Click here to switch to the map view.

The map label for this gene is bphA1 [H]

Identifier: 225852941

GI number: 225852941

Start: 1439037

End: 1440284

Strand: Direct

Name: bphA1 [H]

Synonym: BMEA_A1511

Alternate gene names: 225852941

Gene position: 1439037-1440284 (Clockwise)

Preceding gene: 225852939

Following gene: 225852942

Centisome position: 67.7

GC content: 57.13

Gene sequence:

>1248_bases
ATGGACGTTCGCAACGAAATGCTGGAGCTTTTGACCGGGCGCGACCCCAATTTCAGCCTGGAGCAGAAATTCTACACCGA
CCCCGATTATTACAAGCTTGATCTGGAAAATATTTTCTACAAGGACTGGCTATTCGTCGGCCATGATTGCGAACTGCCCA
AGACCGGCTCCTACATGACCGTACAGATTGGCGCCTATCCTGTCATCATCGTGCGCGATGCGCAGGGCGGCATTCGCGCG
TTCCATAATTCGTGCCGCCATCGCGGCTCGCGTATTTGTTCCGCGGAGAAGGGAACGGCGGCAAAGCTCGTATGCCCCTA
TCACCAGTGGACCTACGAGCTTGATGGCCGCCTGCTCTTCGCGCGTCAGGTCGGGCCAGATTTCAAGCCCGCCGACTATG
GCCTGAAGCCGGTTCATTGCGAAACGGTGGCGGGCTATATCTATATTTGCGTTGCCGAGGAAGCGCCGGATTTTGCGGCT
TTCCGCAATCTGGTTGAGCCTTATCTTGCACCGCACAACATCAAGGACGCCAAGGTTACCTTTGAAAGCTCGATCATCGA
GAAGGGCAATTGGAAGCTGGTGTGGGAAAACAACCGCGAGTGCTATCACTGCGCTGCCAACCACCCGGAGCTTTGCCGCA
CCTATCCCGAAGCGCCGACAGCAACCGGTGTGCAGGGCGTCATGGAAGACCCGGAAATCAACCAGCTCTGGAAAAGCTGC
GCCAGTATCGGCCTGCCCGCCCGGTTCAACATATCCGAAGACGGGCGTTACCGCATAACCCGCATCCCGCTTCTGCGCGA
TGCGGTGAGTTACACCATGTCCGGCAAGGCGGCGGTCAAGAAGTCTCTCAGCGACAAGGTTGCGGGCAGCACAAATATCG
GCGCGATGCTTCTGTTCAACTATCCATCCACCTGGAACCATTTGATGGCGGACCACGCGATTTCCTTCCGTGTCCTGCCG
ATCAGCGCGGAAGAAACCCTCGTCACCACCAAATGGCTGGTCCACAAGGATGCGGTGGAAGGCGTCGATTACGATCTTGA
TGAGCTGACCCATGTATGGATCCAGCCCAACGATCAAGACCGGAAGATCGTGGAGGAGAATGCCGTTGGCATCCACTCTC
CCGCCTATCAGCCCGGCCCCTATTCGGTTGAGCATGAAGGCGGTGTGATGCAGTTCCTGGAATGGTATACCAATACCATG
ACGCCGCGCCTGCGTGGCGAAGCGGCAAAACTCAGCCGCGTCGCCTGA

Upstream 100 bases:

>100_bases
AAGCCGCGCTTCTGTAAGACAAAGGGAACATCGGATCGGGCCCAGGTCGCTGAGAGAACAGCAAAGGCCGGTCCAGAGAT
GAAAGCAAAGGTTCGGACCT

Downstream 100 bases:

>100_bases
TAATGTGACAAGAATTTGAGAAGTGAGAAGGCCATGCAGCCTCTGAAATATCTGGATGAGATGCTGCCGTGGAACGACCG
GCTACAGATGCTGGAATGCA

Product: biphenyl dioxygenase subunit alpha

Products: NA

Alternate protein names: Biphenyl 2,3-dioxygenase [H]

Number of amino acids: Translated: 415; Mature: 415

Protein sequence:

>415_residues
MDVRNEMLELLTGRDPNFSLEQKFYTDPDYYKLDLENIFYKDWLFVGHDCELPKTGSYMTVQIGAYPVIIVRDAQGGIRA
FHNSCRHRGSRICSAEKGTAAKLVCPYHQWTYELDGRLLFARQVGPDFKPADYGLKPVHCETVAGYIYICVAEEAPDFAA
FRNLVEPYLAPHNIKDAKVTFESSIIEKGNWKLVWENNRECYHCAANHPELCRTYPEAPTATGVQGVMEDPEINQLWKSC
ASIGLPARFNISEDGRYRITRIPLLRDAVSYTMSGKAAVKKSLSDKVAGSTNIGAMLLFNYPSTWNHLMADHAISFRVLP
ISAEETLVTTKWLVHKDAVEGVDYDLDELTHVWIQPNDQDRKIVEENAVGIHSPAYQPGPYSVEHEGGVMQFLEWYTNTM
TPRLRGEAAKLSRVA

Sequences:

>Translated_415_residues
MDVRNEMLELLTGRDPNFSLEQKFYTDPDYYKLDLENIFYKDWLFVGHDCELPKTGSYMTVQIGAYPVIIVRDAQGGIRA
FHNSCRHRGSRICSAEKGTAAKLVCPYHQWTYELDGRLLFARQVGPDFKPADYGLKPVHCETVAGYIYICVAEEAPDFAA
FRNLVEPYLAPHNIKDAKVTFESSIIEKGNWKLVWENNRECYHCAANHPELCRTYPEAPTATGVQGVMEDPEINQLWKSC
ASIGLPARFNISEDGRYRITRIPLLRDAVSYTMSGKAAVKKSLSDKVAGSTNIGAMLLFNYPSTWNHLMADHAISFRVLP
ISAEETLVTTKWLVHKDAVEGVDYDLDELTHVWIQPNDQDRKIVEENAVGIHSPAYQPGPYSVEHEGGVMQFLEWYTNTM
TPRLRGEAAKLSRVA
>Mature_415_residues
MDVRNEMLELLTGRDPNFSLEQKFYTDPDYYKLDLENIFYKDWLFVGHDCELPKTGSYMTVQIGAYPVIIVRDAQGGIRA
FHNSCRHRGSRICSAEKGTAAKLVCPYHQWTYELDGRLLFARQVGPDFKPADYGLKPVHCETVAGYIYICVAEEAPDFAA
FRNLVEPYLAPHNIKDAKVTFESSIIEKGNWKLVWENNRECYHCAANHPELCRTYPEAPTATGVQGVMEDPEINQLWKSC
ASIGLPARFNISEDGRYRITRIPLLRDAVSYTMSGKAAVKKSLSDKVAGSTNIGAMLLFNYPSTWNHLMADHAISFRVLP
ISAEETLVTTKWLVHKDAVEGVDYDLDELTHVWIQPNDQDRKIVEENAVGIHSPAYQPGPYSVEHEGGVMQFLEWYTNTM
TPRLRGEAAKLSRVA

Specific function: Unknown

COG id: COG4638

COG function: function code PR; Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Escherichia coli, GI1788103, Length=201, Percent_Identity=32.3383084577114, Blast_Score=117, Evalue=2e-27,
Organism=Escherichia coli, GI1788888, Length=158, Percent_Identity=35.4430379746835, Blast_Score=107, Evalue=1e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941
- InterPro:   IPR015881
- InterPro:   IPR015879
- InterPro:   IPR001663 [H]

Pfam domain/function: PF00355 Rieske; PF00848 Ring_hydroxyl_A [H]

EC number: =1.14.12.18 [H]

Molecular weight: Translated: 46994; Mature: 46994

Theoretical pI: Translated: 6.02; Mature: 6.02

Prosite motif: PS00290 IG_MHC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVRNEMLELLTGRDPNFSLEQKFYTDPDYYKLDLENIFYKDWLFVGHDCELPKTGSYMT
CCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEHHHEEEEEEEEECCCCCCCCCCCEEE
VQIGAYPVIIVRDAQGGIRAFHNSCRHRGSRICSAEKGTAAKLVCPYHQWTYELDGRLLF
EEECCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEEECCEEEE
ARQVGPDFKPADYGLKPVHCETVAGYIYICVAEEAPDFAAFRNLVEPYLAPHNIKDAKVT
EECCCCCCCCCCCCCCCEEHEEECCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCEEE
FESSIIEKGNWKLVWENNRECYHCAANHPELCRTYPEAPTATGVQGVMEDPEINQLWKSC
EHHHHHCCCCEEEEEECCCCEEEECCCCHHHHHCCCCCCCCCCCHHCCCCCCHHHHHHHH
ASIGLPARFNISEDGRYRITRIPLLRDAVSYTMSGKAAVKKSLSDKVAGSTNIGAMLLFN
HHCCCCEEECCCCCCCEEEEECCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEEC
YPSTWNHLMADHAISFRVLPISAEETLVTTKWLVHKDAVEGVDYDLDELTHVWIQPNDQD
CCCHHHHHHHCCCEEEEEEEECCCCEEEEHHHHHHHHHHCCCCCCHHHCEEEEECCCCCC
RKIVEENAVGIHSPAYQPGPYSVEHEGGVMQFLEWYTNTMTPRLRGEAAKLSRVA
CHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHCCC
>Mature Secondary Structure
MDVRNEMLELLTGRDPNFSLEQKFYTDPDYYKLDLENIFYKDWLFVGHDCELPKTGSYMT
CCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEHHHEEEEEEEEECCCCCCCCCCCEEE
VQIGAYPVIIVRDAQGGIRAFHNSCRHRGSRICSAEKGTAAKLVCPYHQWTYELDGRLLF
EEECCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEEECCEEEE
ARQVGPDFKPADYGLKPVHCETVAGYIYICVAEEAPDFAAFRNLVEPYLAPHNIKDAKVT
EECCCCCCCCCCCCCCCEEHEEECCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCEEE
FESSIIEKGNWKLVWENNRECYHCAANHPELCRTYPEAPTATGVQGVMEDPEINQLWKSC
EHHHHHCCCCEEEEEECCCCEEEECCCCHHHHHCCCCCCCCCCCHHCCCCCCHHHHHHHH
ASIGLPARFNISEDGRYRITRIPLLRDAVSYTMSGKAAVKKSLSDKVAGSTNIGAMLLFN
HHCCCCEEECCCCCCCEEEEECCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEEC
YPSTWNHLMADHAISFRVLPISAEETLVTTKWLVHKDAVEGVDYDLDELTHVWIQPNDQD
CCCHHHHHHHCCCEEEEEEEECCCCEEEEHHHHHHHHHHCCCCCCHHHCEEEEECCCCCC
RKIVEENAVGIHSPAYQPGPYSVEHEGGVMQFLEWYTNTMTPRLRGEAAKLSRVA
CHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8048958 [H]