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The map label for this gene is rssA [H]

Identifier: 225852578

GI number: 225852578

Start: 1065660

End: 1066607

Strand: Direct

Name: rssA [H]

Synonym: BMEA_A1118

Alternate gene names: 225852578

Gene position: 1065660-1066607 (Clockwise)

Preceding gene: 225852577

Following gene: 225852579

Centisome position: 50.13

GC content: 59.28

Gene sequence:

>948_bases
GTGGTGCTTGCATGGAGCCAGAAGCGCAGGGCAATTCACCAGGACGGCGAACCGTCGGCCGATGGTGTCGCTGATCCGGC
TGAAATCACGCATGAACCCCAAAAAATAGCATTGGCCCTCGGTGGTGGTGCCGCGCGGGGCTGGGCGCATATTGGCGTTC
TGCTTGCCCTTGACGAAGCGGGCATCGAAATCGAGATGATTGCAGGCACGTCCATCGGTGCACTTGTCGGCGGCTGCTAT
CTGGCGGGAAAACTCAACGAACTGGAAGAATTTGCCCGCAGCCTCACCCGGCGGCGCATGTTCAACCTTCTCGACATTAC
GTTTCGCGGCAGCGGCCTTTTTGGCGGCATGAAGCTTGATGGCCGCCTGCGTGAACACCTCGACGGCATACGCATAGAAG
ACCTGCCCAAGCCTTTCGTTGCCGTTTGCACTGAACTGCGTACAGGCCATGAAATCTGGCTTTCCACAGGCCCGCTGGTA
GAAGCCATGCGCGCGTCCTATGCCCTGCCCGGCGTCTTTGAGCCTGTGCGCTGGGGCGACCGTGTGCTGGTGGACGGCGC
ACTGGTCAATCCCGTGCCGGTTTCTGTCTGCCGCGCCTATGAACAGCGCCTCGTTCTGGCGGCAAACCTGCACTACGACC
AATATGGCCGCGCTGCCGTCATCAAGCAGGCAAAGATGCGACAGGAATCAGTGCCGCAGGCAATGCATGGCGAAAAGGAA
ACGCGCCTCGGCATTACCGGTGTGATGATGGAAGCCTTCAACATCATTCAGGACCGGATTTCCCGCGCCCGTATGGCTGG
TGACCCGCCGGATGTTTCGCTGATGCCGACGGTCGGGCAGATCGGCCTTGCAGACTTTCATCGTGCGGCAGAAGCAATTG
ATGCCGGTTACACGGAAACAGTCAAACGGATCGAAGATATCAAACGTCTGCAAGGCGTGATGGGGTGA

Upstream 100 bases:

>100_bases
TGTATAAAGACATGCACAAAAACTGAATTTTAAAACGCGCCGTATGCATATGATGAAATGCGACGCGCTTTAAGCTGTAC
GAAACGAAGAGGTGTCCAAC

Downstream 100 bases:

>100_bases
CTCGGCCCGGTAGCAGGCTGCGCGGAATCGGGATTCGCTATTTTTCAGCAACCCGTTTGCCGGCCACCTTCTTATGAGGG
TCAGACTTGCTTTTTGACGA

Product: patatin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 315; Mature: 315

Protein sequence:

>315_residues
MVLAWSQKRRAIHQDGEPSADGVADPAEITHEPQKIALALGGGAARGWAHIGVLLALDEAGIEIEMIAGTSIGALVGGCY
LAGKLNELEEFARSLTRRRMFNLLDITFRGSGLFGGMKLDGRLREHLDGIRIEDLPKPFVAVCTELRTGHEIWLSTGPLV
EAMRASYALPGVFEPVRWGDRVLVDGALVNPVPVSVCRAYEQRLVLAANLHYDQYGRAAVIKQAKMRQESVPQAMHGEKE
TRLGITGVMMEAFNIIQDRISRARMAGDPPDVSLMPTVGQIGLADFHRAAEAIDAGYTETVKRIEDIKRLQGVMG

Sequences:

>Translated_315_residues
MVLAWSQKRRAIHQDGEPSADGVADPAEITHEPQKIALALGGGAARGWAHIGVLLALDEAGIEIEMIAGTSIGALVGGCY
LAGKLNELEEFARSLTRRRMFNLLDITFRGSGLFGGMKLDGRLREHLDGIRIEDLPKPFVAVCTELRTGHEIWLSTGPLV
EAMRASYALPGVFEPVRWGDRVLVDGALVNPVPVSVCRAYEQRLVLAANLHYDQYGRAAVIKQAKMRQESVPQAMHGEKE
TRLGITGVMMEAFNIIQDRISRARMAGDPPDVSLMPTVGQIGLADFHRAAEAIDAGYTETVKRIEDIKRLQGVMG
>Mature_315_residues
MVLAWSQKRRAIHQDGEPSADGVADPAEITHEPQKIALALGGGAARGWAHIGVLLALDEAGIEIEMIAGTSIGALVGGCY
LAGKLNELEEFARSLTRRRMFNLLDITFRGSGLFGGMKLDGRLREHLDGIRIEDLPKPFVAVCTELRTGHEIWLSTGPLV
EAMRASYALPGVFEPVRWGDRVLVDGALVNPVPVSVCRAYEQRLVLAANLHYDQYGRAAVIKQAKMRQESVPQAMHGEKE
TRLGITGVMMEAFNIIQDRISRARMAGDPPDVSLMPTVGQIGLADFHRAAEAIDAGYTETVKRIEDIKRLQGVMG

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Homo sapiens, GI260656037, Length=182, Percent_Identity=32.4175824175824, Blast_Score=93, Evalue=4e-19,
Organism=Homo sapiens, GI260656041, Length=182, Percent_Identity=32.4175824175824, Blast_Score=93, Evalue=4e-19,
Organism=Homo sapiens, GI116256487, Length=182, Percent_Identity=32.4175824175824, Blast_Score=93, Evalue=4e-19,
Organism=Homo sapiens, GI260656043, Length=182, Percent_Identity=32.4175824175824, Blast_Score=92, Evalue=4e-19,
Organism=Homo sapiens, GI260656039, Length=182, Percent_Identity=32.4175824175824, Blast_Score=92, Evalue=4e-19,
Organism=Homo sapiens, GI148727290, Length=186, Percent_Identity=32.7956989247312, Blast_Score=90, Evalue=3e-18,
Organism=Homo sapiens, GI148727335, Length=186, Percent_Identity=32.7956989247312, Blast_Score=90, Evalue=3e-18,
Organism=Escherichia coli, GI226510936, Length=289, Percent_Identity=37.3702422145329, Blast_Score=199, Evalue=1e-52,
Organism=Caenorhabditis elegans, GI71997299, Length=168, Percent_Identity=32.1428571428571, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI71997289, Length=168, Percent_Identity=32.1428571428571, Blast_Score=74, Evalue=1e-13,
Organism=Saccharomyces cerevisiae, GI6323581, Length=183, Percent_Identity=32.2404371584699, Blast_Score=84, Evalue=3e-17,
Organism=Drosophila melanogaster, GI281376913, Length=170, Percent_Identity=34.1176470588235, Blast_Score=82, Evalue=6e-16,
Organism=Drosophila melanogaster, GI28571388, Length=170, Percent_Identity=32.3529411764706, Blast_Score=77, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR001423
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 34343; Mature: 34343

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLAWSQKRRAIHQDGEPSADGVADPAEITHEPQKIALALGGGAARGWAHIGVLLALDEA
CEECCCHHHHHHCCCCCCCCCCCCCCHHHCCCCCCEEEEECCCCCCHHHHHEEEEEEECC
GIEIEMIAGTSIGALVGGCYLAGKLNELEEFARSLTRRRMFNLLDITFRGSGLFGGMKLD
CCEEEEEECCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCEEC
GRLREHLDGIRIEDLPKPFVAVCTELRTGHEIWLSTGPLVEAMRASYALPGVFEPVRWGD
HHHHHHHCCCCCCCCCCHHHHHHHHHCCCCEEEECCCHHHHHHHHHCCCCCCCCCCCCCC
RVLVDGALVNPVPVSVCRAYEQRLVLAANLHYDQYGRAAVIKQAKMRQESVPQAMHGEKE
EEEECCCCCCCCHHHHHHHHHHHEEEEEECCHHHCCHHHHHHHHHHHHHHCCHHHCCCCH
TRLGITGVMMEAFNIIQDRISRARMAGDPPDVSLMPTVGQIGLADFHRAAEAIDAGYTET
HHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHHHCCHHHH
VKRIEDIKRLQGVMG
HHHHHHHHHHHHCCC
>Mature Secondary Structure
MVLAWSQKRRAIHQDGEPSADGVADPAEITHEPQKIALALGGGAARGWAHIGVLLALDEA
CEECCCHHHHHHCCCCCCCCCCCCCCHHHCCCCCCEEEEECCCCCCHHHHHEEEEEEECC
GIEIEMIAGTSIGALVGGCYLAGKLNELEEFARSLTRRRMFNLLDITFRGSGLFGGMKLD
CCEEEEEECCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCEEC
GRLREHLDGIRIEDLPKPFVAVCTELRTGHEIWLSTGPLVEAMRASYALPGVFEPVRWGD
HHHHHHHCCCCCCCCCCHHHHHHHHHCCCCEEEECCCHHHHHHHHHCCCCCCCCCCCCCC
RVLVDGALVNPVPVSVCRAYEQRLVLAANLHYDQYGRAAVIKQAKMRQESVPQAMHGEKE
EEEECCCCCCCCHHHHHHHHHHHEEEEEECCHHHCCHHHHHHHHHHHHHHCCHHHCCCCH
TRLGITGVMMEAFNIIQDRISRARMAGDPPDVSLMPTVGQIGLADFHRAAEAIDAGYTET
HHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHHHCCHHHH
VKRIEDIKRLQGVMG
HHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8282700; 9097039; 8905232; 9278503 [H]