Click here to switch to the map view.

The map label for this gene is ureD2 [H]

Identifier: 225852845

GI number: 225852845

Start: 1341749

End: 1342657

Strand: Direct

Name: ureD2 [H]

Synonym: BMEA_A1409

Alternate gene names: 225852845

Gene position: 1341749-1342657 (Clockwise)

Preceding gene: 225852844

Following gene: 225852846

Centisome position: 63.12

GC content: 57.87

Gene sequence:

>909_bases
ATGCTTGGCAAGGCGCGGGAACTGGCAAATTATCAGGATGAGCCGGAACAGTTACCCACCGGCTCGTTCGGCAAGAACGC
CTTCCTGCGCCTTGGCTTTGAACGCCGGCCCGAGCGCACGGTGCTTGCCACGCTGCACCGCCGCGCGCCGCTGATCGTGC
AGCAGGCGCTTTACTGGGATGAGGGAATGCCGACGCTTCCCTGCGTCAGCATCATTTCCAATGCAGGCGGCATCCTGCAA
GGCGACCGCTACGCAATCGAAATCGACCTGGAGCCGGACACGCAGGCACATGTCACCACGCAGTCGGCCACCCGTATTCA
GGAAATGGACGCGAATTTCGCAACCCAGACCCAGACCATAACGCTTGGCGCGAATTCCTATCTCGAATATATCCCCCACC
CGATCATTCCGCACAAACACTCCCGTTTCGTGCAGCAAACCGAAGTCACGATCCATCCGACGGCAACACTGATCTATTCC
GAAGTCCTGATGGCGGGCCGTAAATATTACGGCACCGGCGAACTGTTCCATTACGATCTGTTCTCATCGAAATTTCATGC
TGCACACACGGATGGAACTTCGCTTTTCACGGAAAAATTCATCGTCGAACCGGCGCGCGGCAATGTTTCCCGCCTTGGCG
CCATGGGTTCATTCCACGTTTTCGGCAATCTCATCCTGCTCACGCCGAAAACCCATGCAGACCGGCTTTTCGAGACAATC
GATCCGGTTTTCGACATGGATGAAGGAATTGCCTGGGGGGCAAGCCGCCTGCCCAACGATGCGGGACTTCTGTTCAAGGT
ACTGGGCATGGAAAGCGCGCCTGTACGCGCGGCGATCCGCAAAATCTGGGAAGCCGCGCGCCAGGAAGTCACCGGCGCAA
GCCTGCCCGAAAACTTCCTCTGGGCATAG

Upstream 100 bases:

>100_bases
TCTTCACCAATTGCAAGACGAACGAAGGCATTGACGATCTTGTGCACCTGATCCGTGAAAACGTCCTTTTCGACACCGAG
GTCAGCAAGGAGAGTGCATA

Downstream 100 bases:

>100_bases
GAGGCCTCCATGGCAGACGCCCCGTCACGCTGGTCTGAAATCGTCGAAGGCAATTCCCTTATCCGTTTCATTGACATCAA
TCTGCGCGGCGCAGGGCAGG

Product: urease accessory protein UreD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MLGKARELANYQDEPEQLPTGSFGKNAFLRLGFERRPERTVLATLHRRAPLIVQQALYWDEGMPTLPCVSIISNAGGILQ
GDRYAIEIDLEPDTQAHVTTQSATRIQEMDANFATQTQTITLGANSYLEYIPHPIIPHKHSRFVQQTEVTIHPTATLIYS
EVLMAGRKYYGTGELFHYDLFSSKFHAAHTDGTSLFTEKFIVEPARGNVSRLGAMGSFHVFGNLILLTPKTHADRLFETI
DPVFDMDEGIAWGASRLPNDAGLLFKVLGMESAPVRAAIRKIWEAARQEVTGASLPENFLWA

Sequences:

>Translated_302_residues
MLGKARELANYQDEPEQLPTGSFGKNAFLRLGFERRPERTVLATLHRRAPLIVQQALYWDEGMPTLPCVSIISNAGGILQ
GDRYAIEIDLEPDTQAHVTTQSATRIQEMDANFATQTQTITLGANSYLEYIPHPIIPHKHSRFVQQTEVTIHPTATLIYS
EVLMAGRKYYGTGELFHYDLFSSKFHAAHTDGTSLFTEKFIVEPARGNVSRLGAMGSFHVFGNLILLTPKTHADRLFETI
DPVFDMDEGIAWGASRLPNDAGLLFKVLGMESAPVRAAIRKIWEAARQEVTGASLPENFLWA
>Mature_302_residues
MLGKARELANYQDEPEQLPTGSFGKNAFLRLGFERRPERTVLATLHRRAPLIVQQALYWDEGMPTLPCVSIISNAGGILQ
GDRYAIEIDLEPDTQAHVTTQSATRIQEMDANFATQTQTITLGANSYLEYIPHPIIPHKHSRFVQQTEVTIHPTATLIYS
EVLMAGRKYYGTGELFHYDLFSSKFHAAHTDGTSLFTEKFIVEPARGNVSRLGAMGSFHVFGNLILLTPKTHADRLFETI
DPVFDMDEGIAWGASRLPNDAGLLFKVLGMESAPVRAAIRKIWEAARQEVTGASLPENFLWA

Specific function: Disrupting the ure2 operon has no effect on urease activity or pathogen survival in BALB/c mice when administered orally [H]

COG id: COG0829

COG function: function code O; Urease accessory protein UreH

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ureD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002669 [H]

Pfam domain/function: PF01774 UreD [H]

EC number: NA

Molecular weight: Translated: 33686; Mature: 33686

Theoretical pI: Translated: 6.29; Mature: 6.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGKARELANYQDEPEQLPTGSFGKNAFLRLGFERRPERTVLATLHRRAPLIVQQALYWD
CCCCHHHHHCCCCCHHHCCCCCCCCCCEEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHC
EGMPTLPCVSIISNAGGILQGDRYAIEIDLEPDTQAHVTTQSATRIQEMDANFATQTQTI
CCCCHHHHHHHHHCCCCEEECCEEEEEEEECCCCCEEEEHHHHHHHHHHCCCCCCCEEEE
TLGANSYLEYIPHPIIPHKHSRFVQQTEVTIHPTATLIYSEVLMAGRKYYGTGELFHYDL
EECCHHHHHHCCCCCCCCCHHHHHHHCEEEECCHHHHHHHHHHHHCCCCCCCCCEEEEEH
FSSKFHAAHTDGTSLFTEKFIVEPARGNVSRLGAMGSFHVFGNLILLTPKTHADRLFETI
HCCCCCCCCCCCHHHHHHHHEECCCCCCHHHHCCCCCCHHHCCEEEECCCHHHHHHHHHH
DPVFDMDEGIAWGASRLPNDAGLLFKVLGMESAPVRAAIRKIWEAARQEVTGASLPENFL
HHHHCCCCCCCCCHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHC
WA
CC
>Mature Secondary Structure
MLGKARELANYQDEPEQLPTGSFGKNAFLRLGFERRPERTVLATLHRRAPLIVQQALYWD
CCCCHHHHHCCCCCHHHCCCCCCCCCCEEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHC
EGMPTLPCVSIISNAGGILQGDRYAIEIDLEPDTQAHVTTQSATRIQEMDANFATQTQTI
CCCCHHHHHHHHHCCCCEEECCEEEEEEEECCCCCEEEEHHHHHHHHHHCCCCCCCEEEE
TLGANSYLEYIPHPIIPHKHSRFVQQTEVTIHPTATLIYSEVLMAGRKYYGTGELFHYDL
EECCHHHHHHCCCCCCCCCHHHHHHHCEEEECCHHHHHHHHHHHHCCCCCCCCCEEEEEH
FSSKFHAAHTDGTSLFTEKFIVEPARGNVSRLGAMGSFHVFGNLILLTPKTHADRLFETI
HCCCCCCCCCCCHHHHHHHHEECCCCCCHHHHCCCCCCHHHCCEEEECCCHHHHHHHHHH
DPVFDMDEGIAWGASRLPNDAGLLFKVLGMESAPVRAAIRKIWEAARQEVTGASLPENFL
HHHHCCCCCCCCCHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHC
WA
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA