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The map label for this gene is yfgC [C]

Identifier: 225852422

GI number: 225852422

Start: 901961

End: 903376

Strand: Reverse

Name: yfgC [C]

Synonym: BMEA_A0949

Alternate gene names: 225852422

Gene position: 903376-901961 (Counterclockwise)

Preceding gene: 225852424

Following gene: 225852421

Centisome position: 42.5

GC content: 58.47

Gene sequence:

>1416_bases
ATGGGAACGACGACTGCACCTTTCCCTGCAAAAACGCTTTCTTTTCTTAACCTTATACGCCGTTTTGTGGCCGCTTCCGG
AGCCATCGCCATTGCCGTGACAGGCGCTTTTCCTGCCTCGGCTCAAGCGCGCGGGGGCGGTGTGCCCATTATCCGCGATG
CCGAAATCGAGGCGCTCGTTGCCGATTATGCCGCACCTATCCTGAAGGTCGCAGGCCTTGGCAAGCGCGGGGTGCGGGTC
ATTCTGGTGAACTCGCCAAGCTTCAACGCCTTTGTCGATGGCCGCCGCATTTTCGTTAATACGGGCGCCATCATGCAAGC
CGAAACGCCAAATGAGATCATCGGCGTCATTGCACATGAATCGGGCCATCTCGCCGGAGGGCATCAGGACAGGCTGCGCG
AACAGTTAAGCCGTGCGCGCACCATGGCGATCATCGGAATGCTTCTGGGGGTCGGGGCTGGTGTTGCGGGTGCAGCCGGC
GGCAGCGGCAACGCGGCTGGTGCAGGTGCGGGCATTGCACTTGGCAGCAATGAAATGGCAATGCGCAGCCTGCTCAATTA
TCAGCGCACCGAAGAAATGACCGCCGACCGTCTTGCGGTCAATTATCTCAATGCCACGGGCCAATCGACCAAGGGCATGC
TGGAAACATTCCAGCGTTTTGCGTCCGCGCTGTCACTTTCGGGGACGCAGATCGATCAGTACAGGATCAGCCACCCGCTT
CCGCGCGAACGTATCGCCAATCTGGAAGAACTTGCGAAGAAGAGCCCCTATTACAACAAGACCGATTCCCCCGCCTTCCA
GCTTCGCCACGACATGGCTCGCGCAAAGATCGCGGCCTATTCCGGCAATATGGGCGCGCTCCAGCGCATGTTCCGCAACA
ATCCGGGCGGATTGGCCGCGCGCTACGGCAGTGCCATCACGACCTATCTGAACGGATCGGCGCGCGCAGCCCTGCCGAAA
TTCGACGCCCTTATCAAAGAACAGCCGAAGAACCCCTATTTCCAGGAAATGCGGGGAGAAGTTCTGATCAAGGCCAATGA
TGCGGCAGGCGCAGCAAAAGCCTTCCAGAAGGCGGTTTCGCTTGATCCGCACAAATCGCCGCTTCTGCGCATGAGCTACG
GTCGCGCGCTGATGCTGACAGGCACGAAGGCGAACATGCCTGCCGCCATCAGGGAGATCAAGGCGGGAATCGCCTCGGAT
CCTGAATTCCCGGATGGCTATAGCTATCTTGCACAAGCTTATGGCCAGCAGGGCGACATGGCCCGTGCAGACCTTGCGAC
AGCCGATATGAACTATTATGCGGGTAAGTTACAACAGGCCCAGATATTCGCAATCCGTGCGCAAAAACAGATGAAGCCGG
GAACTCCCGACTGGCTTCGCGCGCAGGACATCATCAACGCAAAGAAGTCCAAGTAG

Upstream 100 bases:

>100_bases
CGACCTCACCTGGAGAAGCGTATCCGCGACACCGGCCTATCGGTGATTGAATGCACAGGCTATAAGATTCGTCACCGTTT
CAAGAAGGACAACGCGAAAT

Downstream 100 bases:

>100_bases
GATCGGCACAGCCCATCACGACCTTGAGACAGAATTAGGATTTTCGGATGAAAAATGCGGCTTCCATTACGATAGCGAGC
GGTATTATCGGCTTGGTTGC

Product: peptidase M48 Ste24p

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 471; Mature: 470

Protein sequence:

>471_residues
MGTTTAPFPAKTLSFLNLIRRFVAASGAIAIAVTGAFPASAQARGGGVPIIRDAEIEALVADYAAPILKVAGLGKRGVRV
ILVNSPSFNAFVDGRRIFVNTGAIMQAETPNEIIGVIAHESGHLAGGHQDRLREQLSRARTMAIIGMLLGVGAGVAGAAG
GSGNAAGAGAGIALGSNEMAMRSLLNYQRTEEMTADRLAVNYLNATGQSTKGMLETFQRFASALSLSGTQIDQYRISHPL
PRERIANLEELAKKSPYYNKTDSPAFQLRHDMARAKIAAYSGNMGALQRMFRNNPGGLAARYGSAITTYLNGSARAALPK
FDALIKEQPKNPYFQEMRGEVLIKANDAAGAAKAFQKAVSLDPHKSPLLRMSYGRALMLTGTKANMPAAIREIKAGIASD
PEFPDGYSYLAQAYGQQGDMARADLATADMNYYAGKLQQAQIFAIRAQKQMKPGTPDWLRAQDIINAKKSK

Sequences:

>Translated_471_residues
MGTTTAPFPAKTLSFLNLIRRFVAASGAIAIAVTGAFPASAQARGGGVPIIRDAEIEALVADYAAPILKVAGLGKRGVRV
ILVNSPSFNAFVDGRRIFVNTGAIMQAETPNEIIGVIAHESGHLAGGHQDRLREQLSRARTMAIIGMLLGVGAGVAGAAG
GSGNAAGAGAGIALGSNEMAMRSLLNYQRTEEMTADRLAVNYLNATGQSTKGMLETFQRFASALSLSGTQIDQYRISHPL
PRERIANLEELAKKSPYYNKTDSPAFQLRHDMARAKIAAYSGNMGALQRMFRNNPGGLAARYGSAITTYLNGSARAALPK
FDALIKEQPKNPYFQEMRGEVLIKANDAAGAAKAFQKAVSLDPHKSPLLRMSYGRALMLTGTKANMPAAIREIKAGIASD
PEFPDGYSYLAQAYGQQGDMARADLATADMNYYAGKLQQAQIFAIRAQKQMKPGTPDWLRAQDIINAKKSK
>Mature_470_residues
GTTTAPFPAKTLSFLNLIRRFVAASGAIAIAVTGAFPASAQARGGGVPIIRDAEIEALVADYAAPILKVAGLGKRGVRVI
LVNSPSFNAFVDGRRIFVNTGAIMQAETPNEIIGVIAHESGHLAGGHQDRLREQLSRARTMAIIGMLLGVGAGVAGAAGG
SGNAAGAGAGIALGSNEMAMRSLLNYQRTEEMTADRLAVNYLNATGQSTKGMLETFQRFASALSLSGTQIDQYRISHPLP
RERIANLEELAKKSPYYNKTDSPAFQLRHDMARAKIAAYSGNMGALQRMFRNNPGGLAARYGSAITTYLNGSARAALPKF
DALIKEQPKNPYFQEMRGEVLIKANDAAGAAKAFQKAVSLDPHKSPLLRMSYGRALMLTGTKANMPAAIREIKAGIASDP
EFPDGYSYLAQAYGQQGDMARADLATADMNYYAGKLQQAQIFAIRAQKQMKPGTPDWLRAQDIINAKKSK

Specific function: Unknown

COG id: COG4783

COG function: function code R; Putative Zn-dependent protease, contains TPR repeats

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 4 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI1788840, Length=422, Percent_Identity=21.563981042654, Blast_Score=64, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915
- InterPro:   IPR013026
- InterPro:   IPR011990 [H]

Pfam domain/function: PF01435 Peptidase_M48 [H]

EC number: NA

Molecular weight: Translated: 50197; Mature: 50066

Theoretical pI: Translated: 10.43; Mature: 10.43

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTTTAPFPAKTLSFLNLIRRFVAASGAIAIAVTGAFPASAQARGGGVPIIRDAEIEALV
CCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCEEECCHHHHHH
ADYAAPILKVAGLGKRGVRVILVNSPSFNAFVDGRRIFVNTGAIMQAETPNEIIGVIAHE
HHHHHHHHHHHCCCCCCEEEEEEECCCCCEEECCCEEEEECCEEEECCCCCCEEEEEEEC
SGHLAGGHQDRLREQLSRARTMAIIGMLLGVGAGVAGAAGGSGNAAGAGAGIALGSNEMA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCHHH
MRSLLNYQRTEEMTADRLAVNYLNATGQSTKGMLETFQRFASALSLSGTQIDQYRISHPL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEHHHHCCCCC
PRERIANLEELAKKSPYYNKTDSPAFQLRHDMARAKIAAYSGNMGALQRMFRNNPGGLAA
CHHHHCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHH
RYGSAITTYLNGSARAALPKFDALIKEQPKNPYFQEMRGEVLIKANDAAGAAKAFQKAVS
HHCCEEEEEECCCCCCCCHHHHHHHHCCCCCCHHHHCCCCEEEEECCCCHHHHHHHHHHC
LDPHKSPLLRMSYGRALMLTGTKANMPAAIREIKAGIASDPEFPDGYSYLAQAYGQQGDM
CCCCCCCCEEEECCCEEEEECCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCC
ARADLATADMNYYAGKLQQAQIFAIRAQKQMKPGTPDWLRAQDIINAKKSK
HHHHHHHHHHHHHHCCCCHHHEEEEEHHHHCCCCCCHHHHHHHHHHCCCCC
>Mature Secondary Structure 
GTTTAPFPAKTLSFLNLIRRFVAASGAIAIAVTGAFPASAQARGGGVPIIRDAEIEALV
CCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCEEECCHHHHHH
ADYAAPILKVAGLGKRGVRVILVNSPSFNAFVDGRRIFVNTGAIMQAETPNEIIGVIAHE
HHHHHHHHHHHCCCCCCEEEEEEECCCCCEEECCCEEEEECCEEEECCCCCCEEEEEEEC
SGHLAGGHQDRLREQLSRARTMAIIGMLLGVGAGVAGAAGGSGNAAGAGAGIALGSNEMA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCHHH
MRSLLNYQRTEEMTADRLAVNYLNATGQSTKGMLETFQRFASALSLSGTQIDQYRISHPL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEHHHHCCCCC
PRERIANLEELAKKSPYYNKTDSPAFQLRHDMARAKIAAYSGNMGALQRMFRNNPGGLAA
CHHHHCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHH
RYGSAITTYLNGSARAALPKFDALIKEQPKNPYFQEMRGEVLIKANDAAGAAKAFQKAVS
HHCCEEEEEECCCCCCCCHHHHHHHHCCCCCCHHHHCCCCEEEEECCCCHHHHHHHHHHC
LDPHKSPLLRMSYGRALMLTGTKANMPAAIREIKAGIASDPEFPDGYSYLAQAYGQQGDM
CCCCCCCCEEEECCCEEEEECCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCC
ARADLATADMNYYAGKLQQAQIFAIRAQKQMKPGTPDWLRAQDIINAKKSK
HHHHHHHHHHHHHHCCCCHHHEEEEEHHHHCCCCCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]