Click here to switch to the map view.

The map label for this gene is 225859182

Identifier: 225859182

GI number: 225859182

Start: 1349146

End: 1349535

Strand: Reverse

Name: 225859182

Synonym: SP70585_1456

Alternate gene names: NA

Gene position: 1349535-1349146 (Counterclockwise)

Preceding gene: 225859183

Following gene: 225859180

Centisome position: 61.77

GC content: 39.74

Gene sequence:

>390_bases
ATGGTAAAAAGACGTATAAGGAGAGGGACGAGAGAACCTGAAAAAGTTGTTGTTCCTGAGCAATCATCTATTCCTTCGTA
TCCTGTATCTGTTACATCTAACCAAGGAACAGATGTAGCAGTAGAACCAGCTAAAGCAGTTGCTCCAACAACAGGCTGGA
AACAAGAAAATGGTATGTGGTATTTTTATAATACTGATGGTTCCATGGCAACAGGTTGGGTACAAGTTAATGGTTCATGG
TACTACCTCAACAGCAACGGTTCTATGAAAGTTAATCAATGGTTCCAAGTTGGTGGTAAATGGTATTATGTAAATGCATC
GGGTGAGTTAGCGGTCAATACAAGTATAGATGGCTATAGAGTCAATGATAATGGTGAATGGGTGCGTTAA

Upstream 100 bases:

>100_bases
AGTAGGAGAAATTGGTAAAATTACTCTTACTACAATCTATGCTGTAGATGAACGTGATGGAACAATTGAAGAAACTACTT
CTCGTCAAATTACTAAAGAG

Downstream 100 bases:

>100_bases
CAGATTCCTCCCTGAGACAAAATTGATAATAGTATGTCTGAATATATAATTATATATAAAAAGCTATAGATAAGGTCATC
TTATAGCGACTATAAAAAAG

Product: choline binding protein

Products: NA

Alternate protein names: Surface Protein PspA; Pneumococcal Surface Protein A; Cell Wall Hydrolase/Autolysin; Collagenolytic Protease; Glycoside Hydrolase Family Protein; Surface Protein A; Lytic Transglycosylase Catalytic; Endo-Beta-N-Acetylglucosaminidase; Protective Antigen SpaA-Like Protein; Glycoside Hydrolase Family 3 Protein; Dipeptidase; Dipeptidase B; CHAP Domain-Containing Protein; Mannosyl-Glycoprotein Endo-Beta-N-Acetylglucosaminidase; Regulator Of Chromosome Condensation; Cell Wall Surface Anchor Protein; SH3 Type 3 Domain-Containing Protein; Cna B Domain Protein

Number of amino acids: Translated: 129; Mature: 129

Protein sequence:

>129_residues
MVKRRIRRGTREPEKVVVPEQSSIPSYPVSVTSNQGTDVAVEPAKAVAPTTGWKQENGMWYFYNTDGSMATGWVQVNGSW
YYLNSNGSMKVNQWFQVGGKWYYVNASGELAVNTSIDGYRVNDNGEWVR

Sequences:

>Translated_129_residues
MVKRRIRRGTREPEKVVVPEQSSIPSYPVSVTSNQGTDVAVEPAKAVAPTTGWKQENGMWYFYNTDGSMATGWVQVNGSW
YYLNSNGSMKVNQWFQVGGKWYYVNASGELAVNTSIDGYRVNDNGEWVR
>Mature_129_residues
MVKRRIRRGTREPEKVVVPEQSSIPSYPVSVTSNQGTDVAVEPAKAVAPTTGWKQENGMWYFYNTDGSMATGWVQVNGSW
YYLNSNGSMKVNQWFQVGGKWYYVNASGELAVNTSIDGYRVNDNGEWVR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14536; Mature: 14536

Theoretical pI: Translated: 9.26; Mature: 9.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKRRIRRGTREPEKVVVPEQSSIPSYPVSVTSNQGTDVAVEPAKAVAPTTGWKQENGMW
CCCCHHHCCCCCCCEEECCCCCCCCCCCEEEECCCCCEEEECCCHHCCCCCCCCCCCCEE
YFYNTDGSMATGWVQVNGSWYYLNSNGSMKVNQWFQVGGKWYYVNASGELAVNTSIDGYR
EEECCCCCEEEEEEEECCEEEEECCCCCEEEEHEEEECCEEEEEECCCCEEEECCCCCEE
VNDNGEWVR
ECCCCCEEC
>Mature Secondary Structure
MVKRRIRRGTREPEKVVVPEQSSIPSYPVSVTSNQGTDVAVEPAKAVAPTTGWKQENGMW
CCCCHHHCCCCCCCEEECCCCCCCCCCCEEEECCCCCEEEECCCHHCCCCCCCCCCCCEE
YFYNTDGSMATGWVQVNGSWYYLNSNGSMKVNQWFQVGGKWYYVNASGELAVNTSIDGYR
EEECCCCCEEEEEEEECCEEEEECCCCCEEEEHEEEECCEEEEEECCCCEEEECCCCCEE
VNDNGEWVR
ECCCCCEEC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA