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The map label for this gene is ycaD [H]

Identifier: 225853192

GI number: 225853192

Start: 1695951

End: 1697189

Strand: Direct

Name: ycaD [H]

Synonym: BMEA_A1792

Alternate gene names: 225853192

Gene position: 1695951-1697189 (Clockwise)

Preceding gene: 225853191

Following gene: 225853195

Centisome position: 79.78

GC content: 59.89

Gene sequence:

>1239_bases
TTGCGTATTTATATTCAGGTTCTGGCTCTTCTCTGTGGCACAGCCTTTCTGCTGATCGCTTCCGGCCTGCATGGGCTCCT
GTTGCCGCTGCGTGGAGGCGCGGAAGGCTTTTCGGTCACATCGCTTGGTATGCTCGGCACCACCTGGGCAGGTGGCTTCG
AGGCGGGCTGCCTGTTTGCACCGCGTCTCGTGCGCCGCGTCGGGCATGTGCGCGCCTTCGGCTGTTTTGCAGCCTCCGCT
GCCATCATTGCCCTTCTCTCCGGCATTTTCGTCGATGCCACCATCTGGGTGCTCCTGCGTGCCTTCACCGGCTTTTCAAT
GGCCGGCGCCTTCATGGTCATTGAAAGCTGGCTGAACGAGCGCGCCTCGAACGAAACGCGCGGCAAGATTTTCGGCATGT
ATATGATGGTCAACTACGGAGCCACCATGACCGGCCAGATGCTGGTGGCGGCAGGCGATGTGCGCTCCGATCACCTGTTC
ATGATCTGCGGCGTCTTCTTCTGCCTGGCGCTTATTCCAACCGCAATCTCCACCGCCGTCAGCCCCAAACCGCTCACCGA
AGTCCAGCTCGATCTGAAGGTGCTTTATCGCAATTCACCCGCCGCTTTTGTCGGCTGTATTCTTATCGGCATCGCCAATG
GCGCATGGGGCACACTCGGCGCGGTTTTCGGCGCCAAGTCGGGTATCTCAACCACGGAAATCGCGCTCATGGTCAGCGTG
ACCATTGCAGCGGGCGCATTGATGCAAATCCCGGTCGGGCGTATTTCCGATCTTGTGGACCGGCGCTTCGTGCTGGCAAG
TGTGGCATCGCTCGCCGCGCTTGTCGGCCTTACCATCTTTAGCCTCGCGCCGGAAAGCGGAACTGTCATCATCGCCATGA
CCGGGTGCTATGGCGCGCTTGCCTATGCGCTCTATCCGGTTGCCGTCGCCCATGCAAACGATCATGCAACGGCGGAAAGC
TTCGTGAAGGTTTCCAGCGGGCTTCTGCTGCTTTATGGTTTCGGAACCATGCTGGGGCCGCTTCTGGCCGCTGCCGCCAT
GGATATTTTCTGGCCATCGGGCCTCTTCGCGGTCACGGCGCTGGCACATATCTCGATCACAGCCTATGCCCTGTTCCGCT
CCCGCAGGCGCGCCTCGGTTCCAAAAGAAGAAAAAGACCAGTTCAAGAGTATGCCGTCAGAACGCGGCGCAACACCAGAG
GCGATGAACCTCGACCCAAGAGCCGAGCCGGAAGGCTAA

Upstream 100 bases:

>100_bases
TAAGCCCCTCGGCGGGGCAACCCGCCCCGCCTTGGGCACCCCGGAGCGGCTTGCACAAATTTGACCGTCATCGCGGCCTT
CAGATTTCAGGAATGAAATT

Downstream 100 bases:

>100_bases
AGCAATTTCAAGCCAAAAGATAAGATGCGCATCAAAGCAACAATTAGAGCGCGGATCTGGTTCATTCAGATCGAAACGCG
CTCTAAAAGTGCTGCAAATC

Product: major facilitator superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 412; Mature: 412

Protein sequence:

>412_residues
MRIYIQVLALLCGTAFLLIASGLHGLLLPLRGGAEGFSVTSLGMLGTTWAGGFEAGCLFAPRLVRRVGHVRAFGCFAASA
AIIALLSGIFVDATIWVLLRAFTGFSMAGAFMVIESWLNERASNETRGKIFGMYMMVNYGATMTGQMLVAAGDVRSDHLF
MICGVFFCLALIPTAISTAVSPKPLTEVQLDLKVLYRNSPAAFVGCILIGIANGAWGTLGAVFGAKSGISTTEIALMVSV
TIAAGALMQIPVGRISDLVDRRFVLASVASLAALVGLTIFSLAPESGTVIIAMTGCYGALAYALYPVAVAHANDHATAES
FVKVSSGLLLLYGFGTMLGPLLAAAAMDIFWPSGLFAVTALAHISITAYALFRSRRRASVPKEEKDQFKSMPSERGATPE
AMNLDPRAEPEG

Sequences:

>Translated_412_residues
MRIYIQVLALLCGTAFLLIASGLHGLLLPLRGGAEGFSVTSLGMLGTTWAGGFEAGCLFAPRLVRRVGHVRAFGCFAASA
AIIALLSGIFVDATIWVLLRAFTGFSMAGAFMVIESWLNERASNETRGKIFGMYMMVNYGATMTGQMLVAAGDVRSDHLF
MICGVFFCLALIPTAISTAVSPKPLTEVQLDLKVLYRNSPAAFVGCILIGIANGAWGTLGAVFGAKSGISTTEIALMVSV
TIAAGALMQIPVGRISDLVDRRFVLASVASLAALVGLTIFSLAPESGTVIIAMTGCYGALAYALYPVAVAHANDHATAES
FVKVSSGLLLLYGFGTMLGPLLAAAAMDIFWPSGLFAVTALAHISITAYALFRSRRRASVPKEEKDQFKSMPSERGATPE
AMNLDPRAEPEG
>Mature_412_residues
MRIYIQVLALLCGTAFLLIASGLHGLLLPLRGGAEGFSVTSLGMLGTTWAGGFEAGCLFAPRLVRRVGHVRAFGCFAASA
AIIALLSGIFVDATIWVLLRAFTGFSMAGAFMVIESWLNERASNETRGKIFGMYMMVNYGATMTGQMLVAAGDVRSDHLF
MICGVFFCLALIPTAISTAVSPKPLTEVQLDLKVLYRNSPAAFVGCILIGIANGAWGTLGAVFGAKSGISTTEIALMVSV
TIAAGALMQIPVGRISDLVDRRFVLASVASLAALVGLTIFSLAPESGTVIIAMTGCYGALAYALYPVAVAHANDHATAES
FVKVSSGLLLLYGFGTMLGPLLAAAAMDIFWPSGLFAVTALAHISITAYALFRSRRRASVPKEEKDQFKSMPSERGATPE
AMNLDPRAEPEG

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. YcaD (TC 2.A.1.26) family [H]

Homologues:

Organism=Escherichia coli, GI1787126, Length=366, Percent_Identity=28.1420765027322, Blast_Score=101, Evalue=1e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 43313; Mature: 43313

Theoretical pI: Translated: 8.28; Mature: 8.28

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIYIQVLALLCGTAFLLIASGLHGLLLPLRGGAEGFSVTSLGMLGTTWAGGFEAGCLFA
CCHHHHHHHHHHHHHHHHHHHCHHHEEEECCCCCCCCCEEHHHHHHCCCCCCCCCCHHHH
PRLVRRVGHVRAFGCFAASAAIIALLSGIFVDATIWVLLRAFTGFSMAGAFMVIESWLNE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
RASNETRGKIFGMYMMVNYGATMTGQMLVAAGDVRSDHLFMICGVFFCLALIPTAISTAV
HCCCCCCHHHEEEEEEEECCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCC
SPKPLTEVQLDLKVLYRNSPAAFVGCILIGIANGAWGTLGAVFGAKSGISTTEIALMVSV
CCCCCHHHEEEEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHH
TIAAGALMQIPVGRISDLVDRRFVLASVASLAALVGLTIFSLAPESGTVIIAMTGCYGAL
HHHHCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHH
AYALYPVAVAHANDHATAESFVKVSSGLLLLYGFGTMLGPLLAAAAMDIFWPSGLFAVTA
HHHHHHHHHCCCCCCHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
LAHISITAYALFRSRRRASVPKEEKDQFKSMPSERGATPEAMNLDPRAEPEG
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRIYIQVLALLCGTAFLLIASGLHGLLLPLRGGAEGFSVTSLGMLGTTWAGGFEAGCLFA
CCHHHHHHHHHHHHHHHHHHHCHHHEEEECCCCCCCCCEEHHHHHHCCCCCCCCCCHHHH
PRLVRRVGHVRAFGCFAASAAIIALLSGIFVDATIWVLLRAFTGFSMAGAFMVIESWLNE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
RASNETRGKIFGMYMMVNYGATMTGQMLVAAGDVRSDHLFMICGVFFCLALIPTAISTAV
HCCCCCCHHHEEEEEEEECCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCC
SPKPLTEVQLDLKVLYRNSPAAFVGCILIGIANGAWGTLGAVFGAKSGISTTEIALMVSV
CCCCCHHHEEEEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHH
TIAAGALMQIPVGRISDLVDRRFVLASVASLAALVGLTIFSLAPESGTVIIAMTGCYGAL
HHHHCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHH
AYALYPVAVAHANDHATAESFVKVSSGLLLLYGFGTMLGPLLAAAAMDIFWPSGLFAVTA
HHHHHHHHHCCCCCCHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
LAHISITAYALFRSRRRASVPKEEKDQFKSMPSERGATPEAMNLDPRAEPEG
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA