Click here to switch to the map view.

The map label for this gene is rbsA [C]

Identifier: 225853100

GI number: 225853100

Start: 1599806

End: 1601227

Strand: Reverse

Name: rbsA [C]

Synonym: BMEA_A1684

Alternate gene names: 225853100

Gene position: 1601227-1599806 (Counterclockwise)

Preceding gene: 225853102

Following gene: 225853099

Centisome position: 75.33

GC content: 55.7

Gene sequence:

>1422_bases
TTGCGGGATGGGCGGCTGCAATTGCGTACCGGCTCGGTACATGCGCTGTGCGGCGGCAATGGCGCGGGCAAATCCACGTT
TTTGAAAATCCTGATGGGCATTCATGCCCGCGATGGTGGACATATCCGCCGGCGTGGAAAAGAGGTTACGTATTCCAGCC
CCGCCGAAGCGTTGCAGGCGGGTATTGCGATCATCGAACAGGAGCTAAGCCCCGTTCCCCATATGACCGTGGCGGAGAAT
ATCTATTTGGGCAGGGAGCCGCTTCGCCGTTTCGGTGGCATCGATTTCAAGACGATGAACCTCAATGCCCAGAAGCTTTT
GGACCAGCTTGAGTTCAAGATTCGCGCCAACCAGTTCATGATGAACCTGTCTGTCGCGCAGGTGCAGCTTGTGGAAATAG
CCAAGGCGCTCAGTCACGACGCTGAAGTCATTTTCATGGACGAACCGACATCGGCCATTGGTGAAAAAGAAGCACAGCAG
CTTTTTGCAGCGATAGAGCGTTTGAAAGCGAGCGGAAAAGGCATTGTCTATGTCTCCCATCGCCTGTCGGAAATTTTTCA
GATTGCCGATAGCTATACCGTGTTTCGCGACGGCAGTTATATCGATAGCGGCGATCTCGGTGGCATCACCCGTGCGGAAC
TGATCCATATGATCGTCGGGCGGGAACTGGGTGAGGAATATATCAAGACGAATGCGCCTACGGAAATACCGGGCGTCGAG
GTTTCCGGCCTCAGCGCGCCCGGCAAGATAACCGACATTTCCTTTACCGCGCATAAGGGCGAGATTTTTGGCATTTACGG
GTTGATGGGGTCAGGCCGCTCGGAAATATTCAACTGTCTTTTCGGATTGGAGAAAGCCTCCCAAGGAACAATTCGGCTTG
AAGGCGAACCCGTCACCGTCCGGCGCCCCGCGGACGCCATGGCTCTGGGGCTGGCTTTTGTGACGGAAGATCGCAAGCTG
ACCGGCCTCAATCTCGGCGACAGCGTTCGCAACAATATATGCCTTGCCAGCCTTCCCGAGATGAGTCCGCATTTTTCAAT
GAATCGGCGTGCGGAATCGGCCGCCAGCAGGGAGATGATCGAGCGTTTCAGGATCAAGGTTGCGCACGACACGATGGCCG
TTTCGGGCCTTTCCGGCGGCAACCAGCAGAAGGTCGTGCTCGGAAAATGGTTCCTGCGAAAGCCACGCGTTCTGCTGCTC
GATGAACCCACTCGCGGTGTCGATGTGGGTGCAAAACAGGAAATTTATCGCATCATTTGCGAATTTGCCGCCCAAGGCGG
GACCGTCGTCATGGTTTCTTCCGAGATTGATGAAGTCCTCGGCATGTCTGACCGCATCATGGTCATGCGTGGCGGACAAT
CGGTCGGCATCTACCGCAGGGCGGAAACGGACGCGCAGTCATTGGTGCATCTTTCGACATGA

Upstream 100 bases:

>100_bases
TGAAATCGGCGGCAGCGCGAACTGCCGCCAGTGGAGGAGATACATTGGAATTTCTGCTCGATGTGGAGGGCTCAGGAAGT
CCTTTGGTGGTGTTGCTGCC

Downstream 100 bases:

