| Definition | Streptococcus pneumoniae 70585, complete genome. |
|---|---|
| Accession | NC_012468 |
| Length | 2,184,682 |
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The map label for this gene is 225859254
Identifier: 225859254
GI number: 225859254
Start: 1413472
End: 1414005
Strand: Reverse
Name: 225859254
Synonym: SP70585_1534
Alternate gene names: NA
Gene position: 1414005-1413472 (Counterclockwise)
Preceding gene: 225859255
Following gene: 225859253
Centisome position: 64.72
GC content: 39.7
Gene sequence:
>534_bases ATGACGAGCTTTAAGGAACAAGAGCCAGAGAAAGTCGCTGAGTTTCTTGATATTTTGGATAACCTAAAAGATTTACCAAT CGTATATATTGACGAAACAGGAATCGACCGCTACCTCTATCGTCCTTATGCAGGGGCTCCTAGAGGGGAGAAAGTCTATG AAAAGATTAGCGGACGTCGTTTTGAGCGAACTTCAATTGTTGCAGGACAAGTAGACGGAGAGTTTATAGCTCCCATGATT TACAAGAAAAGCATGACAAGCGATTTCTTTGTGGAGTGGTTCAAAACGCAACTCCTACCTGCTTTGAAGACACCTCATGT TATTGTCATGGGCAATGCTAGTTTTCATCCCAAGAACATTTTGGATGAACTCTGCATCCAAGATAAACACTTTTTCTTAC CTCTACCACCTTATTCACCGGATTTGAATCCTATTGAGCAAGCTTGGGCTATCTTGAAAAAGAAAGTGACGGATTTATTA AGGGAAGTTCCAACTATTTTTGAATGTTTGGAATGCTTTTTTAAAACTAGATGA
Upstream 100 bases:
>100_bases CATCCAGATGCTTTTTTACGGGAAATTGCGGCACATTTTGATTGTGCTGTTCCTTCAGTATGGGCAGCTTTAAAGCAGAT TAAGGTCACTTTAAAAAAAG
Downstream 100 bases:
>100_bases CTATAACGGTTCTAAAGGAACCTATCGAGTAGTCATTAAAACTAAGGATACTGCTGGTTAAGAGAAGACGGTATACAATC AAACCATTCACCGTGTAGCC
Product: transposase
Products: NA
Alternate protein names: Transposase Of Insertion Sequence; ISSpo6 Transposase OrfB; LOW QUALITY PROTEIN Transposase; Degenerate Transposase; ISHde6 Transposase OrfB; Transposase Family Protein; Transposase IS; Transposase And Inactivated Derivatives-Like Protein; ISRin2 Transposase OrfB; ISSoc4 Transposase OrfAB; ISHde1 Transposase OrfB; Transposase And Inactivated Derivative
Number of amino acids: Translated: 177; Mature: 176
Protein sequence:
>177_residues MTSFKEQEPEKVAEFLDILDNLKDLPIVYIDETGIDRYLYRPYAGAPRGEKVYEKISGRRFERTSIVAGQVDGEFIAPMI YKKSMTSDFFVEWFKTQLLPALKTPHVIVMGNASFHPKNILDELCIQDKHFFLPLPPYSPDLNPIEQAWAILKKKVTDLL REVPTIFECLECFFKTR
Sequences:
>Translated_177_residues MTSFKEQEPEKVAEFLDILDNLKDLPIVYIDETGIDRYLYRPYAGAPRGEKVYEKISGRRFERTSIVAGQVDGEFIAPMI YKKSMTSDFFVEWFKTQLLPALKTPHVIVMGNASFHPKNILDELCIQDKHFFLPLPPYSPDLNPIEQAWAILKKKVTDLL REVPTIFECLECFFKTR >Mature_176_residues TSFKEQEPEKVAEFLDILDNLKDLPIVYIDETGIDRYLYRPYAGAPRGEKVYEKISGRRFERTSIVAGQVDGEFIAPMIY KKSMTSDFFVEWFKTQLLPALKTPHVIVMGNASFHPKNILDELCIQDKHFFLPLPPYSPDLNPIEQAWAILKKKVTDLLR EVPTIFECLECFFKTR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20581; Mature: 20450
Theoretical pI: Translated: 5.77; Mature: 5.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSFKEQEPEKVAEFLDILDNLKDLPIVYIDETGIDRYLYRPYAGAPRGEKVYEKISGRR CCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHCCCCCCCCCHHHHHHHHCCCC FERTSIVAGQVDGEFIAPMIYKKSMTSDFFVEWFKTQLLPALKTPHVIVMGNASFHPKNI CHHHHEEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHH LDELCIQDKHFFLPLPPYSPDLNPIEQAWAILKKKVTDLLREVPTIFECLECFFKTR HHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TSFKEQEPEKVAEFLDILDNLKDLPIVYIDETGIDRYLYRPYAGAPRGEKVYEKISGRR CCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHCCCCCCCCCHHHHHHHHCCCC FERTSIVAGQVDGEFIAPMIYKKSMTSDFFVEWFKTQLLPALKTPHVIVMGNASFHPKNI CHHHHEEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHH LDELCIQDKHFFLPLPPYSPDLNPIEQAWAILKKKVTDLLREVPTIFECLECFFKTR HHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA