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The map label for this gene is rbsB [C]

Identifier: 225852827

GI number: 225852827

Start: 1322147

End: 1323076

Strand: Reverse

Name: rbsB [C]

Synonym: BMEA_A1389

Alternate gene names: 225852827

Gene position: 1323076-1322147 (Counterclockwise)

Preceding gene: 225852829

Following gene: 225852826

Centisome position: 62.24

GC content: 59.78

Gene sequence:

>930_bases
ATGAAATCTCTTTTGAAATCGGCAGTTGCCGGGACAGCCTTGCTTGCAGCCGCCTTTGCAGCGCAGGCGGCTGACATCAA
AATCGTCGTGGTGAGCCATGGTCAGGCCTCCGATCCGTTCTGGTCGGTGGTGAAGAACGGCGTCGCCGAAGCGGCGAAGG
ATACGGGCGTGCAGGTTGAGTATCGTGCGCCGGAAACCTTCGACATGGTGCAGATGGCGCAGCTTATTGACGCCGCGATC
AACCAGAAGCCGCAGGGCCTCGTGGTTTCCATTCCCGATGCCGATGCACTTGGGCCATCCATCGAGCGCGCCGTGGCGGC
GGGTATTCCGGTTATTTCCATGAATTCCGGTTCTGATGCCTCGAAGAAGCTTGGCGCGCTTCTGCATGTCGGGCAGGATG
AGTTCGATGCCGGAAAGGTGGCCGGTGAGGCGCTGAAGAAGGCAGGCGGAAAGAAGGGGATCTGTGTCAATCAGGAGGTG
GGCAATGTCTCGCTCGACCAGCGTTGCGCGGGTTTCAAGGAAGGCTTCGGCGACGTGAAGGTTCTGCCGACATCGGCTGA
TCCGGCTGAAAATGAATCCAAAGTTCGCGCTGCTCTCGCCTCCGATCCGGCGGTGGATACGATCCTGACGCTGAATGCGA
CGCTGGCGGGCGAACCTGCCGTGAAAGCCGCAGCCGAAAGCGGACGCAGCGGCATCCATATCGCGACCTTTGACATGTCG
GCTGGCTTCCTTGAAGCGGTGGAGAAGGGGCAGGCGGGTTTTGCCATCGACCAGCAGCAGTTCCTGCAAGGCTATCTGCC
CGTATCATTCCTCGCACTGAATGCGAAATATGGGCTGATGCCGGGTGGCAACGTCCCGTCCGGCCCGAACCTGATCACCA
AGGACAAGGCCAAGCAGGTGGTGGAATTGTCGGCCAAGGGTATCCGGTAA

Upstream 100 bases:

>100_bases
TTTTCGGGGATAAGGCTTGGAGGAGCGCCCGATAAGACAGGCCGAAGATAAAGGCATTATCGAAACCGGCGGGGAATGCC
GGATAAAGGGAGGAATGAGC

Downstream 100 bases:

>100_bases
GACTGGCTGTTTAGTTCTGGAGCGGTTCCTGTTTTAACAGAATCGTTGGAACCGCTCTATCTCTTTGTTTCTACGCATTA
TCCGGCGCATTGAAGCGGGA

Product: periplasmic binding protein/LacI transcriptional regulator

Products: ADP; phosphate; ribose [Cytoplasm] [C]

Alternate protein names: ABC-Type Sugar Transport System; Sugar ABC Transporter Periplasmic Component-Like Protein; Twin-Arginine Translocation Pathway Signal; ABC Transporter; Sugar ABC Transporter Periplasmic Protein; Lipoprotein

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MKSLLKSAVAGTALLAAAFAAQAADIKIVVVSHGQASDPFWSVVKNGVAEAAKDTGVQVEYRAPETFDMVQMAQLIDAAI
NQKPQGLVVSIPDADALGPSIERAVAAGIPVISMNSGSDASKKLGALLHVGQDEFDAGKVAGEALKKAGGKKGICVNQEV
GNVSLDQRCAGFKEGFGDVKVLPTSADPAENESKVRAALASDPAVDTILTLNATLAGEPAVKAAAESGRSGIHIATFDMS
AGFLEAVEKGQAGFAIDQQQFLQGYLPVSFLALNAKYGLMPGGNVPSGPNLITKDKAKQVVELSAKGIR

Sequences:

>Translated_309_residues
MKSLLKSAVAGTALLAAAFAAQAADIKIVVVSHGQASDPFWSVVKNGVAEAAKDTGVQVEYRAPETFDMVQMAQLIDAAI
NQKPQGLVVSIPDADALGPSIERAVAAGIPVISMNSGSDASKKLGALLHVGQDEFDAGKVAGEALKKAGGKKGICVNQEV
GNVSLDQRCAGFKEGFGDVKVLPTSADPAENESKVRAALASDPAVDTILTLNATLAGEPAVKAAAESGRSGIHIATFDMS
AGFLEAVEKGQAGFAIDQQQFLQGYLPVSFLALNAKYGLMPGGNVPSGPNLITKDKAKQVVELSAKGIR
>Mature_309_residues
MKSLLKSAVAGTALLAAAFAAQAADIKIVVVSHGQASDPFWSVVKNGVAEAAKDTGVQVEYRAPETFDMVQMAQLIDAAI
NQKPQGLVVSIPDADALGPSIERAVAAGIPVISMNSGSDASKKLGALLHVGQDEFDAGKVAGEALKKAGGKKGICVNQEV
GNVSLDQRCAGFKEGFGDVKVLPTSADPAENESKVRAALASDPAVDTILTLNATLAGEPAVKAAAESGRSGIHIATFDMS
AGFLEAVEKGQAGFAIDQQQFLQGYLPVSFLALNAKYGLMPGGNVPSGPNLITKDKAKQVVELSAKGIR

Specific function: Involved In The High-Affinity D-Ribose Membrane Transport System And Also Serves As The Primary Chemoreceptor For Chemotaxis. [C]

COG id: COG1879

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 3940 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 5900 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). 1520 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31695; Mature: 31695

Theoretical pI: Translated: 5.42; Mature: 5.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSLLKSAVAGTALLAAAFAAQAADIKIVVVSHGQASDPFWSVVKNGVAEAAKDTGVQVE
CHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEE
YRAPETFDMVQMAQLIDAAINQKPQGLVVSIPDADALGPSIERAVAAGIPVISMNSGSDA
EECCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHCCHHHHHHHHHCCCEEEECCCCCH
SKKLGALLHVGQDEFDAGKVAGEALKKAGGKKGICVNQEVGNVSLDQRCAGFKEGFGDVK
HHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHCCCCCEE
VLPTSADPAENESKVRAALASDPAVDTILTLNATLAGEPAVKAAAESGRSGIHIATFDMS
EEECCCCCCCCHHHHHHHHHCCCCCEEEEEECCEECCCHHHHHHHHCCCCCEEEEEECCC
AGFLEAVEKGQAGFAIDQQQFLQGYLPVSFLALNAKYGLMPGGNVPSGPNLITKDKAKQV
HHHHHHHHCCCCCCEECHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHH
VELSAKGIR
HHHHCCCCC
>Mature Secondary Structure
MKSLLKSAVAGTALLAAAFAAQAADIKIVVVSHGQASDPFWSVVKNGVAEAAKDTGVQVE
CHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEE
YRAPETFDMVQMAQLIDAAINQKPQGLVVSIPDADALGPSIERAVAAGIPVISMNSGSDA
EECCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHCCHHHHHHHHHCCCEEEECCCCCH
SKKLGALLHVGQDEFDAGKVAGEALKKAGGKKGICVNQEVGNVSLDQRCAGFKEGFGDVK
HHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHCCCCCEE
VLPTSADPAENESKVRAALASDPAVDTILTLNATLAGEPAVKAAAESGRSGIHIATFDMS
EEECCCCCCCCHHHHHHHHHCCCCCEEEEEECCEECCCHHHHHHHHCCCCCEEEEEECCC
AGFLEAVEKGQAGFAIDQQQFLQGYLPVSFLALNAKYGLMPGGNVPSGPNLITKDKAKQV
HHHHHHHHCCCCCCEECHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHH
VELSAKGIR
HHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; ribose [Periplasm]; H2O [C]

Specific reaction: ATP + ribose [Periplasm] + H2O = ADP + phosphate + ribose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA