Click here to switch to the map view.

The map label for this gene is 225859078

Identifier: 225859078

GI number: 225859078

Start: 1251975

End: 1252757

Strand: Reverse

Name: 225859078

Synonym: SP70585_1347

Alternate gene names: NA

Gene position: 1252757-1251975 (Counterclockwise)

Preceding gene: 225859079

Following gene: 225859077

Centisome position: 57.34

GC content: 37.29

Gene sequence:

>783_bases
ATGGAACAATTACATTTTATCACAAAATTACTAGACATTAAAGACCCTAATATCCAGATTTTAGACATCATCAATAAGGA
TACACACAAGGAAATCATCGCCAAACTGGACTATGAAGCTCCATCTTGTCCTGAGTGCGGAAGTCAAATGAAGAAATATT
ACTTTCAAAAACCTTCTAAAATTCCTTATCTTGAAACAACTGGTATGCCTACTAGAATTCTCCTTAGAAAGCGTCGTTTC
AAGTGCTATCATTGTTCTAAAATGATGGTTGCTGAAACTTCTATCGTCAAGAAGAATCATCAAATCCCTCGTATCATCAA
CCAAAAGATTGCTCAAAAGTTAATTGAAAAGATTTCTATGACCGATATTGCCCATCAGCTTTCCATCTCAACTTCAACTG
TCATTCGAAAGCTCAATGACTTTCACTTTGAGCATGATTTTTCTCGGCTTCCAAAGATTATGTCTTGGGATGAGTATACC
TTCACTAAGGGAAAGATGAGTTTCATTGCGCAAGATTTTGATAATCTTAATATTATCACTGTTCTTGAAGGCAGAACACA
AGCTGTCATTCGAAATCACTTTCTTCGCTACGATAGAGCTGTCCGATGTCGCGTCAAAATTATTACTATGGATATGTTTA
GCCCTTACTATGACTTGGCTAAACAGCTTCGCTTTCAAATTTCTAGGCTCAGGCTGAAACAGTCTCCCAGACTGTTTCAC
TCCCGAATGCTAAAATCGTTCTTGATCGCTTTCACATTGTACAACATCTTAGCCGTGCTATGA

Upstream 100 bases:

>100_bases
TAACCCCCCTATGGATATTATGGAGCCTATTTTGTGTAGAAAAAAAGTCCCATATGACCTATAATGAAAAGCGACAAAAC
AACTCATTAGAAAGATTCAT

Downstream 100 bases:

>100_bases
GTCGTGTGCGTGTTCAAATTATGAATCAATTTCATCGAAAATCCCATGAATACAAGGCTATCAAGCGCTACTGGAAACTC
ATTCAACAGGATAGCCGTAA

Product: transposase

Products: NA

Alternate protein names: Truncated; Degenerate Transposase; Transposase IS; Transposase Putative; Transposase Subfamily; Transposase ISLasa4v; ISL3 Family Transposase; Truncated Transposase

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MEQLHFITKLLDIKDPNIQILDIINKDTHKEIIAKLDYEAPSCPECGSQMKKYYFQKPSKIPYLETTGMPTRILLRKRRF
KCYHCSKMMVAETSIVKKNHQIPRIINQKIAQKLIEKISMTDIAHQLSISTSTVIRKLNDFHFEHDFSRLPKIMSWDEYT
FTKGKMSFIAQDFDNLNIITVLEGRTQAVIRNHFLRYDRAVRCRVKIITMDMFSPYYDLAKQLRFQISRLRLKQSPRLFH
SRMLKSFLIAFTLYNILAVL

Sequences:

>Translated_260_residues
MEQLHFITKLLDIKDPNIQILDIINKDTHKEIIAKLDYEAPSCPECGSQMKKYYFQKPSKIPYLETTGMPTRILLRKRRF
KCYHCSKMMVAETSIVKKNHQIPRIINQKIAQKLIEKISMTDIAHQLSISTSTVIRKLNDFHFEHDFSRLPKIMSWDEYT
FTKGKMSFIAQDFDNLNIITVLEGRTQAVIRNHFLRYDRAVRCRVKIITMDMFSPYYDLAKQLRFQISRLRLKQSPRLFH
SRMLKSFLIAFTLYNILAVL
>Mature_260_residues
MEQLHFITKLLDIKDPNIQILDIINKDTHKEIIAKLDYEAPSCPECGSQMKKYYFQKPSKIPYLETTGMPTRILLRKRRF
KCYHCSKMMVAETSIVKKNHQIPRIINQKIAQKLIEKISMTDIAHQLSISTSTVIRKLNDFHFEHDFSRLPKIMSWDEYT
FTKGKMSFIAQDFDNLNIITVLEGRTQAVIRNHFLRYDRAVRCRVKIITMDMFSPYYDLAKQLRFQISRLRLKQSPRLFH
SRMLKSFLIAFTLYNILAVL

Specific function: Unknown

COG id: COG3464

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30843; Mature: 30843

Theoretical pI: Translated: 10.35; Mature: 10.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQLHFITKLLDIKDPNIQILDIINKDTHKEIIAKLDYEAPSCPECGSQMKKYYFQKPSK
CCHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCC
IPYLETTGMPTRILLRKRRFKCYHCSKMMVAETSIVKKNHQIPRIINQKIAQKLIEKISM
CCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
TDIAHQLSISTSTVIRKLNDFHFEHDFSRLPKIMSWDEYTFTKGKMSFIAQDFDNLNIIT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCEECCHHHHHHHHCCCCCEEEE
VLEGRTQAVIRNHFLRYDRAVRCRVKIITMDMFSPYYDLAKQLRFQISRLRLKQSPRLFH
EECCCHHHHHHHHHHHHCCCEEEEEEEEEEHHCCHHHHHHHHHHHHHHHHHHHCCHHHHH
SRMLKSFLIAFTLYNILAVL
HHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MEQLHFITKLLDIKDPNIQILDIINKDTHKEIIAKLDYEAPSCPECGSQMKKYYFQKPSK
CCHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCC
IPYLETTGMPTRILLRKRRFKCYHCSKMMVAETSIVKKNHQIPRIINQKIAQKLIEKISM
CCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
TDIAHQLSISTSTVIRKLNDFHFEHDFSRLPKIMSWDEYTFTKGKMSFIAQDFDNLNIIT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCEECCHHHHHHHHCCCCCEEEE
VLEGRTQAVIRNHFLRYDRAVRCRVKIITMDMFSPYYDLAKQLRFQISRLRLKQSPRLFH
EECCCHHHHHHHHHHHHCCCEEEEEEEEEEHHCCHHHHHHHHHHHHHHHHHHHCCHHHHH
SRMLKSFLIAFTLYNILAVL
HHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA