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The map label for this gene is yafK [H]

Identifier: 225853467

GI number: 225853467

Start: 1976222

End: 1977433

Strand: Direct

Name: yafK [H]

Synonym: BMEA_A2093

Alternate gene names: 225853467

Gene position: 1976222-1977433 (Clockwise)

Preceding gene: 225853466

Following gene: 225853468

Centisome position: 92.97

GC content: 58.58

Gene sequence:

>1212_bases
ATGAAGATCAAAACCGCACTTCTAGGCTCCATTCTGGCAACGGCCCTGCTGGCAGGTTGTCAGGGATCGTCGGTGTCCGA
CCTCGCCATGCGGGCGGAAAAGCCCCTTCCCCAAAAGATTGTTGCCAAGATGCAGGCAAAGGGGATGACCCGCACGTCGC
CGATTCTGGTGCGTATCTTCAAGGAAGAAGGCGTTCTGGAAGTCTGGAAGCAGAAGAATAACGGCAAATACGACCAGATC
GCATCCTACGAAATCTGCAAATGGTCCGGCAAGCTCGGGCCGAAATATATCGAGGGCGATCGTCAGGCGCCGGAAGGTTT
CTACACCGTTCGTCCCGCGCAGATGAACCCGCATTCCAACTATTATCTCGCCTTCAACATCGGCTTTCCCAATGCCTATG
ACCGCGCCAACGGGCGCACGGGCCAGCATCTGATGGTGCATGGGGCATGTTCGTCGTCGGGTTGCTATTCGATGACGGAC
GAACAGGTCGCCGAGATTTATGCCTTCGGGCGCGACGCCTTCAAGGGCGGCCAGCGTGAGTTCCAGATTCAGGCATTTCC
GTTCCGCATGACCGCGGCCAACATGACACGCTACAAGAACGATCCGAATTATTCGTTCTGGAAGATGCTGAAACAGGGCT
ACGACGCATTTGAGACCACCAAGGTTCCGCCGAAAGTCGATGTCTGCGAAAAGCGTTACGTGTTCAACGTTCCGACGCCG
GATGGCCAGCCTTTGTCGCCGACAGGCGCCTGCCCGCCTTCGGTCGGCGGCGAGGCCATGTCCTATGCCTCTTACGAAAA
GACCTTCCAGACGGCTTTCAGCGCCGCACAGAAAGCCCCTGCCCCATCAATACAGGGTCTTGCGGAAGCAAAGCTCGTTT
CCGCATGGAGTGCAGCGCGGGCACGCGGCGAAAAAGTAACGCGCGAGCCGCCGTCACTTTCACCCGCATCGGCTGAAAAG
CCGGGCGCACCGGATATCCGCCCCGCAACACCGGCCATCCAGCCGACCGCCATTGCAACGGCTCCGCAGCAGGCTGCACC
TGCAACACCGGCTCCGCAAATCGCATCCGTGCCGGTACCGCAGCAAAACCCGGCAGAAGCGACTGCCGTGGCCAATCCGC
AGATGTCGTCAATGACGATTGCCAGCACCGTTGCGCAGAATATTGAACAGCCGGGACCAAAGAAGCCGTGGTGGAAAATC
ATCGGCAACTGA

Upstream 100 bases:

>100_bases
ATAAACGATACCGTAAGGTTTTGTTGTTAAACTTTGACCTTCAAGAACGTGGCTTTTGCTCATAAAGTCTCTGGCGTGGC
TCTAACAGACTTGATGCGAC

Downstream 100 bases:

>100_bases
TTTCCGATCAGGAAAACACACCTGTTTACGACCTGAGGGGGCTGAAATGCCCCCTTCCGGTTTTGAAAACCCGCAATCGT
CTGGAAAAAATGGCAAGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 403; Mature: 403

Protein sequence:

>403_residues
MKIKTALLGSILATALLAGCQGSSVSDLAMRAEKPLPQKIVAKMQAKGMTRTSPILVRIFKEEGVLEVWKQKNNGKYDQI
ASYEICKWSGKLGPKYIEGDRQAPEGFYTVRPAQMNPHSNYYLAFNIGFPNAYDRANGRTGQHLMVHGACSSSGCYSMTD
EQVAEIYAFGRDAFKGGQREFQIQAFPFRMTAANMTRYKNDPNYSFWKMLKQGYDAFETTKVPPKVDVCEKRYVFNVPTP
DGQPLSPTGACPPSVGGEAMSYASYEKTFQTAFSAAQKAPAPSIQGLAEAKLVSAWSAARARGEKVTREPPSLSPASAEK
PGAPDIRPATPAIQPTAIATAPQQAAPATPAPQIASVPVPQQNPAEATAVANPQMSSMTIASTVAQNIEQPGPKKPWWKI
IGN

Sequences:

