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The map label for this gene is 225852406

Identifier: 225852406

GI number: 225852406

Start: 887980

End: 888813

Strand: Direct

Name: 225852406

Synonym: BMEA_A0932

Alternate gene names: NA

Gene position: 887980-888813 (Clockwise)

Preceding gene: 225852405

Following gene: 225852409

Centisome position: 41.77

GC content: 58.27

Gene sequence:

>834_bases
ATGAACCAGAATGAAACCCATTGTCTGGCGCTTTTGCGCGAAGCAGACCGGGATCGCTATCTTTCGGTGCTCTACGCCCC
GCAGGAAAAGCGCGGCGCATTGGCTGCACTATATGCGTTCAACGCCGAGATTGCGCGCATCCGCGATCTCGTCCACGAAC
CGCTTCCGGGCGAAGTGCGGTTGCAATGGTGGCGTGATCTCATCAATGGCGAGGCAAGAGGCAGTGCTGAAGCGCATCCA
GTTGCCGCGGCCTTGATCGAGACGATCGAAAAATACGAGCTTCCCCGCATTGCCTTCGACAATTATTGCGAAGCGCGCGT
GTTCGATCTTTATGACGATCCCATGCCGAGCCGTAACGACTTGGAAGGCTATTGCGGTGAAACGGCATCGGCTTTGATCC
AGCTGGCCGGTTTCATACTGGATCGCGATGCCGCGCAGGCCCATGCTGAAACCGCTGGCCATGCCGGCGTTGCGCAGGCG
GTGGCGGGTTTACTGCGGCTCTTGCCAATCCACCGGCGACGCGGGCAGGTTTATGTTCCGGCGGACATGCTCAAAGCCAT
CGGTGTAACCCGCGATATGCTTCTCTCCAGCGAAGACAAATCCGCCACCGAGCGTGCCGTCACCATCATGCTGGCGCTGG
CGCGGGAGCATCTGGCAATTTTCGACAAGGCCAAAGCCGGGTTGCCTCAAACGCTTCATCCGGCCTTTTTGCCGATGGCG
CTTGTTCCGGCCTATCTGAACGCGGTTGAACGTCTGGGTGCGCAGGCAGCGCAGAAGGTTGCCGATATTTCTGCCATCCG
TAAACAATGGCTGATGTTCCGCGCAAACTTTTGA

Upstream 100 bases:

>100_bases
CCGACCCTATGAGCACCGGCGCCGCCGTGCGCACCTATAATGTGCTTCTGGCGGAAGATCGCGCGGTTGCGGCAGTGCTG
ATTGCTGTAGATTGAAAATC

Downstream 100 bases:

>100_bases
AACCGCGCATCATGAAGCGGCTCCGGCAAAGGCGCCGAAGCCCCATTTTCTTCAGTACAAGCTGAGCCAGTTTCGGCAAT
CGGCAAGGGCGCGTGCGGAA

Product: phytoene synthase

Products: diphosphate; prephytoene diphosphate

Alternate protein names: Phytoene Synthase; Phytoene Synthase Protein; Squalene Synthase HpnD; Squalene; Squalene And Phytoene Synthases Superfamily; Phytoene/Squalene Synthetase; Phytoene/Squalene Synthetase-Like Protein; Terpenoid Synthase

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MNQNETHCLALLREADRDRYLSVLYAPQEKRGALAALYAFNAEIARIRDLVHEPLPGEVRLQWWRDLINGEARGSAEAHP
VAAALIETIEKYELPRIAFDNYCEARVFDLYDDPMPSRNDLEGYCGETASALIQLAGFILDRDAAQAHAETAGHAGVAQA
VAGLLRLLPIHRRRGQVYVPADMLKAIGVTRDMLLSSEDKSATERAVTIMLALAREHLAIFDKAKAGLPQTLHPAFLPMA
LVPAYLNAVERLGAQAAQKVADISAIRKQWLMFRANF

Sequences:

>Translated_277_residues
MNQNETHCLALLREADRDRYLSVLYAPQEKRGALAALYAFNAEIARIRDLVHEPLPGEVRLQWWRDLINGEARGSAEAHP
VAAALIETIEKYELPRIAFDNYCEARVFDLYDDPMPSRNDLEGYCGETASALIQLAGFILDRDAAQAHAETAGHAGVAQA
VAGLLRLLPIHRRRGQVYVPADMLKAIGVTRDMLLSSEDKSATERAVTIMLALAREHLAIFDKAKAGLPQTLHPAFLPMA
LVPAYLNAVERLGAQAAQKVADISAIRKQWLMFRANF
>Mature_277_residues
MNQNETHCLALLREADRDRYLSVLYAPQEKRGALAALYAFNAEIARIRDLVHEPLPGEVRLQWWRDLINGEARGSAEAHP
VAAALIETIEKYELPRIAFDNYCEARVFDLYDDPMPSRNDLEGYCGETASALIQLAGFILDRDAAQAHAETAGHAGVAQA
VAGLLRLLPIHRRRGQVYVPADMLKAIGVTRDMLLSSEDKSATERAVTIMLALAREHLAIFDKAKAGLPQTLHPAFLPMA
LVPAYLNAVERLGAQAAQKVADISAIRKQWLMFRANF

Specific function: Unknown

COG id: COG1562

COG function: function code I; Phytoene/squalene synthetase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI124517691, Length=251, Percent_Identity=29.8804780876494, Blast_Score=107, Evalue=9e-24,
Organism=Drosophila melanogaster, GI24641447, Length=259, Percent_Identity=28.957528957529, Blast_Score=85, Evalue=6e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.5.1.32

Molecular weight: Translated: 30694; Mature: 30694

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQNETHCLALLREADRDRYLSVLYAPQEKRGALAALYAFNAEIARIRDLVHEPLPGEVR
CCCCHHHHHHHHHHHCHHHEEHEEECCCHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHH
LQWWRDLINGEARGSAEAHPVAAALIETIEKYELPRIAFDNYCEARVFDLYDDPMPSRND
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHCCCCCCEEEECCCCCCCCCCC
LEGYCGETASALIQLAGFILDRDAAQAHAETAGHAGVAQAVAGLLRLLPIHRRRGQVYVP
CCHHCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEEC
ADMLKAIGVTRDMLLSSEDKSATERAVTIMLALAREHLAIFDKAKAGLPQTLHPAFLPMA
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
LVPAYLNAVERLGAQAAQKVADISAIRKQWLMFRANF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNQNETHCLALLREADRDRYLSVLYAPQEKRGALAALYAFNAEIARIRDLVHEPLPGEVR
CCCCHHHHHHHHHHHCHHHEEHEEECCCHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHH
LQWWRDLINGEARGSAEAHPVAAALIETIEKYELPRIAFDNYCEARVFDLYDDPMPSRND
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHCCCCCCEEEECCCCCCCCCCC
LEGYCGETASALIQLAGFILDRDAAQAHAETAGHAGVAQAVAGLLRLLPIHRRRGQVYVP
CCHHCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEEC
ADMLKAIGVTRDMLLSSEDKSATERAVTIMLALAREHLAIFDKAKAGLPQTLHPAFLPMA
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
LVPAYLNAVERLGAQAAQKVADISAIRKQWLMFRANF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: geranylgeranyl diphosphate

Specific reaction: 2 geranylgeranyl diphosphate = diphosphate + prephytoene diphosphate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA