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The map label for this gene is ydaL [C]

Identifier: 225853507

GI number: 225853507

Start: 2019111

End: 2019713

Strand: Direct

Name: ydaL [C]

Synonym: BMEA_A2138

Alternate gene names: 225853507

Gene position: 2019111-2019713 (Clockwise)

Preceding gene: 225853506

Following gene: 225853508

Centisome position: 94.99

GC content: 63.18

Gene sequence:

>603_bases
ATGCCCCCCAGATCCGAAAAGCCGGGCAAGGATTATCTGCGGGCCGAAGACCGCATCCTCTGGGAGACAGTGGCAAAAAC
TGCGCGCCCGCTTGCGGGGAAAAAAGCGGAGCCCGAGGCCCTTCCCGACTTCAAGGCCCTGATGGCGGAAGAACAGGAAA
AGCCCGGAGCAAAAATCGCACCGCCAGCCGGCGAGCCGGGCAGGAGCAGAAAAGGCTTTTCGGCGCCGGGCGAAATGCCG
ATCCAGCCGCTGGACAGGCCCACCCATCGAAAGATCGCCAAGGGCCGCGTCGATATCGAGGCGCGCATCGACCTGCACGG
TCTTACCCAGAACGAGGCGCATGGCCTTCTCTATGGCTTTCTGGTCAATGCCCATGCGCGCGGGTTGCGCCATGTCATGG
TGATTACCGGCAAAGGCCGCTCGTTGGGCAGTGAGGGCATTTTGCGCCAGGCCGTGCCGCACTGGTTCTCCACGCCGCTT
TTCCGGCTTCTGGTCAGCGCCTATGAGGATGCCGCGCGCCATCATGGAGGCCATGGCGCGCTTTATGTGCGGCTGCGCCG
CCAGACACGGCAGAACACGTTTGGAGGCATCGGCAGACGATGA

Upstream 100 bases:

>100_bases
CCGGTTCGGGCGATGAGGCGGGCAAGATTGCCGGCGGCATCAAGGATGAGGCGGATTTCTACGTGCTTGTGCCGCGCAAT
ATGGTCGGGGGGTGAAGCCC

Downstream 100 bases:

>100_bases
CGCCTTTCGGAAAGCGCTTGCGCGAACTGCGTGAGGAGCGCGGTGTTACGCAGAAGGAAATGGCGCAGGCGCTGCGCGTC
TCACCAGCCTATCTTTCGGC

Product: Smr protein/MutS2

Products: NA

Alternate protein names: Smr Domain-Containing Protein; Smr Family Protein; DNA Repair Protein Smr/MutS Family; Smr Protein; SMR/MUTS Family Protein; Smr/MutS Family Protein; Smr/MutS Family DNA Repair Protein; Smr Protein/Muts2-Like; DNA Repair Protein; Smr Protein/MutS2 Domain Protein; Smr Protein/MutS2 C-Terminal

Number of amino acids: Translated: 200; Mature: 199

Protein sequence:

>200_residues
MPPRSEKPGKDYLRAEDRILWETVAKTARPLAGKKAEPEALPDFKALMAEEQEKPGAKIAPPAGEPGRSRKGFSAPGEMP
IQPLDRPTHRKIAKGRVDIEARIDLHGLTQNEAHGLLYGFLVNAHARGLRHVMVITGKGRSLGSEGILRQAVPHWFSTPL
FRLLVSAYEDAARHHGGHGALYVRLRRQTRQNTFGGIGRR

Sequences:

>Translated_200_residues
MPPRSEKPGKDYLRAEDRILWETVAKTARPLAGKKAEPEALPDFKALMAEEQEKPGAKIAPPAGEPGRSRKGFSAPGEMP
IQPLDRPTHRKIAKGRVDIEARIDLHGLTQNEAHGLLYGFLVNAHARGLRHVMVITGKGRSLGSEGILRQAVPHWFSTPL
FRLLVSAYEDAARHHGGHGALYVRLRRQTRQNTFGGIGRR
>Mature_199_residues
PPRSEKPGKDYLRAEDRILWETVAKTARPLAGKKAEPEALPDFKALMAEEQEKPGAKIAPPAGEPGRSRKGFSAPGEMPI
QPLDRPTHRKIAKGRVDIEARIDLHGLTQNEAHGLLYGFLVNAHARGLRHVMVITGKGRSLGSEGILRQAVPHWFSTPLF
RLLVSAYEDAARHHGGHGALYVRLRRQTRQNTFGGIGRR

Specific function: Unknown

COG id: COG2840

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22137; Mature: 22006

Theoretical pI: Translated: 11.05; Mature: 11.05

Prosite motif: PS50828 SMR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPRSEKPGKDYLRAEDRILWETVAKTARPLAGKKAEPEALPDFKALMAEEQEKPGAKIA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCC
PPAGEPGRSRKGFSAPGEMPIQPLDRPTHRKIAKGRVDIEARIDLHGLTQNEAHGLLYGF
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEEEEECCCCCCCCHHHHHH
LVNAHARGLRHVMVITGKGRSLGSEGILRQAVPHWFSTPLFRLLVSAYEDAARHHGGHGA
HHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCE
LYVRLRRQTRQNTFGGIGRR
EEEEEHHHHHHHHCCCCCCC
>Mature Secondary Structure 
PPRSEKPGKDYLRAEDRILWETVAKTARPLAGKKAEPEALPDFKALMAEEQEKPGAKIA
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCC
PPAGEPGRSRKGFSAPGEMPIQPLDRPTHRKIAKGRVDIEARIDLHGLTQNEAHGLLYGF
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEEEEECCCCCCCCHHHHHH
LVNAHARGLRHVMVITGKGRSLGSEGILRQAVPHWFSTPLFRLLVSAYEDAARHHGGHGA
HHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCE
LYVRLRRQTRQNTFGGIGRR
EEEEEHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA