| Definition | Streptococcus pneumoniae 70585, complete genome. |
|---|---|
| Accession | NC_012468 |
| Length | 2,184,682 |
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The map label for this gene is 225858547
Identifier: 225858547
GI number: 225858547
Start: 714320
End: 714829
Strand: Reverse
Name: 225858547
Synonym: SP70585_0779
Alternate gene names: NA
Gene position: 714829-714320 (Counterclockwise)
Preceding gene: 225858548
Following gene: 225858541
Centisome position: 32.72
GC content: 38.82
Gene sequence:
>510_bases ATGTACCAAGATGAGGCTGGTTTCGGTAGAATCAGTAAACTGGGATCTTGTTGGGCTCCAATAGGAGTAGGTCCACATAT CCATAGTCACTATATACGAGAATTTCGCTATTGTTATGGAGCTGTTGATGCCCATACAGGCGAATCATTTTTCTTAATAG CTGGTGGATGTAATACTGAGTGGATGAACGCCTTTTTAGAAGAGCTTTCACAAGCTTATCCAGATGATTATCTTTTACTC GTTATGGACAATGCTATATGGCATAAATCAAGTATCTTAAAGATTCCGACTAATATTGGTTTTGCATTTATTCCTCCATA CACACCAGAGATGAACCCCATTGAACAAGTGTGGAAAGAGATTCGTAAACGTGGATTTAAGAATAAAGCCTTTCGAACTT TGGAAGATGTCATGAATCAACTTCAAGATGTCATACAAGGACTGGAGAAGGAGGTGATAAAGTCCATCGTTAATCGGAGA TGGACTAGAATGCTTTTTGAAAGCAGATGA
Upstream 100 bases:
>100_bases GCAGACGCTCAAACCATTGTAGTGTCTAAAAATAAAATCTCAATTCAAGAAGAAAAGAGAGCGCTTTAAAACCAGTAGAC GTTTTCGTAAGGTTCGCTTG
Downstream 100 bases:
>100_bases GTATTATATGCAATTTCTTTATATAAAAAGACCGGATTGCTCCGATCTTTCAATAGTTCATATTCTCAATTTCTATTTTA AAAATAGCTAAGGTTAACGT
Product: transposase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 169; Mature: 169
Protein sequence:
>169_residues MYQDEAGFGRISKLGSCWAPIGVGPHIHSHYIREFRYCYGAVDAHTGESFFLIAGGCNTEWMNAFLEELSQAYPDDYLLL VMDNAIWHKSSILKIPTNIGFAFIPPYTPEMNPIEQVWKEIRKRGFKNKAFRTLEDVMNQLQDVIQGLEKEVIKSIVNRR WTRMLFESR
Sequences:
>Translated_169_residues MYQDEAGFGRISKLGSCWAPIGVGPHIHSHYIREFRYCYGAVDAHTGESFFLIAGGCNTEWMNAFLEELSQAYPDDYLLL VMDNAIWHKSSILKIPTNIGFAFIPPYTPEMNPIEQVWKEIRKRGFKNKAFRTLEDVMNQLQDVIQGLEKEVIKSIVNRR WTRMLFESR >Mature_169_residues MYQDEAGFGRISKLGSCWAPIGVGPHIHSHYIREFRYCYGAVDAHTGESFFLIAGGCNTEWMNAFLEELSQAYPDDYLLL VMDNAIWHKSSILKIPTNIGFAFIPPYTPEMNPIEQVWKEIRKRGFKNKAFRTLEDVMNQLQDVIQGLEKEVIKSIVNRR WTRMLFESR
Specific function: Unknown
COG id: COG3335
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19638; Mature: 19638
Theoretical pI: Translated: 7.04; Mature: 7.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYQDEAGFGRISKLGSCWAPIGVGPHIHSHYIREFRYCYGAVDAHTGESFFLIAGGCNTE CCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHH WMNAFLEELSQAYPDDYLLLVMDNAIWHKSSILKIPTNIGFAFIPPYTPEMNPIEQVWKE HHHHHHHHHHHHCCCCEEEEEECCCHHCCCCEEECCCCCCEEEECCCCCCCCHHHHHHHH IRKRGFKNKAFRTLEDVMNQLQDVIQGLEKEVIKSIVNRRWTRMLFESR HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MYQDEAGFGRISKLGSCWAPIGVGPHIHSHYIREFRYCYGAVDAHTGESFFLIAGGCNTE CCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHH WMNAFLEELSQAYPDDYLLLVMDNAIWHKSSILKIPTNIGFAFIPPYTPEMNPIEQVWKE HHHHHHHHHHHHCCCCEEEEEECCCHHCCCCEEECCCCCCEEEECCCCCCCCHHHHHHHH IRKRGFKNKAFRTLEDVMNQLQDVIQGLEKEVIKSIVNRRWTRMLFESR HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]