>100_bases
AGGCTGCCGGGGAGAATATCGCGTTCCGTTCGTGACCATGAAGATAGAGCAGTTGCCTATGCAGCAGACGCCGCAGGTTC
TGGAGAGGTAGAACAGTGTC

Product: ribose/galactose/methyl galactoside import ATP-binding protein 2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 473; Mature: 473

Protein sequence:

>473_residues
MRDGRLQLRTGSVHALCGGNGAGKSTFLKILMGIHARDGGHIRRRGKEVTYSSPAEALQAGIAIIEQELSPVPHMTVAEN
IYLGREPLRRFGGIDFKTMNLNAQKLLDQLEFKIRANQFMMNLSVAQVQLVEIAKALSHDAEVIFMDEPTSAIGEKEAQQ
LFAAIERLKASGKGIVYVSHRLSEIFQIADSYTVFRDGSYIDSGDLGGITRAELIHMIVGRELGEEYIKTNAPTEIPGVE
VSGLSAPGKITDISFTAHKGEIFGIYGLMGSGRSEIFNCLFGLEKASQGTIRLEGEPVTVRRPADAMALGLAFVTEDRKL
TGLNLGDSVRNNICLASLPEMSPHFSMNRRAESAASREMIERFRIKVAHDTMAVSGLSGGNQQKVVLGKWFLRKPRVLLL
DEPTRGVDVGAKQEIYRIICEFAAQGGTVVMVSSEIDEVLGMSDRIMVMRGGQSVGIYRRAETDAQSLVHLST

Sequences:

>Translated_473_residues
MRDGRLQLRTGSVHALCGGNGAGKSTFLKILMGIHARDGGHIRRRGKEVTYSSPAEALQAGIAIIEQELSPVPHMTVAEN
IYLGREPLRRFGGIDFKTMNLNAQKLLDQLEFKIRANQFMMNLSVAQVQLVEIAKALSHDAEVIFMDEPTSAIGEKEAQQ
LFAAIERLKASGKGIVYVSHRLSEIFQIADSYTVFRDGSYIDSGDLGGITRAELIHMIVGRELGEEYIKTNAPTEIPGVE
VSGLSAPGKITDISFTAHKGEIFGIYGLMGSGRSEIFNCLFGLEKASQGTIRLEGEPVTVRRPADAMALGLAFVTEDRKL
TGLNLGDSVRNNICLASLPEMSPHFSMNRRAESAASREMIERFRIKVAHDTMAVSGLSGGNQQKVVLGKWFLRKPRVLLL
DEPTRGVDVGAKQEIYRIICEFAAQGGTVVMVSSEIDEVLGMSDRIMVMRGGQSVGIYRRAETDAQSLVHLST
>Mature_473_residues
MRDGRLQLRTGSVHALCGGNGAGKSTFLKILMGIHARDGGHIRRRGKEVTYSSPAEALQAGIAIIEQELSPVPHMTVAEN
IYLGREPLRRFGGIDFKTMNLNAQKLLDQLEFKIRANQFMMNLSVAQVQLVEIAKALSHDAEVIFMDEPTSAIGEKEAQQ
LFAAIERLKASGKGIVYVSHRLSEIFQIADSYTVFRDGSYIDSGDLGGITRAELIHMIVGRELGEEYIKTNAPTEIPGVE
VSGLSAPGKITDISFTAHKGEIFGIYGLMGSGRSEIFNCLFGLEKASQGTIRLEGEPVTVRRPADAMALGLAFVTEDRKL
TGLNLGDSVRNNICLASLPEMSPHFSMNRRAESAASREMIERFRIKVAHDTMAVSGLSGGNQQKVVLGKWFLRKPRVLLL
DEPTRGVDVGAKQEIYRIICEFAAQGGTVVMVSSEIDEVLGMSDRIMVMRGGQSVGIYRRAETDAQSLVHLST

Specific function: Part of an ABC transporter complex involved in carbohydrate import. Could be involved in ribose, galactose and/or methyl galactoside import. Responsible for energy coupling to the transport system [H]

COG id: COG1129

COG function: function code G; ABC-type sugar transport system, ATPase component

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI31657092, Length=205, Percent_Identity=26.8292682926829, Blast_Score=76, Evalue=5e-14,
Organism=Homo sapiens, GI9961252, Length=215, Percent_Identity=27.4418604651163, Blast_Score=69, Evalue=9e-12,
Organism=Homo sapiens, GI4505771, Length=215, Percent_Identity=27.4418604651163, Blast_Score=69, Evalue=1e-11,
Organism=Homo sapiens, GI9961250, Length=215, Percent_Identity=27.4418604651163, Blast_Score=69, Evalue=1e-11,
Organism=Homo sapiens, GI9955963, Length=222, Percent_Identity=26.1261261261261, Blast_Score=67, Evalue=4e-11,
Organism=Homo sapiens, GI42741659, Length=246, Percent_Identity=26.0162601626016, Blast_Score=67, Evalue=4e-11,
Organism=Escherichia coli, GI1790190, Length=466, Percent_Identity=46.137339055794, Blast_Score=415, Evalue=1e-117,
Organism=Escherichia coli, GI1788472, Length=473, Percent_Identity=41.4376321353066, Blast_Score=366, Evalue=1e-102,
Organism=Escherichia coli, GI1788210, Length=474, Percent_Identity=40.5063291139241, Blast_Score=340, Evalue=1e-94,
Organism=Escherichia coli, GI1789991, Length=461, Percent_Identity=40.7809110629067, Blast_Score=329, Evalue=2e-91,
Organism=Escherichia coli, GI1790525, Length=469, Percent_Identity=38.592750533049, Blast_Score=322, Evalue=3e-89,
Organism=Escherichia coli, GI48995001, Length=466, Percent_Identity=35.6223175965665, Blast_Score=311, Evalue=9e-86,
Organism=Escherichia coli, GI1788897, Length=455, Percent_Identity=39.7802197802198, Blast_Score=303, Evalue=1e-83,
Organism=Escherichia coli, GI1787792, Length=464, Percent_Identity=35.1293103448276, Blast_Score=262, Evalue=3e-71,
Organism=Escherichia coli, GI145693107, Length=529, Percent_Identity=24.952741020794, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI48994943, Length=456, Percent_Identity=23.2456140350877, Blast_Score=91, Evalue=2e-19,
Organism=Escherichia coli, GI1788506, Length=499, Percent_Identity=24.6492985971944, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1788761, Length=206, Percent_Identity=29.126213592233, Blast_Score=83, Evalue=4e-17,
Organism=Escherichia coli, GI1786345, Length=225, Percent_Identity=29.7777777777778, Blast_Score=81, Evalue=1e-16,
Organism=Escherichia coli, GI1787089, Length=216, Percent_Identity=26.8518518518519, Blast_Score=80, Evalue=3e-16,
Organism=Escherichia coli, GI87081791, Length=213, Percent_Identity=27.6995305164319, Blast_Score=80, Evalue=3e-16,
Organism=Escherichia coli, GI1787370, Length=222, Percent_Identity=28.3783783783784, Blast_Score=79, Evalue=8e-16,
Organism=Escherichia coli, GI1787712, Length=254, Percent_Identity=25.5905511811024, Blast_Score=78, Evalue=2e-15,
Organism=Escherichia coli, GI1788450, Length=231, Percent_Identity=32.4675324675325, Blast_Score=77, Evalue=3e-15,
Organism=Escherichia coli, GI1787105, Length=200, Percent_Identity=29, Blast_Score=76, Evalue=4e-15,
Organism=Escherichia coli, GI87081709, Length=210, Percent_Identity=28.0952380952381, Blast_Score=76, Evalue=5e-15,
Organism=Escherichia coli, GI1786398, Length=212, Percent_Identity=25.4716981132075, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI87082268, Length=211, Percent_Identity=27.4881516587678, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1789032, Length=208, Percent_Identity=26.9230769230769, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1786698, Length=202, Percent_Identity=26.2376237623762, Blast_Score=73, Evalue=3e-14,
Organism=Escherichia coli, GI1786872, Length=190, Percent_Identity=27.8947368421053, Blast_Score=73, Evalue=3e-14,
Organism=Escherichia coli, GI1790467, Length=204, Percent_Identity=26.9607843137255, Blast_Score=72, Evalue=7e-14,
Organism=Escherichia coli, GI48994997, Length=220, Percent_Identity=26.3636363636364, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1789891, Length=210, Percent_Identity=27.1428571428571, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1789864, Length=221, Percent_Identity=23.9819004524887, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1789873, Length=207, Percent_Identity=25.6038647342995, Blast_Score=69, Evalue=7e-13,
Organism=Escherichia coli, GI1787029, Length=203, Percent_Identity=28.0788177339901, Blast_Score=69, Evalue=8e-13,
Organism=Escherichia coli, GI48994883, Length=220, Percent_Identity=25, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI1787500, Length=209, Percent_Identity=27.7511961722488, Blast_Score=68, Evalue=2e-12,
Organism=Escherichia coli, GI1789593, Length=212, Percent_Identity=27.3584905660377, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1786319, Length=204, Percent_Identity=24.0196078431373, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI1788225, Length=206, Percent_Identity=26.6990291262136, Blast_Score=66, Evalue=4e-12,
Organism=Escherichia coli, GI1790739, Length=208, Percent_Identity=24.5192307692308, Blast_Score=66, Evalue=5e-12,
Organism=Escherichia coli, GI1786654, Length=198, Percent_Identity=30.3030303030303, Blast_Score=66, Evalue=5e-12,
Organism=Escherichia coli, GI1787143, Length=214, Percent_Identity=28.9719626168224, Blast_Score=65, Evalue=8e-12,
Organism=Escherichia coli, GI1789672, Length=205, Percent_Identity=23.4146341463415, Blast_Score=65, Evalue=8e-12,
Organism=Escherichia coli, GI87081782, Length=200, Percent_Identity=28.5, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1786253, Length=186, Percent_Identity=26.8817204301075, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI87081834, Length=211, Percent_Identity=27.0142180094787, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1786563, Length=204, Percent_Identity=24.5098039215686, Blast_Score=62, Evalue=6e-11,
Organism=Escherichia coli, GI1787759, Length=237, Percent_Identity=26.1603375527426, Blast_Score=62, Evalue=7e-11,
Organism=Escherichia coli, GI1786803, Length=216, Percent_Identity=25.462962962963, Blast_Score=62, Evalue=7e-11,
Organism=Escherichia coli, GI1788644, Length=215, Percent_Identity=28.3720930232558, Blast_Score=62, Evalue=1e-10,
Organism=Caenorhabditis elegans, GI115533608, Length=207, Percent_Identity=25.6038647342995, Blast_Score=75, Evalue=8e-14,
Organism=Caenorhabditis elegans, GI17541710, Length=197, Percent_Identity=28.9340101522843, Blast_Score=70, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI193202349, Length=202, Percent_Identity=29.7029702970297, Blast_Score=68, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI17567265, Length=203, Percent_Identity=28.5714285714286, Blast_Score=68, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI71983523, Length=209, Percent_Identity=26.3157894736842, Blast_Score=66, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI71983510, Length=209, Percent_Identity=26.3157894736842, Blast_Score=66, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI71983516, Length=209, Percent_Identity=26.3157894736842, Blast_Score=66, Evalue=4e-11,
Organism=Saccharomyces cerevisiae, GI6319856, Length=205, Percent_Identity=27.3170731707317, Blast_Score=63, Evalue=8e-11,
Organism=Drosophila melanogaster, GI24666092, Length=260, Percent_Identity=25.7692307692308, Blast_Score=72, Evalue=9e-13,
Organism=Drosophila melanogaster, GI17136592, Length=223, Percent_Identity=23.7668161434978, Blast_Score=69, Evalue=6e-12,
Organism=Drosophila melanogaster, GI85726357, Length=238, Percent_Identity=28.9915966386555, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI23397593, Length=233, Percent_Identity=27.0386266094421, Blast_Score=67, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24643674, Length=208, Percent_Identity=22.1153846153846, Blast_Score=66, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR015862
- InterPro:   IPR015861
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: =3.6.3.17 [H]

Molecular weight: Translated: 51682; Mature: 51682

Theoretical pI: Translated: 7.36; Mature: 7.36

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDGRLQLRTGSVHALCGGNGAGKSTFLKILMGIHARDGGHIRRRGKEVTYSSPAEALQA
CCCCEEEEEECCEEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCHHHHHHH
GIAIIEQELSPVPHMTVAENIYLGREPLRRFGGIDFKTMNLNAQKLLDQLEFKIRANQFM
HHHHHHHHCCCCCCCHHHHHEECCHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHE
MNLSVAQVQLVEIAKALSHDAEVIFMDEPTSAIGEKEAQQLFAAIERLKASGKGIVYVSH
EEHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHCHHHHHHHHHHHHHHHCCCCEEEEEHH
RLSEIFQIADSYTVFRDGSYIDSGDLGGITRAELIHMIVGRELGEEYIKTNAPTEIPGVE
HHHHHHHHHHCEEEEECCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEE
VSGLSAPGKITDISFTAHKGEIFGIYGLMGSGRSEIFNCLFGLEKASQGTIRLEGEPVTV
EECCCCCCCEEEEEEEECCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCEEEECCCEEEE
RRPADAMALGLAFVTEDRKLTGLNLGDSVRNNICLASLPEMSPHFSMNRRAESAASREMI
ECCCHHHHHEEEEEECCCEEECCCCCHHHHCCEEEEECCCCCCCCCCCHHHHHHHHHHHH
ERFRIKVAHDTMAVSGLSGGNQQKVVLGKWFLRKPRVLLLDEPTRGVDVGAKQEIYRIIC
HHHHEEEEECEEEEECCCCCCCCEEEEEHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHH
EFAAQGGTVVMVSSEIDEVLGMSDRIMVMRGGQSVGIYRRAETDAQSLVHLST
HHHCCCCEEEEEECHHHHHHCCCCEEEEEECCCCEEEEEECCCCHHHHEEECC
>Mature Secondary Structure
MRDGRLQLRTGSVHALCGGNGAGKSTFLKILMGIHARDGGHIRRRGKEVTYSSPAEALQA
CCCCEEEEEECCEEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCHHHHHHH
GIAIIEQELSPVPHMTVAENIYLGREPLRRFGGIDFKTMNLNAQKLLDQLEFKIRANQFM
HHHHHHHHCCCCCCCHHHHHEECCHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHE
MNLSVAQVQLVEIAKALSHDAEVIFMDEPTSAIGEKEAQQLFAAIERLKASGKGIVYVSH
EEHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHCHHHHHHHHHHHHHHHCCCCEEEEEHH
RLSEIFQIADSYTVFRDGSYIDSGDLGGITRAELIHMIVGRELGEEYIKTNAPTEIPGVE
HHHHHHHHHHCEEEEECCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEE
VSGLSAPGKITDISFTAHKGEIFGIYGLMGSGRSEIFNCLFGLEKASQGTIRLEGEPVTV
EECCCCCCCEEEEEEEECCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCEEEECCCEEEE
RRPADAMALGLAFVTEDRKLTGLNLGDSVRNNICLASLPEMSPHFSMNRRAESAASREMI
ECCCHHHHHEEEEEECCCEEECCCCCHHHHCCEEEEECCCCCCCCCCCHHHHHHHHHHHH
ERFRIKVAHDTMAVSGLSGGNQQKVVLGKWFLRKPRVLLLDEPTRGVDVGAKQEIYRIIC
HHHHEEEEECEEEEECCCCCCCCEEEEEHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHH
EFAAQGGTVVMVSSEIDEVLGMSDRIMVMRGGQSVGIYRRAETDAQSLVHLST
HHHCCCCEEEEEECHHHHHHCCCCEEEEEECCCCEEEEEECCCCHHHHEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA