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The map label for this gene is ypfJ [H]

Identifier: 225852966

GI number: 225852966

Start: 1461183

End: 1462109

Strand: Reverse

Name: ypfJ [H]

Synonym: BMEA_A1538

Alternate gene names: 225852966

Gene position: 1462109-1461183 (Counterclockwise)

Preceding gene: 225852967

Following gene: 225852964

Centisome position: 68.78

GC content: 61.38

Gene sequence:

>927_bases
ATGCGCTGGCAAGGCCGTAGGCAAAGCGACAATGTTGAAGATCTGCGCGGTGAGCAGGGTGGTGTGGTTGGCGGCGGCTT
CGGCCGCGGGGGTGGTTTCGGCGGCCCCGGCTTCAGGATCGTGCGCGGCGGTGGAATTTCCGGCATTCTCATTCTCGTCG
TCATGTTCTTCGTGTTGCGCGCGGTTGGCATCGATCCGATGCCCATCCTCTTTGGCGACGGCAGCATGAGCCCGACCGTG
CAGACGCAAGGCACGGGCCGCACGGTGGCTGAAGGCGGCACTGTCGCCAATGACGAGACGACGCAGTTCGCCCGCACCGT
TCTGGCCGAGACAGAAGATGTCTGGAGCGGTATTTTCCAGTCGCGCGGCCAGACCTATACGCCGCCGACGATGGTGCTGT
TTTCCGATCAGGTCCGTTCGGCCTGCGGCTATGCTTCGGCTGCTTCCGGCCCGTTCTACTGTCCCGGCGACCGTAAGCTT
TATATCGACCTCAGCTTCTACAAGGAGCTTGCCAATCGCTTTGGCGCTTCGGGCGATTTCGCGCAGGCCTATGTTCTGGC
GCATGAAGTGGGCCACCATGTCCAGAATCTTCTGGGCATCCTGCCGAAATTCAACCAGATGCGCCAGCAGATGAGCGAGG
CGCAGGCCAACCAGACGTCGGTGCGCGTCGAGCTTCAGGCCGATTGCCTTGCGGGCGTATGGGGCCACTACACAGACCAG
AAGGGCATTCTGGAAGCGGGCGACCTTGAGGAAGCCTTGAACGCGGCGCATCAGATCGGTGATGACACATTACAGCGTCG
CAGCCAGGGCTATGTCGTACCGGAAAGCTTCAACCATGGCACCTCCGCGCAACGCGCCAAGTGGTTCCAGCGTGGGTTCG
ATAGCGGTCAGCTTGGATCGTGTGACACGTTCAGCGGCGATGTTTAG

Upstream 100 bases:

>100_bases
CTTTTTATGTTGCCGTGCGAACTCTTTATGCGACAATTACCTATGATGAAATGATGCCGTTTTGTTCAAGGCGGCGCGGA
GCAGGGGGAGTGGTTGTTCA

Downstream 100 bases:

>100_bases
AGCGCGTTTCGATCTGATTGAATCAGACCGGCGCTCTAATCCTTTGTTTTGACGCGCATATTTTCCGAAAACCGTTTCAC
ACTTTTCAGGATGCGCTCTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 308

Protein sequence:

>308_residues
MRWQGRRQSDNVEDLRGEQGGVVGGGFGRGGGFGGPGFRIVRGGGISGILILVVMFFVLRAVGIDPMPILFGDGSMSPTV
QTQGTGRTVAEGGTVANDETTQFARTVLAETEDVWSGIFQSRGQTYTPPTMVLFSDQVRSACGYASAASGPFYCPGDRKL
YIDLSFYKELANRFGASGDFAQAYVLAHEVGHHVQNLLGILPKFNQMRQQMSEAQANQTSVRVELQADCLAGVWGHYTDQ
KGILEAGDLEEALNAAHQIGDDTLQRRSQGYVVPESFNHGTSAQRAKWFQRGFDSGQLGSCDTFSGDV

Sequences:

>Translated_308_residues
MRWQGRRQSDNVEDLRGEQGGVVGGGFGRGGGFGGPGFRIVRGGGISGILILVVMFFVLRAVGIDPMPILFGDGSMSPTV
QTQGTGRTVAEGGTVANDETTQFARTVLAETEDVWSGIFQSRGQTYTPPTMVLFSDQVRSACGYASAASGPFYCPGDRKL
YIDLSFYKELANRFGASGDFAQAYVLAHEVGHHVQNLLGILPKFNQMRQQMSEAQANQTSVRVELQADCLAGVWGHYTDQ
KGILEAGDLEEALNAAHQIGDDTLQRRSQGYVVPESFNHGTSAQRAKWFQRGFDSGQLGSCDTFSGDV
>Mature_308_residues
MRWQGRRQSDNVEDLRGEQGGVVGGGFGRGGGFGGPGFRIVRGGGISGILILVVMFFVLRAVGIDPMPILFGDGSMSPTV
QTQGTGRTVAEGGTVANDETTQFARTVLAETEDVWSGIFQSRGQTYTPPTMVLFSDQVRSACGYASAASGPFYCPGDRKL
YIDLSFYKELANRFGASGDFAQAYVLAHEVGHHVQNLLGILPKFNQMRQQMSEAQANQTSVRVELQADCLAGVWGHYTDQ
KGILEAGDLEEALNAAHQIGDDTLQRRSQGYVVPESFNHGTSAQRAKWFQRGFDSGQLGSCDTFSGDV

Specific function: Unknown

COG id: COG2321

COG function: function code R; Predicted metalloprotease

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788819, Length=308, Percent_Identity=50.3246753246753, Blast_Score=293, Evalue=1e-80,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007343 [H]

Pfam domain/function: PF04228 Zn_peptidase [H]

EC number: NA

Molecular weight: Translated: 33208; Mature: 33208

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRWQGRRQSDNVEDLRGEQGGVVGGGFGRGGGFGGPGFRIVRGGGISGILILVVMFFVLR
CCCCCCCCCCCHHHHCCCCCCEEECCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHH
AVGIDPMPILFGDGSMSPTVQTQGTGRTVAEGGTVANDETTQFARTVLAETEDVWSGIFQ
HHCCCCCEEEEECCCCCCCEEECCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
SRGQTYTPPTMVLFSDQVRSACGYASAASGPFYCPGDRKLYIDLSFYKELANRFGASGDF
HCCCCCCCCEEEEECHHHHHHHCCCCCCCCCEECCCCCEEEEEHHHHHHHHHHCCCCCCH
AQAYVLAHEVGHHVQNLLGILPKFNQMRQQMSEAQANQTSVRVELQADCLAGVWGHYTDQ
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHCCCCC
KGILEAGDLEEALNAAHQIGDDTLQRRSQGYVVPESFNHGTSAQRAKWFQRGFDSGQLGS
CCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCC
CDTFSGDV
CCCCCCCC
>Mature Secondary Structure
MRWQGRRQSDNVEDLRGEQGGVVGGGFGRGGGFGGPGFRIVRGGGISGILILVVMFFVLR
CCCCCCCCCCCHHHHCCCCCCEEECCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHH
AVGIDPMPILFGDGSMSPTVQTQGTGRTVAEGGTVANDETTQFARTVLAETEDVWSGIFQ
HHCCCCCEEEEECCCCCCCEEECCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
SRGQTYTPPTMVLFSDQVRSACGYASAASGPFYCPGDRKLYIDLSFYKELANRFGASGDF
HCCCCCCCCEEEEECHHHHHHHCCCCCCCCCEECCCCCEEEEEHHHHHHHHHHCCCCCCH
AQAYVLAHEVGHHVQNLLGILPKFNQMRQQMSEAQANQTSVRVELQADCLAGVWGHYTDQ
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHCCCCC
KGILEAGDLEEALNAAHQIGDDTLQRRSQGYVVPESFNHGTSAQRAKWFQRGFDSGQLGS
CCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCC
CDTFSGDV
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]