| Definition | Brucella melitensis ATCC 23457 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_012441 |
| Length | 2,125,701 |
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The map label for this gene is purH [H]
Identifier: 225853260
GI number: 225853260
Start: 1765546
End: 1767162
Strand: Direct
Name: purH [H]
Synonym: BMEA_A1866
Alternate gene names: 225853260
Gene position: 1765546-1767162 (Clockwise)
Preceding gene: 225853259
Following gene: 225853261
Centisome position: 83.06
GC content: 61.53
Gene sequence:
>1617_bases ATGGCTGTCAGCTCCAAGCATATTCCCGCTCCCGATCTTCATCGGGTGCGCCGCGCCCTCCTTTCCGTTTCCGACAAAAC CGGCCTGATCGATTTCGCCAAGGCGCTTCATGCCAATGGCGTCGAAATCCTCTCGACCGGCGGCACAGCAAAATCGATTG CCGCCGCAGGCATTCCGGTGAAGGACGTATCCGAAATCACCGGCTTTCCGGAAATCATGGATGGGCGCGTCAAGACGCTG CATCCGGCAGTCCATGGCGGCCTGCTCGCCGTGCGCAACGACCCGGAACATGTCGCGGCCATGGAAGAACACGGCATTGG CGGCATCGATCTTGCCGTCATCAATCTTTATCCGTTCGAGGAAGTCCGCTTCAAGGGCGGCGACTACGACACGACCGTCG AGAATATCGACATTGGCGGCCCGGCGATGATCCGCGCTTCGGCCAAGAACCACGCCTATGTCGCAACCGTCGTTGACCCT GCCGATTATGCAGACGTCGTGGCTGAACTGGAAAAGCATTCCGGCTCCCTGCCGCTTGCCTTCCGCAAAAAGCTTGCCGC CAAGGCCTTTTCGCGCACGGCAGCTTATGACGCGGCCATTTCCAACTGGTTTGCCGAAGCGATCGACGAAGAAACGCCGA CCTATCGCGCGGTTGCCGGCAAGCTGCATTCCGTCATGCGCTACGGTGAAAACCCGCACCAGACGGCTGGCTTTTATCTC ACCGGCGAAAAGCGCCCCGGCGTTGCCACTGCGACCCAGCTTCAGGGCAAGCAGCTTTCCTATAACAACATCAACGATAC CGATGCGGCTTTTGAGCTGGTGGCCGAATTCGATCCCGCCCGCACCGCAGCCGTTGCCATCATCAAGCACGCCAATCCAT GCGGCGTGGCGGAAGCGTCCACCATTAAGGAAGCCTACCTCAAGGCACTCGCCTGCGATCCGGTTTCGGCCTTTGGCGGC ATTGTCGCGCTCAACAGGACGCTCGATGAGGAAGCCGCTGAAGAGATCGTGAAAACCTTCACAGAAGTCATCATCGCGCC CGATGCCACCGAAGGCGCACAGGCCATCGTCGCGGCCAAGAAGAACCTGCGCCTGCTTGTCACCGGCGGCCTGCCGGACC CGCGCGCCAAGGGCATTGCCGCCAAGACGGTTGCCGGTGGCCTGCTGGTCCAGTCGCGCGACAATGGTGTGGTGGACGAT CTCGATCTCAAGGTCGTCACCAAGCGCGCACCGACCGAAGCCGAGCTTAACGATCTGAAATTCGCCTTCCGCGTCGGCAA GCATGTGAAGTCGAACGCCATCGTCTATGTGAAGGACGGCGCAACGGTCGGCATTGGCGCAGGCCAGATGAGCCGCGTGG ATTCAGCCCGCATTGCCGCCCGCAAGGCAGAAGATGCGGCCGAAGCCGCCGGCCTTGCAGCGCCGCTCACCAAGGGCTGC GTGGTCGCGTCCGATGCATTCTTCCCCTTTGCAGACGGTCTGCTTTCCGCTGTCGAGGCCGGTGCAACCGCCGTCATCCA GCCGGGCGGCTCCATGCGTGACGACGAAGTGATCGCCGCTGCCGATGAACATGGCATCGCCATGGTCATGACGGGGATGC GCCACTTCCGCCACTGA
Upstream 100 bases:
>100_bases AATCGGTCTTTTGCGGTAGGATTCTCGGCGCGCTTGTGTTAGGGCGAGCCGTCCACTTTCCTGAACGCATCCGTTTCAGC AACGAAGAGACCAACTCCCT
Downstream 100 bases:
>100_bases TCGGAACATATAAAGCAAAGGCCCCGGAACATATGTTTCGGGGCCTTTGTCATATCAGACGGTCCGCCGGATAGGGCGTA ATCAGCGTCAGCGCAAAGCC
Product: bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
Products: NA
Alternate protein names: Phosphoribosylaminoimidazolecarboxamide formyltransferase; AICAR transformylase; IMP cyclohydrolase; ATIC; IMP synthase; Inosinicase [H]
Number of amino acids: Translated: 538; Mature: 537
Protein sequence:
>538_residues MAVSSKHIPAPDLHRVRRALLSVSDKTGLIDFAKALHANGVEILSTGGTAKSIAAAGIPVKDVSEITGFPEIMDGRVKTL HPAVHGGLLAVRNDPEHVAAMEEHGIGGIDLAVINLYPFEEVRFKGGDYDTTVENIDIGGPAMIRASAKNHAYVATVVDP ADYADVVAELEKHSGSLPLAFRKKLAAKAFSRTAAYDAAISNWFAEAIDEETPTYRAVAGKLHSVMRYGENPHQTAGFYL TGEKRPGVATATQLQGKQLSYNNINDTDAAFELVAEFDPARTAAVAIIKHANPCGVAEASTIKEAYLKALACDPVSAFGG IVALNRTLDEEAAEEIVKTFTEVIIAPDATEGAQAIVAAKKNLRLLVTGGLPDPRAKGIAAKTVAGGLLVQSRDNGVVDD LDLKVVTKRAPTEAELNDLKFAFRVGKHVKSNAIVYVKDGATVGIGAGQMSRVDSARIAARKAEDAAEAAGLAAPLTKGC VVASDAFFPFADGLLSAVEAGATAVIQPGGSMRDDEVIAAADEHGIAMVMTGMRHFRH
Sequences:
>Translated_538_residues MAVSSKHIPAPDLHRVRRALLSVSDKTGLIDFAKALHANGVEILSTGGTAKSIAAAGIPVKDVSEITGFPEIMDGRVKTL HPAVHGGLLAVRNDPEHVAAMEEHGIGGIDLAVINLYPFEEVRFKGGDYDTTVENIDIGGPAMIRASAKNHAYVATVVDP ADYADVVAELEKHSGSLPLAFRKKLAAKAFSRTAAYDAAISNWFAEAIDEETPTYRAVAGKLHSVMRYGENPHQTAGFYL TGEKRPGVATATQLQGKQLSYNNINDTDAAFELVAEFDPARTAAVAIIKHANPCGVAEASTIKEAYLKALACDPVSAFGG IVALNRTLDEEAAEEIVKTFTEVIIAPDATEGAQAIVAAKKNLRLLVTGGLPDPRAKGIAAKTVAGGLLVQSRDNGVVDD LDLKVVTKRAPTEAELNDLKFAFRVGKHVKSNAIVYVKDGATVGIGAGQMSRVDSARIAARKAEDAAEAAGLAAPLTKGC VVASDAFFPFADGLLSAVEAGATAVIQPGGSMRDDEVIAAADEHGIAMVMTGMRHFRH >Mature_537_residues AVSSKHIPAPDLHRVRRALLSVSDKTGLIDFAKALHANGVEILSTGGTAKSIAAAGIPVKDVSEITGFPEIMDGRVKTLH PAVHGGLLAVRNDPEHVAAMEEHGIGGIDLAVINLYPFEEVRFKGGDYDTTVENIDIGGPAMIRASAKNHAYVATVVDPA DYADVVAELEKHSGSLPLAFRKKLAAKAFSRTAAYDAAISNWFAEAIDEETPTYRAVAGKLHSVMRYGENPHQTAGFYLT GEKRPGVATATQLQGKQLSYNNINDTDAAFELVAEFDPARTAAVAIIKHANPCGVAEASTIKEAYLKALACDPVSAFGGI VALNRTLDEEAAEEIVKTFTEVIIAPDATEGAQAIVAAKKNLRLLVTGGLPDPRAKGIAAKTVAGGLLVQSRDNGVVDDL DLKVVTKRAPTEAELNDLKFAFRVGKHVKSNAIVYVKDGATVGIGAGQMSRVDSARIAARKAEDAAEAAGLAAPLTKGCV VASDAFFPFADGLLSAVEAGATAVIQPGGSMRDDEVIAAADEHGIAMVMTGMRHFRH
Specific function: De novo purine biosynthesis; ninth step. De novo purine biosynthesis; tenth step. [C]
COG id: COG0138
COG function: function code F; AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purH family [H]
Homologues:
Organism=Homo sapiens, GI20127454, Length=471, Percent_Identity=40.7643312101911, Blast_Score=272, Evalue=5e-73, Organism=Escherichia coli, GI1790439, Length=537, Percent_Identity=56.2383612662942, Blast_Score=544, Evalue=1e-156, Organism=Caenorhabditis elegans, GI71985564, Length=475, Percent_Identity=35.3684210526316, Blast_Score=244, Evalue=7e-65, Organism=Caenorhabditis elegans, GI71985574, Length=305, Percent_Identity=28.1967213114754, Blast_Score=95, Evalue=7e-20, Organism=Caenorhabditis elegans, GI71985556, Length=60, Percent_Identity=50, Blast_Score=70, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6323056, Length=607, Percent_Identity=34.7611202635914, Blast_Score=284, Evalue=3e-77, Organism=Saccharomyces cerevisiae, GI6323768, Length=479, Percent_Identity=36.5344467640919, Blast_Score=257, Evalue=3e-69, Organism=Drosophila melanogaster, GI24649832, Length=475, Percent_Identity=38.9473684210526, Blast_Score=261, Evalue=1e-69,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 640 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002695 - InterPro: IPR013982 - InterPro: IPR016193 - InterPro: IPR011607 [H]
Pfam domain/function: PF01808 AICARFT_IMPCHas; PF02142 MGS [H]
EC number: =2.1.2.3; =3.5.4.10 [H]
Molecular weight: Translated: 56482; Mature: 56351
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVSSKHIPAPDLHRVRRALLSVSDKTGLIDFAKALHANGVEILSTGGTAKSIAAAGIPV CCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEEECCCCHHHHHHCCCCH KDVSEITGFPEIMDGRVKTLHPAVHGGLLAVRNDPEHVAAMEEHGIGGIDLAVINLYPFE HHHHHHCCCHHHHCCCHHEECHHHHCCEEEECCCHHHHHHHHHCCCCCEEEEEEEECCHH EVRFKGGDYDTTVENIDIGGPAMIRASAKNHAYVATVVDPADYADVVAELEKHSGSLPLA HHEECCCCCCCCCCEECCCCCEEEEECCCCCEEEEEEECCHHHHHHHHHHHHCCCCCCHH FRKKLAAKAFSRTAAYDAAISNWFAEAIDEETPTYRAVAGKLHSVMRYGENPHQTAGFYL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEE TGEKRPGVATATQLQGKQLSYNNINDTDAAFELVAEFDPARTAAVAIIKHANPCGVAEAS ECCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHEEEEEECCCCCCCCHHH TIKEAYLKALACDPVSAFGGIVALNRTLDEEAAEEIVKTFTEVIIAPDATEGAQAIVAAK HHHHHHHHHHCCCCHHHHCCEEEECCHHHHHHHHHHHHHHHHEEECCCCCCCHHHHEEEC KNLRLLVTGGLPDPRAKGIAAKTVAGGLLVQSRDNGVVDDLDLKVVTKRAPTEAELNDLK CCCEEEEECCCCCCHHCCCCHHHHHCCEEEEECCCCCCCCCCEEEEECCCCCCCHHHHHH FAFRVGKHVKSNAIVYVKDGATVGIGAGQMSRVDSARIAARKAEDAAEAAGLAAPLTKGC HHHHHCCCCCCCEEEEEECCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCE VVASDAFFPFADGLLSAVEAGATAVIQPGGSMRDDEVIAAADEHGIAMVMTGMRHFRH EEECCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCEEEECCCCCCHHHHHHHHHHCC >Mature Secondary Structure AVSSKHIPAPDLHRVRRALLSVSDKTGLIDFAKALHANGVEILSTGGTAKSIAAAGIPV CCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEEECCCCHHHHHHCCCCH KDVSEITGFPEIMDGRVKTLHPAVHGGLLAVRNDPEHVAAMEEHGIGGIDLAVINLYPFE HHHHHHCCCHHHHCCCHHEECHHHHCCEEEECCCHHHHHHHHHCCCCCEEEEEEEECCHH EVRFKGGDYDTTVENIDIGGPAMIRASAKNHAYVATVVDPADYADVVAELEKHSGSLPLA HHEECCCCCCCCCCEECCCCCEEEEECCCCCEEEEEEECCHHHHHHHHHHHHCCCCCCHH FRKKLAAKAFSRTAAYDAAISNWFAEAIDEETPTYRAVAGKLHSVMRYGENPHQTAGFYL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEE TGEKRPGVATATQLQGKQLSYNNINDTDAAFELVAEFDPARTAAVAIIKHANPCGVAEAS ECCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHEEEEEECCCCCCCCHHH TIKEAYLKALACDPVSAFGGIVALNRTLDEEAAEEIVKTFTEVIIAPDATEGAQAIVAAK HHHHHHHHHHCCCCHHHHCCEEEECCHHHHHHHHHHHHHHHHEEECCCCCCCHHHHEEEC KNLRLLVTGGLPDPRAKGIAAKTVAGGLLVQSRDNGVVDDLDLKVVTKRAPTEAELNDLK CCCEEEEECCCCCCHHCCCCHHHHHCCEEEEECCCCCCCCCCEEEEECCCCCCCHHHHHH FAFRVGKHVKSNAIVYVKDGATVGIGAGQMSRVDSARIAARKAEDAAEAAGLAAPLTKGC HHHHHCCCCCCCEEEEEECCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCE VVASDAFFPFADGLLSAVEAGATAVIQPGGSMRDDEVIAAADEHGIAMVMTGMRHFRH EEECCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCEEEECCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA