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The map label for this gene is ygjR [C]

Identifier: 225853551

GI number: 225853551

Start: 2066258

End: 2067244

Strand: Direct

Name: ygjR [C]

Synonym: BMEA_A2184

Alternate gene names: 225853551

Gene position: 2066258-2067244 (Clockwise)

Preceding gene: 225853550

Following gene: 225853552

Centisome position: 97.2

GC content: 57.85

Gene sequence:

>987_bases
ATGTTTCGATGGGGTGTACTTTCCACCGCGAAAATCGGCGTCACACAGGTTATTCCAGCACTTGCTGCTTCGGATAACGG
TGTGGTCCATGCAATAGCAAGCCGCGACCATGCGCGCGCACGCGCGGTTGCCGGCCGCTTCGGCGCGCCGCTCGCTTTCG
GTTCCTATGAGGAATTGCTGGCCAGCAAGGAAGTGGACGGTGTCTATATTCCGCTGCCGACATCCCAGCATATCGAATGG
ACATTGAAGGCCGCCGAAGCAGGCAAGCATGTGCTGTGCGAAAAGCCCATTGCGCTTTGCGCGGGCGATATAGACCAGCT
CATCGAAGCGCGCGACAGGCATGGCGTCACGATTGCGGAAGCCTTAATGGTCTATTACCACCCGCAATGGATCAAGCTGC
GCGCGCTTCTGGCCGAAGGCGCGATTGGCAATCTGAGTCATGTGCAGGGTGTGTTTTCCTATTTCAATGTCGATCCCGGC
AATATGCGCAACCAGCCGGGCCTTGGCGGAGGGGCCTTGCCGGATATCGGTGTTTACCCAACCGTGGTGACGCGCATGGT
GACAGGCAGGGAGCCGCTCTCGGTGCGCGCTTCGGTGGAATATGATCCGGGTTTTGGAACCGACCGCTACGCCAATGTTT
CGGCCCGTTTCGACGGGTTCGACCTGACCTTCTATGTCGCGACGCAGCTTGCCGGCCGCCAATGCATGGTTTTCCATGGC
GATAAGGGCTTCATCGAGGTTTATGCGCCATTCAATACCGGCAAATATGGCCATGGCCGCATCACCCTGCACGATGCGAG
CCATATGCAGGCCACCGAATGGTCGTTTGGCGATGCAAACCACTATCAGCTTCAGGCGCAGAGCTTTGTTCGTGCGGCGC
GGGGTGAAAATGTGCCGCTCTTCTCGCTGGAAAATTCCAGGGCGAACCAGAAATTCATCGATGCGATTTATTCCGCGGGC
AGAAGCGGGGTGAGCGAGACTGTGTGA

Upstream 100 bases:

>100_bases
CAAGCAGACCGGCGGAGTGCTGCGCGGATAAAGCAATGAAAGCCTGAGCCCGCCGATTGGCGGGCTTTTGCTTGAAGGGA
ACGCACGGGAAGGGAAAAGC

Downstream 100 bases:

>100_bases
CGCCTGTAAAGAGTGCGGGGCAAGGAATCTGTTTTTGTCTGGCTCTTGTGACTTGCAGTGAAAAACTGCCTTTCTTATAT
ACGCCTCGCACAGGGCTTTG

Product: oxidoreductase Gfo

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 328; Mature: 328

Protein sequence:

>328_residues
MFRWGVLSTAKIGVTQVIPALAASDNGVVHAIASRDHARARAVAGRFGAPLAFGSYEELLASKEVDGVYIPLPTSQHIEW
TLKAAEAGKHVLCEKPIALCAGDIDQLIEARDRHGVTIAEALMVYYHPQWIKLRALLAEGAIGNLSHVQGVFSYFNVDPG
NMRNQPGLGGGALPDIGVYPTVVTRMVTGREPLSVRASVEYDPGFGTDRYANVSARFDGFDLTFYVATQLAGRQCMVFHG
DKGFIEVYAPFNTGKYGHGRITLHDASHMQATEWSFGDANHYQLQAQSFVRAARGENVPLFSLENSRANQKFIDAIYSAG
RSGVSETV

Sequences:

>Translated_328_residues
MFRWGVLSTAKIGVTQVIPALAASDNGVVHAIASRDHARARAVAGRFGAPLAFGSYEELLASKEVDGVYIPLPTSQHIEW
TLKAAEAGKHVLCEKPIALCAGDIDQLIEARDRHGVTIAEALMVYYHPQWIKLRALLAEGAIGNLSHVQGVFSYFNVDPG
NMRNQPGLGGGALPDIGVYPTVVTRMVTGREPLSVRASVEYDPGFGTDRYANVSARFDGFDLTFYVATQLAGRQCMVFHG
DKGFIEVYAPFNTGKYGHGRITLHDASHMQATEWSFGDANHYQLQAQSFVRAARGENVPLFSLENSRANQKFIDAIYSAG
RSGVSETV
>Mature_328_residues
MFRWGVLSTAKIGVTQVIPALAASDNGVVHAIASRDHARARAVAGRFGAPLAFGSYEELLASKEVDGVYIPLPTSQHIEW
TLKAAEAGKHVLCEKPIALCAGDIDQLIEARDRHGVTIAEALMVYYHPQWIKLRALLAEGAIGNLSHVQGVFSYFNVDPG
NMRNQPGLGGGALPDIGVYPTVVTRMVTGREPLSVRASVEYDPGFGTDRYANVSARFDGFDLTFYVATQLAGRQCMVFHG
DKGFIEVYAPFNTGKYGHGRITLHDASHMQATEWSFGDANHYQLQAQSFVRAARGENVPLFSLENSRANQKFIDAIYSAG
RSGVSETV

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Homo sapiens, GI7657212, Length=257, Percent_Identity=32.295719844358, Blast_Score=102, Evalue=6e-22,
Organism=Escherichia coli, GI145693182, Length=210, Percent_Identity=28.5714285714286, Blast_Score=65, Evalue=8e-12,
Organism=Drosophila melanogaster, GI24581117, Length=202, Percent_Identity=33.6633663366337, Blast_Score=106, Evalue=2e-23,
Organism=Drosophila melanogaster, GI24581115, Length=160, Percent_Identity=27.5, Blast_Score=65, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 35646; Mature: 35646

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRWGVLSTAKIGVTQVIPALAASDNGVVHAIASRDHARARAVAGRFGAPLAFGSYEELL
CCCCCCCCCHHCCHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCHHHHH
ASKEVDGVYIPLPTSQHIEWTLKAAEAGKHVLCEKPIALCAGDIDQLIEARDRHGVTIAE
HHCCCCEEEEECCCCCCEEEEEEECCCCCEEEECCCHHHHHCCHHHHHHHHHCCCCHHHH
ALMVYYHPQWIKLRALLAEGAIGNLSHVQGVFSYFNVDPGNMRNQPGLGGGALPDIGVYP
HHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHH
TVVTRMVTGREPLSVRASVEYDPGFGTDRYANVSARFDGFDLTFYVATQLAGRQCMVFHG
HHHHHHHCCCCCCEEEEEEEECCCCCCCCEEEEEEECCCCEEEEEEEEHHCCCEEEEEEC
DKGFIEVYAPFNTGKYGHGRITLHDASHMQATEWSFGDANHYQLQAQSFVRAARGENVPL
CCCEEEEEECCCCCCCCCCEEEEECCCCCEECCCCCCCCCCEEEHHHHHHHHHCCCCCEE
FSLENSRANQKFIDAIYSAGRSGVSETV
EEECCCCCHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MFRWGVLSTAKIGVTQVIPALAASDNGVVHAIASRDHARARAVAGRFGAPLAFGSYEELL
CCCCCCCCCHHCCHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCHHHHH
ASKEVDGVYIPLPTSQHIEWTLKAAEAGKHVLCEKPIALCAGDIDQLIEARDRHGVTIAE
HHCCCCEEEEECCCCCCEEEEEEECCCCCEEEECCCHHHHHCCHHHHHHHHHCCCCHHHH
ALMVYYHPQWIKLRALLAEGAIGNLSHVQGVFSYFNVDPGNMRNQPGLGGGALPDIGVYP
HHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHH
TVVTRMVTGREPLSVRASVEYDPGFGTDRYANVSARFDGFDLTFYVATQLAGRQCMVFHG
HHHHHHHCCCCCCEEEEEEEECCCCCCCCEEEEEEECCCCEEEEEEEEHHCCCEEEEEEC
DKGFIEVYAPFNTGKYGHGRITLHDASHMQATEWSFGDANHYQLQAQSFVRAARGENVPL
CCCEEEEEECCCCCCCCCCEEEEECCCCCEECCCCCCCCCCEEEHHHHHHHHHCCCCCEE
FSLENSRANQKFIDAIYSAGRSGVSETV
EEECCCCCHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7845353 [H]