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The map label for this gene is yddW [H]

Identifier: 225852837

GI number: 225852837

Start: 1335036

End: 1336331

Strand: Reverse

Name: yddW [H]

Synonym: BMEA_A1401

Alternate gene names: 225852837

Gene position: 1336331-1335036 (Counterclockwise)

Preceding gene: 225852838

Following gene: 225852835

Centisome position: 62.87

GC content: 54.63

Gene sequence:

>1296_bases
ATGCACTTCTTCGCGGTGATACCGGATTTGAATTTGAATTTTTTGGCCGGGATGAAAGGAAATCGCGTGTTTGCCGATTG
TGATGCTTTCCATGCGACATGGGTTGCCACGGTTATCAATCTTGATTGGCCATCGAAGCAATCGACGGCGATTGCCGATG
GCGGAAAGCGGGTCATCGCGCAGAAAAGCGAGCTTCTGGCCATACTGGATCGCGCGCAAAAGCTTGGTATCAATGCGGTC
ATCTTTCAGGTTTCGCCCACGGCGGATGCGTTTTATCAATCCTCGATCCTGCCGTGGTCTTCCTATCTCACCGGCGTTCT
GGGCAAGGATCCGGGCTTTGATCCGCTGAAATTCATGATTGCGGAGGCGCATAAGCGGCGCATCGAGGTTCATGCCTGGT
TCAATCCCTATCGCGTTTCGATGGATACCAGCCGTGAAACGCAGGAGGCGTTGAAAAACTCGTCGCCCGATTCTCCGCCA
AGCGTCTATAAGACCCATCCTAAATGGATCGGTGTCGCTTCAAAACGTTATGTGCTGGATCCCGGCATTCCGGCGGTGCG
CGATTGGGTGGGCAATATCGTCGGTGAAGTGGTCCAGAAATATGACGTCGATGGTATCCAGTTCGATGATTATTTCTATA
GCGAAACACCGGATTCGCAGCTTGACGACCGCAAGACATTTGCTCGCTATGGTACGCGCTTCAACAGCAAGGCCGACTGG
CGGCGCTACAACACCTATAAGCTGGTGCAGGACGTGTTTGGCCGGGTCAAGAAAATCCGGCCGACTGTTCGCTTCGGCAT
CAGCCCCGGCGGGATGTGGCGCAACAGGAAGGACGATCCGCTCGGTTCCGATACGCTTGCGGGCGCTACCAATTACGACA
GCGATTTTGCCGATACCCGGCGCTGGGTCAAAGACGGCATCGTCGATTATATCGCTCCGCAGGTTTATTGGCCGCTTGAA
CGCGAGGCCGCGCCTTATGGAACCATTGTGAAATGGTGGGCGCAAACCGTGCGCGGCACGCCAGTCGATCTTTATATCGG
AATGGCGCTCTATAAGGCGGGCGAAACTTACCGGCTTGAGCCGCAATGGGCCGCAGAGGAAGGGTTTACGGAAATCAGGC
GCGAGCTTGAGCTGAATGAATCCGTGCCGGAGGTGAAGGGAAGCCTCCTTTTTCGTGAATCCTTTCTCAGGGAACCGAAG
CTGCGGAAAATAACAGATTATCTGGCGAGAAACTGGGGCGGCTGCGCCCGGCACAAGGACGCGCCCGCACAGAAGAAAGC
TAAAAATCCATTTTAA

Upstream 100 bases:

>100_bases
TATTTTCATGCGTTAGCCAATCCACCTGTTTATGGGTGCTTCGGAGAAGTAATGCGTGAATAATTTTGGGCTTATCTGCG
ATTCGGGCCAATGAAAATGG

Downstream 100 bases:

>100_bases
ATCAATGGCTTATGTTTGATGTCAACTTAAATCGCAATATTTGATTGAAATCAAGGAGCTTTTTTAAAGCGAGTGCTAAT
AGTGTTTTCGTTGCCCGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 431; Mature: 431

Protein sequence:

>431_residues
MHFFAVIPDLNLNFLAGMKGNRVFADCDAFHATWVATVINLDWPSKQSTAIADGGKRVIAQKSELLAILDRAQKLGINAV
IFQVSPTADAFYQSSILPWSSYLTGVLGKDPGFDPLKFMIAEAHKRRIEVHAWFNPYRVSMDTSRETQEALKNSSPDSPP
SVYKTHPKWIGVASKRYVLDPGIPAVRDWVGNIVGEVVQKYDVDGIQFDDYFYSETPDSQLDDRKTFARYGTRFNSKADW
RRYNTYKLVQDVFGRVKKIRPTVRFGISPGGMWRNRKDDPLGSDTLAGATNYDSDFADTRRWVKDGIVDYIAPQVYWPLE
REAAPYGTIVKWWAQTVRGTPVDLYIGMALYKAGETYRLEPQWAAEEGFTEIRRELELNESVPEVKGSLLFRESFLREPK
LRKITDYLARNWGGCARHKDAPAQKKAKNPF

Sequences:

>Translated_431_residues
MHFFAVIPDLNLNFLAGMKGNRVFADCDAFHATWVATVINLDWPSKQSTAIADGGKRVIAQKSELLAILDRAQKLGINAV
IFQVSPTADAFYQSSILPWSSYLTGVLGKDPGFDPLKFMIAEAHKRRIEVHAWFNPYRVSMDTSRETQEALKNSSPDSPP
SVYKTHPKWIGVASKRYVLDPGIPAVRDWVGNIVGEVVQKYDVDGIQFDDYFYSETPDSQLDDRKTFARYGTRFNSKADW
RRYNTYKLVQDVFGRVKKIRPTVRFGISPGGMWRNRKDDPLGSDTLAGATNYDSDFADTRRWVKDGIVDYIAPQVYWPLE
REAAPYGTIVKWWAQTVRGTPVDLYIGMALYKAGETYRLEPQWAAEEGFTEIRRELELNESVPEVKGSLLFRESFLREPK
LRKITDYLARNWGGCARHKDAPAQKKAKNPF
>Mature_431_residues
MHFFAVIPDLNLNFLAGMKGNRVFADCDAFHATWVATVINLDWPSKQSTAIADGGKRVIAQKSELLAILDRAQKLGINAV
IFQVSPTADAFYQSSILPWSSYLTGVLGKDPGFDPLKFMIAEAHKRRIEVHAWFNPYRVSMDTSRETQEALKNSSPDSPP
SVYKTHPKWIGVASKRYVLDPGIPAVRDWVGNIVGEVVQKYDVDGIQFDDYFYSETPDSQLDDRKTFARYGTRFNSKADW
RRYNTYKLVQDVFGRVKKIRPTVRFGISPGGMWRNRKDDPLGSDTLAGATNYDSDFADTRRWVKDGIVDYIAPQVYWPLE
REAAPYGTIVKWWAQTVRGTPVDLYIGMALYKAGETYRLEPQWAAEEGFTEIRRELELNESVPEVKGSLLFRESFLREPK
LRKITDYLARNWGGCARHKDAPAQKKAKNPF

Specific function: Unknown

COG id: COG1649

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0748 family [H]

Homologues:

Organism=Escherichia coli, GI1787767, Length=384, Percent_Identity=51.0416666666667, Blast_Score=425, Evalue=1e-120,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003790
- InterPro:   IPR017853
- InterPro:   IPR013781 [H]

Pfam domain/function: PF02638 DUF187 [H]

EC number: NA

Molecular weight: Translated: 49116; Mature: 49116

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHFFAVIPDLNLNFLAGMKGNRVFADCDAFHATWVATVINLDWPSKQSTAIADGGKRVIA
CCEEEEECCCCCCEEECCCCCEEEECCHHHHHHHHHHHEECCCCCCCCCEECCCCHHHHH
QKSELLAILDRAQKLGINAVIFQVSPTADAFYQSSILPWSSYLTGVLGKDPGFDPLKFMI
HHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHH
AEAHKRRIEVHAWFNPYRVSMDTSRETQEALKNSSPDSPPSVYKTHPKWIGVASKRYVLD
HHHHHCEEEEEEECCCEEEEECCCHHHHHHHHCCCCCCCCCCEECCCCEEECCCCCEEEC
PGIPAVRDWVGNIVGEVVQKYDVDGIQFDDYFYSETPDSQLDDRKTFARYGTRFNSKADW
CCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCH
RRYNTYKLVQDVFGRVKKIRPTVRFGISPGGMWRNRKDDPLGSDTLAGATNYDSDFADTR
HHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
RWVKDGIVDYIAPQVYWPLEREAAPYGTIVKWWAQTVRGTPVDLYIGMALYKAGETYRLE
HHHHHHHHHHHCCHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEC
PQWAAEEGFTEIRRELELNESVPEVKGSLLFRESFLREPKLRKITDYLARNWGGCARHKD
CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCC
APAQKKAKNPF
CCCHHHCCCCC
>Mature Secondary Structure
MHFFAVIPDLNLNFLAGMKGNRVFADCDAFHATWVATVINLDWPSKQSTAIADGGKRVIA
CCEEEEECCCCCCEEECCCCCEEEECCHHHHHHHHHHHEECCCCCCCCCEECCCCHHHHH
QKSELLAILDRAQKLGINAVIFQVSPTADAFYQSSILPWSSYLTGVLGKDPGFDPLKFMI
HHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHH
AEAHKRRIEVHAWFNPYRVSMDTSRETQEALKNSSPDSPPSVYKTHPKWIGVASKRYVLD
HHHHHCEEEEEEECCCEEEEECCCHHHHHHHHCCCCCCCCCCEECCCCEEECCCCCEEEC
PGIPAVRDWVGNIVGEVVQKYDVDGIQFDDYFYSETPDSQLDDRKTFARYGTRFNSKADW
CCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCH
RRYNTYKLVQDVFGRVKKIRPTVRFGISPGGMWRNRKDDPLGSDTLAGATNYDSDFADTR
HHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
RWVKDGIVDYIAPQVYWPLEREAAPYGTIVKWWAQTVRGTPVDLYIGMALYKAGETYRLE
HHHHHHHHHHHCCHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEC
PQWAAEEGFTEIRRELELNESVPEVKGSLLFRESFLREPKLRKITDYLARNWGGCARHKD
CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCC
APAQKKAKNPF
CCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]