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The map label for this gene is nanA [H]

Identifier: 225859102

GI number: 225859102

Start: 1270824

End: 1271741

Strand: Reverse

Name: nanA [H]

Synonym: SP70585_1374

Alternate gene names: 225859102

Gene position: 1271741-1270824 (Counterclockwise)

Preceding gene: 225859103

Following gene: 225859101

Centisome position: 58.21

GC content: 43.14

Gene sequence:

>918_bases
ATGTCAGATTTGAAAAAATACGAAGGTGTCATTCCAGCCTTCTACGCATGTTATGATGAGCAAGGAGAAGTAAGTCCAGA
GCGTACGCGTGCCTTGGTTCAATACTTCATTGATAAAGGTGTTCAAGGTCTTTATGTCAATGGTTCTTCTGGTGAATGTA
TCTACCAAAGCGTTGAAGATCGCAAGTTGATTTTGGAAGAAGTCATGGCGGTAGCCAAAGGTAAATTGACCATTATTGCC
CATGTTGCTTGCAATAATACTAAAGATAGTATGGAACTTGTTCGCCATGCTGAAAGCTTGGGAGTAGATGCTATTGCAAC
GATTCCACCAATTTACTTCCGCTTGCCAGAATACTCAGTTGCCAAATACTGGAACGATATCAGTTCTGCAGCTCCAAACA
CAGACTACGTGATTTACAACATTCCTCAATTGGCAGGGGTTGCTTTGACTCCAAGCCTTTACACAGAAATGTTGAAAAAT
CCTCGTGTTATCGGTGTTAAGAACTCTTCTATGCCAGTTCAAGATATCCAAACCTTTGTCAGCCTTGGTGGGGAAGACCA
TATCGTCTTTAATGGTCCTGATGAGCAGTTTCTAGGAGGACGCCTCATGGGTGCTAGGGCTGGTATCGGTGGTACTTATG
GTGCTATGCCAGAACTCTTCTTGAAACTCAATCAGTTGATTGCGGATAAGGACCTAGAAACAGCGCGTGAATTGCAGTAT
GCTATCAACGCAATCATTGGTAAACTCACTTCTGCTCATGGAAATATGTACGGTGTCATCAAAGAAGTTTTGAAAATCAA
TGAAGGCTTGACTATTGGATCTGTTCGTTCACCATTGACACCAGTGACTGAAGAAGATCGTCCAGTTGTAGAAGCGGCTG
CAGCCTTGATTCGTGAAACCAAGGAGCGCTTCCTCTAA

Upstream 100 bases:

>100_bases
AAGGGAAACATACTTGAATTGCGATTAGAGGAATTAGTCCCATATTCGTTCTCAAGTCTAGAAATGTAATTACGTAGTAT
GAAATAAGGAGAAAAAAACA

Downstream 100 bases:

>100_bases
TCCATAAGGAGGTATTTATGACACACTACGTTGTCAATCCAGAGGTGGTCATTCTCGGGGGTGGTATCATGGGACAAGAA
GCTATCCTCAAACCAAAGAT

Product: N-acetylneuraminate lyase

Products: NA

Alternate protein names: N-acetylneuraminate pyruvate-lyase; N-acetylneuraminic acid aldolase; Sialate lyase; Sialic acid aldolase; Sialic acid lyase [H]

Number of amino acids: Translated: 305; Mature: 304

Protein sequence:

>305_residues
MSDLKKYEGVIPAFYACYDEQGEVSPERTRALVQYFIDKGVQGLYVNGSSGECIYQSVEDRKLILEEVMAVAKGKLTIIA
HVACNNTKDSMELVRHAESLGVDAIATIPPIYFRLPEYSVAKYWNDISSAAPNTDYVIYNIPQLAGVALTPSLYTEMLKN
PRVIGVKNSSMPVQDIQTFVSLGGEDHIVFNGPDEQFLGGRLMGARAGIGGTYGAMPELFLKLNQLIADKDLETARELQY
AINAIIGKLTSAHGNMYGVIKEVLKINEGLTIGSVRSPLTPVTEEDRPVVEAAAALIRETKERFL

Sequences:

>Translated_305_residues
MSDLKKYEGVIPAFYACYDEQGEVSPERTRALVQYFIDKGVQGLYVNGSSGECIYQSVEDRKLILEEVMAVAKGKLTIIA
HVACNNTKDSMELVRHAESLGVDAIATIPPIYFRLPEYSVAKYWNDISSAAPNTDYVIYNIPQLAGVALTPSLYTEMLKN
PRVIGVKNSSMPVQDIQTFVSLGGEDHIVFNGPDEQFLGGRLMGARAGIGGTYGAMPELFLKLNQLIADKDLETARELQY
AINAIIGKLTSAHGNMYGVIKEVLKINEGLTIGSVRSPLTPVTEEDRPVVEAAAALIRETKERFL
>Mature_304_residues
SDLKKYEGVIPAFYACYDEQGEVSPERTRALVQYFIDKGVQGLYVNGSSGECIYQSVEDRKLILEEVMAVAKGKLTIIAH
VACNNTKDSMELVRHAESLGVDAIATIPPIYFRLPEYSVAKYWNDISSAAPNTDYVIYNIPQLAGVALTPSLYTEMLKNP
RVIGVKNSSMPVQDIQTFVSLGGEDHIVFNGPDEQFLGGRLMGARAGIGGTYGAMPELFLKLNQLIADKDLETARELQYA
INAIIGKLTSAHGNMYGVIKEVLKINEGLTIGSVRSPLTPVTEEDRPVVEAAAALIRETKERFL

Specific function: Catalyzes the cleavage of N-acetylneuraminic acid (sialic acid) to form pyruvate and N-acetylmannosamine via a Schiff base intermediate [H]

COG id: COG0329

COG function: function code EM; Dihydrodipicolinate synthase/N-acetylneuraminate lyase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DHDPS family. NanA subfamily [H]

Homologues:

Organism=Homo sapiens, GI13540533, Length=302, Percent_Identity=29.4701986754967, Blast_Score=114, Evalue=9e-26,
Organism=Escherichia coli, GI1789620, Length=293, Percent_Identity=32.0819112627986, Blast_Score=155, Evalue=4e-39,
Organism=Escherichia coli, GI87082415, Length=240, Percent_Identity=26.6666666666667, Blast_Score=112, Evalue=4e-26,
Organism=Escherichia coli, GI1786463, Length=284, Percent_Identity=25.3521126760563, Blast_Score=94, Evalue=9e-21,
Organism=Escherichia coli, GI1788823, Length=289, Percent_Identity=22.1453287197232, Blast_Score=82, Evalue=6e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR002220
- InterPro:   IPR020625
- InterPro:   IPR020624
- InterPro:   IPR005264 [H]

Pfam domain/function: PF00701 DHDPS [H]

EC number: =4.1.3.3 [H]

Molecular weight: Translated: 33455; Mature: 33324

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDLKKYEGVIPAFYACYDEQGEVSPERTRALVQYFIDKGVQGLYVNGSSGECIYQSVED
CCCHHHHCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHH
RKLILEEVMAVAKGKLTIIAHVACNNTKDSMELVRHAESLGVDAIATIPPIYFRLPEYSV
HHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHCCCCHHHHCCCCEEECCCHHH
AKYWNDISSAAPNTDYVIYNIPQLAGVALTPSLYTEMLKNPRVIGVKNSSMPVQDIQTFV
HHHHHHHHHCCCCCCEEEEECHHHCCEEECHHHHHHHHCCCCEEEECCCCCCHHHHHHHH
SLGGEDHIVFNGPDEQFLGGRLMGARAGIGGTYGAMPELFLKLNQLIADKDLETARELQY
HCCCCCEEEECCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHH
AINAIIGKLTSAHGNMYGVIKEVLKINEGLTIGSVRSPLTPVTEEDRPVVEAAAALIRET
HHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHH
KERFL
HHHCC
>Mature Secondary Structure 
SDLKKYEGVIPAFYACYDEQGEVSPERTRALVQYFIDKGVQGLYVNGSSGECIYQSVED
CCHHHHCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHH
RKLILEEVMAVAKGKLTIIAHVACNNTKDSMELVRHAESLGVDAIATIPPIYFRLPEYSV
HHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHCCCCHHHHCCCCEEECCCHHH
AKYWNDISSAAPNTDYVIYNIPQLAGVALTPSLYTEMLKNPRVIGVKNSSMPVQDIQTFV
HHHHHHHHHCCCCCCEEEEECHHHCCEEECHHHHHHHHCCCCEEEECCCCCCHHHHHHHH
SLGGEDHIVFNGPDEQFLGGRLMGARAGIGGTYGAMPELFLKLNQLIADKDLETARELQY
HCCCCCEEEECCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHH
AINAIIGKLTSAHGNMYGVIKEVLKINEGLTIGSVRSPLTPVTEEDRPVVEAAAALIRET
HHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHH
KERFL
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA