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The map label for this gene is nolR [H]

Identifier: 225853063

GI number: 225853063

Start: 1557230

End: 1557577

Strand: Direct

Name: nolR [H]

Synonym: BMEA_A1642

Alternate gene names: 225853063

Gene position: 1557230-1557577 (Clockwise)

Preceding gene: 225853061

Following gene: 225853064

Centisome position: 73.26

GC content: 48.28

Gene sequence:

>348_bases
ATGACTAACAAAGTTACTTTTTATGATTTAGTAGAAAACGCAGATCAGGCTGCAGATTTTCTCTCAGCGCTTGCTAACAA
TAAAAGGCTTCTGATTCTCTGCAAGCTACTTCATAATGAAATGTCAGTGGGCGCGCTGGCAAAAGCTATTGATCTCAGCC
AGTCTGCACTTTCACAACATCTGGCCAAGCTGCGGGCTCTCGATCTCGTCTCGACGCGGCGCGATGCTCAGACCATCTAT
TATATGGTTTCTTCGCCACACATCGAATTGATGTTGTCGACGCTCTCCGGCCTCTATATGAGTCCCACACCACGCCGGCG
TGAAATGATGGCGGTGGCGCACCAATAA

Upstream 100 bases:

>100_bases
CTTCTCAAACCCAATATATAGTATTAATTTTAACGGGCTCAAACAGAAAAACTTGGGTGTATTTTTAACTTCATGCAGTC
TTACGGGGGTATGACGGCAA

Downstream 100 bases:

>100_bases
ACCACATCCCATGAGGCCGCAGCCGTGCGATGCAGGATATAGATACCAGATCGCACGACTGCGTCTTTGTAATCGATGAC
GCGGACGACATTCGCCTCGC

Product: nodulation protein nolR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 115; Mature: 114

Protein sequence:

>115_residues
MTNKVTFYDLVENADQAADFLSALANNKRLLILCKLLHNEMSVGALAKAIDLSQSALSQHLAKLRALDLVSTRRDAQTIY
YMVSSPHIELMLSTLSGLYMSPTPRRREMMAVAHQ

Sequences:

>Translated_115_residues
MTNKVTFYDLVENADQAADFLSALANNKRLLILCKLLHNEMSVGALAKAIDLSQSALSQHLAKLRALDLVSTRRDAQTIY
YMVSSPHIELMLSTLSGLYMSPTPRRREMMAVAHQ
>Mature_114_residues
TNKVTFYDLVENADQAADFLSALANNKRLLILCKLLHNEMSVGALAKAIDLSQSALSQHLAKLRALDLVSTRRDAQTIYY
MVSSPHIELMLSTLSGLYMSPTPRRREMMAVAHQ

Specific function: Negative transacting factor controlling the nod regulon. May control the expression of nodD1, nodD2, nodD3 and nodABC genes [H]

COG id: COG0640

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH arsR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789021, Length=91, Percent_Identity=41.7582417582418, Blast_Score=66, Evalue=6e-13,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001845
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01022 HTH_5 [H]

EC number: NA

Molecular weight: Translated: 12850; Mature: 12719

Theoretical pI: Translated: 9.09; Mature: 9.09

Prosite motif: PS50987 HTH_ARSR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNKVTFYDLVENADQAADFLSALANNKRLLILCKLLHNEMSVGALAKAIDLSQSALSQH
CCCCCHHHHHHHCHHHHHHHHHHHHCCCCCEEHHHHHHCCCCHHHHHHHHHHHHHHHHHH
LAKLRALDLVSTRRDAQTIYYMVSSPHIELMLSTLSGLYMSPTPRRREMMAVAHQ
HHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCHHHHHHHCCC
>Mature Secondary Structure 
TNKVTFYDLVENADQAADFLSALANNKRLLILCKLLHNEMSVGALAKAIDLSQSALSQH
CCCCHHHHHHHCHHHHHHHHHHHHCCCCCEEHHHHHHCCCCHHHHHHHHHHHHHHHHHH
LAKLRALDLVSTRRDAQTIYYMVSSPHIELMLSTLSGLYMSPTPRRREMMAVAHQ
HHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1840615 [H]