Click here to switch to the map view.

The map label for this gene is lemA [H]

Identifier: 225853265

GI number: 225853265

Start: 1775367

End: 1775990

Strand: Reverse

Name: lemA [H]

Synonym: BMEA_A1872

Alternate gene names: 225853265

Gene position: 1775990-1775367 (Counterclockwise)

Preceding gene: 225853266

Following gene: 225853264

Centisome position: 83.55

GC content: 55.93

Gene sequence:

>624_bases
ATGACCGCTCAGACGGTTGCCACTTCCTTTTCTTTCCGCCGCATTTTTATCGCTCTCGGTTTGACCGTTCTGGTTCCGCT
GCTTTCAGCCTGCGGTTTCAACACGATCCCGACCAATGAGGAAAAGGCCAAGGCCGCGTGGAGCGAAGTGCAGAACCAGT
ATCAGCGCCGCGCCGATCTGGTACCCAATCTGGTCGAGACCGTGAAGGGCTATGCAGCGCATGAAAAGGAAACCCTGCAA
GCCGTGATCGAGGCGCGCGCCAAGGCCACGCAGGTGCAGATCACGCCGGAAACGCTGAACAATCCTGCGCTTTTCAAGCA
GTTTCAGGACAATCAGGCAAACCTCACCAGTGCACTGTCGCGCTTGATGGTTGTCGTGGAAAAATATCCTGACTTGAAGG
CCAACCAGAATTTCCTCGCTCTGCAATCGCAGCTTGAGGGTACTGAAAACCGCATTGCAGTGGCTCGCCGCGATTATATC
GAGGCGGTACGCACCTATAATACGTCACTGCGAACCATGCCGACGATGATCTGGACATGGATCTGGTATCGCGATGCACA
GCCCATGCCGACCTTCAGCGCCGATGCAGGCAGCCAGGCCGCGCCTAAGGTCAACTTCAACTGA

Upstream 100 bases:

>100_bases
ATCCTGTTGATCTGACGGCTCGCATATTCTTGAACGCGAATCTGCCGGCACCGATATCGATCTTTCCGGGCGCTTCAACG
CCTCTTTTCAGGAGAAGCCC

Downstream 100 bases:

>100_bases
TCGGCGTTTTCGTGGCGGGTATTAGGATCAGGCAGAACCGTTCTTGTGGCTGGAAATGGCCGCAGGGGCTGCTTGCGGCC
ATGGTTGTGCTGTTTGCCGC

Product: LemA family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 206

Protein sequence:

>207_residues
MTAQTVATSFSFRRIFIALGLTVLVPLLSACGFNTIPTNEEKAKAAWSEVQNQYQRRADLVPNLVETVKGYAAHEKETLQ
AVIEARAKATQVQITPETLNNPALFKQFQDNQANLTSALSRLMVVVEKYPDLKANQNFLALQSQLEGTENRIAVARRDYI
EAVRTYNTSLRTMPTMIWTWIWYRDAQPMPTFSADAGSQAAPKVNFN

Sequences:

>Translated_207_residues
MTAQTVATSFSFRRIFIALGLTVLVPLLSACGFNTIPTNEEKAKAAWSEVQNQYQRRADLVPNLVETVKGYAAHEKETLQ
AVIEARAKATQVQITPETLNNPALFKQFQDNQANLTSALSRLMVVVEKYPDLKANQNFLALQSQLEGTENRIAVARRDYI
EAVRTYNTSLRTMPTMIWTWIWYRDAQPMPTFSADAGSQAAPKVNFN
>Mature_206_residues
TAQTVATSFSFRRIFIALGLTVLVPLLSACGFNTIPTNEEKAKAAWSEVQNQYQRRADLVPNLVETVKGYAAHEKETLQA
VIEARAKATQVQITPETLNNPALFKQFQDNQANLTSALSRLMVVVEKYPDLKANQNFLALQSQLEGTENRIAVARRDYIE
AVRTYNTSLRTMPTMIWTWIWYRDAQPMPTFSADAGSQAAPKVNFN

Specific function: Unknown

COG id: COG1704

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LemA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007156 [H]

Pfam domain/function: PF04011 LemA [H]

EC number: NA

Molecular weight: Translated: 23260; Mature: 23129

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAQTVATSFSFRRIFIALGLTVLVPLLSACGFNTIPTNEEKAKAAWSEVQNQYQRRADL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
VPNLVETVKGYAAHEKETLQAVIEARAKATQVQITPETLNNPALFKQFQDNQANLTSALS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECHHHCCCHHHHHHHHCCHHHHHHHHH
RLMVVVEKYPDLKANQNFLALQSQLEGTENRIAVARRDYIEAVRTYNTSLRTMPTMIWTW
HHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
IWYRDAQPMPTFSADAGSQAAPKVNFN
HHHCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TAQTVATSFSFRRIFIALGLTVLVPLLSACGFNTIPTNEEKAKAAWSEVQNQYQRRADL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
VPNLVETVKGYAAHEKETLQAVIEARAKATQVQITPETLNNPALFKQFQDNQANLTSALS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECHHHCCCHHHHHHHHCCHHHHHHHHH
RLMVVVEKYPDLKANQNFLALQSQLEGTENRIAVARRDYIEAVRTYNTSLRTMPTMIWTW
HHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
IWYRDAQPMPTFSADAGSQAAPKVNFN
HHHCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11860552 [H]