>Translated_403_residues
MKIKTALLGSILATALLAGCQGSSVSDLAMRAEKPLPQKIVAKMQAKGMTRTSPILVRIFKEEGVLEVWKQKNNGKYDQI
ASYEICKWSGKLGPKYIEGDRQAPEGFYTVRPAQMNPHSNYYLAFNIGFPNAYDRANGRTGQHLMVHGACSSSGCYSMTD
EQVAEIYAFGRDAFKGGQREFQIQAFPFRMTAANMTRYKNDPNYSFWKMLKQGYDAFETTKVPPKVDVCEKRYVFNVPTP
DGQPLSPTGACPPSVGGEAMSYASYEKTFQTAFSAAQKAPAPSIQGLAEAKLVSAWSAARARGEKVTREPPSLSPASAEK
PGAPDIRPATPAIQPTAIATAPQQAAPATPAPQIASVPVPQQNPAEATAVANPQMSSMTIASTVAQNIEQPGPKKPWWKI
IGN
>Mature_403_residues
MKIKTALLGSILATALLAGCQGSSVSDLAMRAEKPLPQKIVAKMQAKGMTRTSPILVRIFKEEGVLEVWKQKNNGKYDQI
ASYEICKWSGKLGPKYIEGDRQAPEGFYTVRPAQMNPHSNYYLAFNIGFPNAYDRANGRTGQHLMVHGACSSSGCYSMTD
EQVAEIYAFGRDAFKGGQREFQIQAFPFRMTAANMTRYKNDPNYSFWKMLKQGYDAFETTKVPPKVDVCEKRYVFNVPTP
DGQPLSPTGACPPSVGGEAMSYASYEKTFQTAFSAAQKAPAPSIQGLAEAKLVSAWSAARARGEKVTREPPSLSPASAEK
PGAPDIRPATPAIQPTAIATAPQQAAPATPAPQIASVPVPQQNPAEATAVANPQMSSMTIASTVAQNIEQPGPKKPWWKI
IGN

Specific function: Unknown

COG id: COG3034

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the YkuD family [H]

Homologues:

Organism=Escherichia coli, GI1786418, Length=237, Percent_Identity=45.1476793248945, Blast_Score=199, Evalue=3e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005490 [H]

Pfam domain/function: PF03734 YkuD [H]

EC number: NA

Molecular weight: Translated: 43586; Mature: 43586

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIKTALLGSILATALLAGCQGSSVSDLAMRAEKPLPQKIVAKMQAKGMTRTSPILVRIF
CCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCEEEEEE
KEEGVLEVWKQKNNGKYDQIASYEICKWSGKLGPKYIEGDRQAPEGFYTVRPAQMNPHSN
CCCCHHHHHHCCCCCCCHHHCCEEEEEECCCCCCCEECCCCCCCCCEEEEECCCCCCCCC
YYLAFNIGFPNAYDRANGRTGQHLMVHGACSSSGCYSMTDEQVAEIYAFGRDAFKGGQRE
EEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCHHHHCCCCEE
FQIQAFPFRMTAANMTRYKNDPNYSFWKMLKQGYDAFETTKVPPKVDVCEKRYVFNVPTP
EEEEEECEEEEHHHHHHCCCCCCHHHHHHHHHCCCHHHCCCCCCCCCCCCCCEEEECCCC
DGQPLSPTGACPPSVGGEAMSYASYEKTFQTAFSAAQKAPAPSIQGLAEAKLVSAWSAAR
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
ARGEKVTREPPSLSPASAEKPGAPDIRPATPAIQPTAIATAPQQAAPATPAPQIASVPVP
HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHCCCCCCCCCCCCCCCC
QQNPAEATAVANPQMSSMTIASTVAQNIEQPGPKKPWWKIIGN
CCCCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCHHEECCC
>Mature Secondary Structure
MKIKTALLGSILATALLAGCQGSSVSDLAMRAEKPLPQKIVAKMQAKGMTRTSPILVRIF
CCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCEEEEEE
KEEGVLEVWKQKNNGKYDQIASYEICKWSGKLGPKYIEGDRQAPEGFYTVRPAQMNPHSN
CCCCHHHHHHCCCCCCCHHHCCEEEEEECCCCCCCEECCCCCCCCCEEEEECCCCCCCCC
YYLAFNIGFPNAYDRANGRTGQHLMVHGACSSSGCYSMTDEQVAEIYAFGRDAFKGGQRE
EEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCHHHHCCCCEE
FQIQAFPFRMTAANMTRYKNDPNYSFWKMLKQGYDAFETTKVPPKVDVCEKRYVFNVPTP
EEEEEECEEEEHHHHHHCCCCCCHHHHHHHHHCCCHHHCCCCCCCCCCCCCCEEEECCCC
DGQPLSPTGACPPSVGGEAMSYASYEKTFQTAFSAAQKAPAPSIQGLAEAKLVSAWSAAR
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
ARGEKVTREPPSLSPASAEKPGAPDIRPATPAIQPTAIATAPQQAAPATPAPQIASVPVP
HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHCCCCCCCCCCCCCCCC
QQNPAEATAVANPQMSSMTIASTVAQNIEQPGPKKPWWKIIGN
CCCCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCHHEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]