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The map label for this gene is ropB [H]

Identifier: 225852776

GI number: 225852776

Start: 1264805

End: 1265443

Strand: Direct

Name: ropB [H]

Synonym: BMEA_A1331

Alternate gene names: 225852776

Gene position: 1264805-1265443 (Clockwise)

Preceding gene: 225852775

Following gene: 225852778

Centisome position: 59.5

GC content: 58.22

Gene sequence:

>639_bases
ATGTTCAAGCGTTCTATCACCGCAGCCGCGCTCGGCGCTGCCGTCATGGCCTTTGCAGGCTCGGCTTTCGCAGCCGACAT
GATGGGAGGGACCGACTACACCTATAACGACCCTGTCGCCGCCGGTCCGCATGACTGGTCCGGCAATTATGTCGGCGCGC
AGGTTGGTGGTTCGTCTTCCAAATTCCCAAGCCCGTTTGCCAGCCGTACCGGCGCCCTCGGCGGCATTGTCGTCGGCAAG
AACATGCAGAACGGCAATATCGTTTTCGGCGCGGAGCTGGAAGGCAACTTCGCCGAAGCCGAACATCGCATCGGCCATGG
CGGCACGCTACAGCAATCTTGGAATGGCAATGCCAAGGGCAAGGTCGGCTATACCTTCGACAAGACCCTCGTTTACGGCA
CCGCCGGTTATGGCGTGACCCGCTTCAAGGCTAAGGACAACACCACTTCCGCTTCCGGCTGCGAAGGCGGCGTACTGATT
GGTGCAGGTGTGGAACAGGCCTTGAGCGGCCCTCTCTCCGTCAAGGCCGAATATGACTTCCAGCGTTTCAACGATGTCAA
ATCGCAAGTGAATGGCATCGAACAGCGTAACAACCTGAAGAACCATTCGATCAAGGCCGGCCTGAACTACAAATTCTAG

Upstream 100 bases:

>100_bases
TGAGACGAAGGCCCGCTCGAAAGCGCCGCTTTCCGCCCGAAAAAATTGAGTTCAAGCATGTTTCCCGCCGGTGTTTTGGC
CGGGAAAACCGGAGTACAAA

Downstream 100 bases:

>100_bases
TGGTCTGATTCCAACATTTGCCTCCCTCGGTTCAAGCGTTGAGCAAATGTTGGAATCACAAAGACCACTAGTAAGTATAT
GTATCTAGTGGATTTTTAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MFKRSITAAALGAAVMAFAGSAFAADMMGGTDYTYNDPVAAGPHDWSGNYVGAQVGGSSSKFPSPFASRTGALGGIVVGK
NMQNGNIVFGAELEGNFAEAEHRIGHGGTLQQSWNGNAKGKVGYTFDKTLVYGTAGYGVTRFKAKDNTTSASGCEGGVLI
GAGVEQALSGPLSVKAEYDFQRFNDVKSQVNGIEQRNNLKNHSIKAGLNYKF

Sequences:

>Translated_212_residues
MFKRSITAAALGAAVMAFAGSAFAADMMGGTDYTYNDPVAAGPHDWSGNYVGAQVGGSSSKFPSPFASRTGALGGIVVGK
NMQNGNIVFGAELEGNFAEAEHRIGHGGTLQQSWNGNAKGKVGYTFDKTLVYGTAGYGVTRFKAKDNTTSASGCEGGVLI
GAGVEQALSGPLSVKAEYDFQRFNDVKSQVNGIEQRNNLKNHSIKAGLNYKF
>Mature_212_residues
MFKRSITAAALGAAVMAFAGSAFAADMMGGTDYTYNDPVAAGPHDWSGNYVGAQVGGSSSKFPSPFASRTGALGGIVVGK
NMQNGNIVFGAELEGNFAEAEHRIGHGGTLQQSWNGNAKGKVGYTFDKTLVYGTAGYGVTRFKAKDNTTSASGCEGGVLI
GAGVEQALSGPLSVKAEYDFQRFNDVKSQVNGIEQRNNLKNHSIKAGLNYKF

Specific function: Unknown

COG id: COG3637

COG function: function code M; Opacity protein and related surface antigens

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the omp25/ropB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011250
- InterPro:   IPR000498 [H]

Pfam domain/function: PF01389 OmpA_membrane [H]

EC number: NA

Molecular weight: Translated: 22109; Mature: 22109

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKRSITAAALGAAVMAFAGSAFAADMMGGTDYTYNDPVAAGPHDWSGNYVGAQVGGSSS
CCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCC
KFPSPFASRTGALGGIVVGKNMQNGNIVFGAELEGNFAEAEHRIGHGGTLQQSWNGNAKG
CCCCCHHHHCCCCCEEEEECCCCCCCEEEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCC
KVGYTFDKTLVYGTAGYGVTRFKAKDNTTSASGCEGGVLIGAGVEQALSGPLSVKAEYDF
EEEEEECCEEEEECCCCCEEEEECCCCCCCCCCCCCCEEEECCHHHHHCCCEEEEECCCH
QRFNDVKSQVNGIEQRNNLKNHSIKAGLNYKF
HHHHHHHHHHHHHHHHCCCCCCEEECCCCCCC
>Mature Secondary Structure
MFKRSITAAALGAAVMAFAGSAFAADMMGGTDYTYNDPVAAGPHDWSGNYVGAQVGGSSS
CCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCC
KFPSPFASRTGALGGIVVGKNMQNGNIVFGAELEGNFAEAEHRIGHGGTLQQSWNGNAKG
CCCCCHHHHCCCCCEEEEECCCCCCCEEEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCC
KVGYTFDKTLVYGTAGYGVTRFKAKDNTTSASGCEGGVLIGAGVEQALSGPLSVKAEYDF
EEEEEECCEEEEECCCCCEEEEECCCCCCCCCCCCCCEEEECCHHHHHCCCEEEEECCCH
QRFNDVKSQVNGIEQRNNLKNHSIKAGLNYKF
HHHHHHHHHHHHHHHHCCCCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8589412 [H]