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The map label for this gene is yabI [H]

Identifier: 225852820

GI number: 225852820

Start: 1316368

End: 1317030

Strand: Reverse

Name: yabI [H]

Synonym: BMEA_A1380

Alternate gene names: 225852820

Gene position: 1317030-1316368 (Counterclockwise)

Preceding gene: 225852823

Following gene: 225852819

Centisome position: 61.96

GC content: 59.28

Gene sequence:

>663_bases
ATGGAAAGCATAATTGGGGATCTAGGGCAGTTTATTTCCGATCACCGGGCGTGGGCCGGGCCAATTGTAGGCGCCATCGC
CTTTGGTGAATCTCTTGCCATCATCGGAATGTTCATTCCCGCGACCCCGATCATGATCGCCATTGGCGGCCTTGTCGGCG
CTGGAATTGTTGAGCCGCTCCCCGTGATCATCGGCGCCGTCATCGGTGCGGTGGCCGGTGACATTATTTCCTATCTTCTT
GGCTGGTGGCTGGGCCGCAACATCATTCATAAATGGCCGCTCAACAAGTATCGCAGCGCCGTGGCACGTGCGCGCCTCCT
CTTTCGCCGCTATGGTTTTACCGCGGTTTTTTTGGGCCGGTTCTTCGGGCCGGTGCGCTGTACCGTGCCGATGGTGGCTG
GCATGATGTCCATGGACCAGACCCGATTCCAGACGGCAAACGTGCTTTCGGCACTCGTATGGGCCCCGCTCATGTTCCTT
CCGGGCTGGCTGGTAGGGCGCGGGGCAGGGATATTCGCCAAAATGGATGGCGATCATATGCGCTGGTTTATCATCGCTAT
CGCCATTGCCACTGTCATCGTAACGGTTATTGGCGTGCGCTTTTTCAGGGCGCGCCCGCGCCACGAGCGCAAGCGCGGGG
TGCAGGTATCGCCGGGGGAGTAA

Upstream 100 bases:

>100_bases
TATTTGAGCAGGGCGCTTCACGCACCGGATAGGCTTTGCGGAAAATACAGAGGCGGCTTTGATCGTTTCAGAAATCCGGT
TTGCGGTATTTGAGGATGGA

Downstream 100 bases:

>100_bases
TCAGCCACTTGTCTTGCGGGTTTGCGTCTGCATAATGAGGCAAACCATAGTTTCCCATGGCAATGGGCGATTCATTGGCA
GTATATGCCCCGGTGAACGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MESIIGDLGQFISDHRAWAGPIVGAIAFGESLAIIGMFIPATPIMIAIGGLVGAGIVEPLPVIIGAVIGAVAGDIISYLL
GWWLGRNIIHKWPLNKYRSAVARARLLFRRYGFTAVFLGRFFGPVRCTVPMVAGMMSMDQTRFQTANVLSALVWAPLMFL
PGWLVGRGAGIFAKMDGDHMRWFIIAIAIATVIVTVIGVRFFRARPRHERKRGVQVSPGE

Sequences:

>Translated_220_residues
MESIIGDLGQFISDHRAWAGPIVGAIAFGESLAIIGMFIPATPIMIAIGGLVGAGIVEPLPVIIGAVIGAVAGDIISYLL
GWWLGRNIIHKWPLNKYRSAVARARLLFRRYGFTAVFLGRFFGPVRCTVPMVAGMMSMDQTRFQTANVLSALVWAPLMFL
PGWLVGRGAGIFAKMDGDHMRWFIIAIAIATVIVTVIGVRFFRARPRHERKRGVQVSPGE
>Mature_220_residues
MESIIGDLGQFISDHRAWAGPIVGAIAFGESLAIIGMFIPATPIMIAIGGLVGAGIVEPLPVIIGAVIGAVAGDIISYLL
GWWLGRNIIHKWPLNKYRSAVARARLLFRRYGFTAVFLGRFFGPVRCTVPMVAGMMSMDQTRFQTANVLSALVWAPLMFL
PGWLVGRGAGIFAKMDGDHMRWFIIAIAIATVIVTVIGVRFFRARPRHERKRGVQVSPGE

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI1786252, Length=212, Percent_Identity=32.0754716981132, Blast_Score=114, Evalue=4e-27,
Organism=Escherichia coli, GI1789481, Length=156, Percent_Identity=28.2051282051282, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1789384, Length=163, Percent_Identity=31.2883435582822, Blast_Score=68, Evalue=4e-13,
Organism=Escherichia coli, GI1788656, Length=196, Percent_Identity=24.4897959183673, Blast_Score=68, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 23973; Mature: 23973

Theoretical pI: Translated: 11.71; Mature: 11.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESIIGDLGQFISDHRAWAGPIVGAIAFGESLAIIGMFIPATPIMIAIGGLVGAGIVEPL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PVIIGAVIGAVAGDIISYLLGWWLGRNIIHKWPLNKYRSAVARARLLFRRYGFTAVFLGR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCHHHHHHHH
FFGPVRCTVPMVAGMMSMDQTRFQTANVLSALVWAPLMFLPGWLVGRGAGIFAKMDGDHM
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCEEEEECCCHH
RWFIIAIAIATVIVTVIGVRFFRARPRHERKRGVQVSPGE
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCC
>Mature Secondary Structure
MESIIGDLGQFISDHRAWAGPIVGAIAFGESLAIIGMFIPATPIMIAIGGLVGAGIVEPL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PVIIGAVIGAVAGDIISYLLGWWLGRNIIHKWPLNKYRSAVARARLLFRRYGFTAVFLGR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCHHHHHHHH
FFGPVRCTVPMVAGMMSMDQTRFQTANVLSALVWAPLMFLPGWLVGRGAGIFAKMDGDHM
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCEEEEECCCHH
RWFIIAIAIATVIVTVIGVRFFRARPRHERKRGVQVSPGE
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1630901; 9278503 [H]