Click here to switch to the map view.

The map label for this gene is cinA [H]

Identifier: 225852622

GI number: 225852622

Start: 1118706

End: 1119203

Strand: Direct

Name: cinA [H]

Synonym: BMEA_A1166

Alternate gene names: 225852622

Gene position: 1118706-1119203 (Clockwise)

Preceding gene: 225852621

Following gene: 225852638

Centisome position: 52.63

GC content: 59.44

Gene sequence:

>498_bases
ATGAGCCACATCATCGCCGGACAGAAAGCCATCGCCGTGCTTGATGCCTGCCGCAAGGCAGGCATCATGATCGCAACGGC
GGAATCCTGCACCGGCGGACTGATCGCAGCCGCACTGACCGATATTCCCGGCTCCTCCGATGTGGTGGATCGCGGCTTCG
TCACCTATTCCAACGAAGCCAAGAACGAGATGCTCGCCATACCGATGGAACTTATCGCGCATCTGGGCGCCGTCTCGAAA
GAAGTAGCAATTGCCATGGCGGAAGGTGCGCTCGTGCATTCGCGTGCAGGCGTCAGCATCGCCGTTACCGGCATTGCCGG
TCCGGGCGGAGGATCCGCGGAAAAGCCCGTGGGCCTCGTTCACATCGCATCTGCCCGAACGGGACAGGCAACACTTCATC
GTGAGTGCCGCTTCGGTGAAAAAACCAGAACCGAAATTCGTCATGCGACAGTGCTTGCGGCACTTGATTTGGTCCTTGAC
GCGCTGCATCGCGCATAA

Upstream 100 bases:

>100_bases
TCAAGGCTACGACGAACGAAAAGCTTGGCTTTGTCGGCCGTCGCGAAGGCATTGCAGCCATCGCAACCGCAACCGTCATC
TACCCCGGAGAAGTACCGGA

Downstream 100 bases:

>100_bases
ACATTCGGGTGAGTATACCTTTTCCCGCAATCGTCCTATCTTTCTCCTGAAATAACATGAGAAGGAGCTTTACGCGATGC
GGTTCAAGGACAAGGTGGTC

Product: CinA domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 164

Protein sequence:

>165_residues
MSHIIAGQKAIAVLDACRKAGIMIATAESCTGGLIAAALTDIPGSSDVVDRGFVTYSNEAKNEMLAIPMELIAHLGAVSK
EVAIAMAEGALVHSRAGVSIAVTGIAGPGGGSAEKPVGLVHIASARTGQATLHRECRFGEKTRTEIRHATVLAALDLVLD
ALHRA

Sequences:

>Translated_165_residues
MSHIIAGQKAIAVLDACRKAGIMIATAESCTGGLIAAALTDIPGSSDVVDRGFVTYSNEAKNEMLAIPMELIAHLGAVSK
EVAIAMAEGALVHSRAGVSIAVTGIAGPGGGSAEKPVGLVHIASARTGQATLHRECRFGEKTRTEIRHATVLAALDLVLD
ALHRA
>Mature_164_residues
SHIIAGQKAIAVLDACRKAGIMIATAESCTGGLIAAALTDIPGSSDVVDRGFVTYSNEAKNEMLAIPMELIAHLGAVSKE
VAIAMAEGALVHSRAGVSIAVTGIAGPGGGSAEKPVGLVHIASARTGQATLHRECRFGEKTRTEIRHATVLAALDLVLDA
LHRA

Specific function: Unknown

COG id: COG1546

COG function: function code R; Uncharacterized protein (competence- and mitomycin-induced)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CinA family [H]

Homologues:

Organism=Escherichia coli, GI1789052, Length=152, Percent_Identity=46.7105263157895, Blast_Score=124, Evalue=3e-30,
Organism=Escherichia coli, GI1787818, Length=108, Percent_Identity=40.7407407407407, Blast_Score=80, Evalue=7e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008136
- InterPro:   IPR008135
- InterPro:   IPR020817
- InterPro:   IPR001453 [H]

Pfam domain/function: PF02464 CinA; PF00994 MoCF_biosynth [H]

EC number: NA

Molecular weight: Translated: 16872; Mature: 16741

Theoretical pI: Translated: 7.20; Mature: 7.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHIIAGQKAIAVLDACRKAGIMIATAESCTGGLIAAALTDIPGSSDVVDRGFVTYSNEA
CCCCCCCHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCEEECCCC
KNEMLAIPMELIAHLGAVSKEVAIAMAEGALVHSRAGVSIAVTGIAGPGGGSAEKPVGLV
CCCEEECHHHHHHHHCHHHHHHHHHHHCCCEEECCCCCEEEEEEECCCCCCCCCCCEEEE
HIASARTGQATLHRECRFGEKTRTEIRHATVLAALDLVLDALHRA
EEECCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SHIIAGQKAIAVLDACRKAGIMIATAESCTGGLIAAALTDIPGSSDVVDRGFVTYSNEA
CCCCCCHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCEEECCCC
KNEMLAIPMELIAHLGAVSKEVAIAMAEGALVHSRAGVSIAVTGIAGPGGGSAEKPVGLV
CCCEEECHHHHHHHHCHHHHHHHHHHHCCCEEECCCCCEEEEEEECCCCCCCCCCCEEEE
HIASARTGQATLHRECRFGEKTRTEIRHATVLAALDLVLDALHRA
EEECCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA