYITGDIYYHTAQDMLSDGLLALDPGHYIEVLFVEKIAALLT
QWKEKKGWELEILPSQASTNPFRHI
>Mature_265_residues
MLASEVIQAYEAFCPQEFSMEGDSRGLQIGTLDKGIQRVMVALDIREETVAEAIEKGVDLIIVKHAPIFRPIKDLLASRP
QNQIYIDLIKHDIAVYVSHTNIDIVENGLNDWFCQMLEIEETTYLQETGPERGIGRIGNIQPQTFWELAQQVKQVFDLDS
LRMVHYQENDLQKPISRVAICGGSGQSFYKDALAKGADVYITGDIYYHTAQDMLSDGLLALDPGHYIEVLFVEKIAALLT
QWKEKKGWELEILPSQASTNPFRHI

Specific function: Unknown

COG id: COG0327

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0135 (NIF3) family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6321217, Length=231, Percent_Identity=27.7056277056277, Blast_Score=82, Evalue=1e-16,
Organism=Drosophila melanogaster, GI19921430, Length=224, Percent_Identity=30.3571428571429, Blast_Score=91, Evalue=7e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002678 [H]

Pfam domain/function: PF01784 NIF3 [H]

EC number: NA

Molecular weight: Translated: 29997; Mature: 29997

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLASEVIQAYEAFCPQEFSMEGDSRGLQIGTLDKGIQRVMVALDIREETVAEAIEKGVDL
CCHHHHHHHHHHHCCHHCCCCCCCCCCEEECHHHHHHHHHHHHCCHHHHHHHHHHCCCCE
IIVKHAPIFRPIKDLLASRPQNQIYIDLIKHDIAVYVSHTNIDIVENGLNDWFCQMLEIE
EEECCCCCHHHHHHHHHCCCCCCEEEEEEECCEEEEEECCCCEEECCCHHHHHHHHHHHH
ETTYLQETGPERGIGRIGNIQPQTFWELAQQVKQVFDLDSLRMVHYQENDLQKPISRVAI
HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHEEEEECHHHHHHHHHHEEE
CGGSGQSFYKDALAKGADVYITGDIYYHTAQDMLSDGLLALDPGHYIEVLFVEKIAALLT
ECCCCHHHHHHHHHCCCCEEEECCEEEECHHHHHHCCCEEECCCCCEEHHHHHHHHHHHH
QWKEKKGWELEILPSQASTNPFRHI
HHHHCCCCEEEEECCCCCCCCCCCC
>Mature Secondary Structure
MLASEVIQAYEAFCPQEFSMEGDSRGLQIGTLDKGIQRVMVALDIREETVAEAIEKGVDL
CCHHHHHHHHHHHCCHHCCCCCCCCCCEEECHHHHHHHHHHHHCCHHHHHHHHHHCCCCE
IIVKHAPIFRPIKDLLASRPQNQIYIDLIKHDIAVYVSHTNIDIVENGLNDWFCQMLEIE
EEECCCCCHHHHHHHHHCCCCCCEEEEEEECCEEEEEECCCCEEECCCHHHHHHHHHHHH
ETTYLQETGPERGIGRIGNIQPQTFWELAQQVKQVFDLDSLRMVHYQENDLQKPISRVAI
HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHEEEEECHHHHHHHHHHEEE
CGGSGQSFYKDALAKGADVYITGDIYYHTAQDMLSDGLLALDPGHYIEVLFVEKIAALLT
ECCCCHHHHHHHHHCCCCEEEECCEEEECHHHHHHCCCEEECCCCCEEHHHHHHHHHHHH
QWKEKKGWELEILPSQASTNPFRHI
HHHHCCCCEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11463916 [H]