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The map label for this gene is omp25 [H]

Identifier: 225852222

GI number: 225852222

Start: 708245

End: 708886

Strand: Direct

Name: omp25 [H]

Synonym: BMEA_A0738

Alternate gene names: 225852222

Gene position: 708245-708886 (Clockwise)

Preceding gene: 225852221

Following gene: 225852227

Centisome position: 33.32

GC content: 57.94

Gene sequence:

>642_bases
ATGCGCACTCTTAAGTCTCTCGTAATCGTCTCGGCTGCGTTGCTGCCGTTCTCTGCGACCGCTTTTGCTGCCGACGCCAT
CCAGGAACAGCCTCCGGTTCCGGCTCCGGTTGAAGTAGCTCCCCAGTATAGCTGGGCTGGTGGCTATACCGGTCTTTACC
TTGGCTACGGCTGGAACAAGGCCAAGACCAGCACCGTTGGCAGCATCAAGCCTGACGATTGGAAGGCTGGCGCCTTTGCT
GGCTGGAACTTCCAGCAGGACCAGATCGTATACGGCGTTGAAGGTGATGCAGGTTATTCCTGGGCCAAGAAGTCCAAGGA
CGGCCTGGAAGTCAAGCAGGGCTTTGAAGGCTCGCTGCGTGCCCGCGTTGGCTACGACCTGAACCCGGTTATGCCGTACC
TCACGGCTGGTATTGCCGGTTCGCAGATCAAGCTTAACAACGGCTTGGACGACGAAAGCAAGTTCCGCGTGGGTTGGACG
GCTGGTGCCGGTCTCGAAGCCAAGCTGACGGACAACATCCTCGGCCGCGTTGAGTACCGTTACACCCAGTACGGCAACAA
GAACTATGATCTGGCCGGTACGACTGTTCGCAACAAGCTGGACACGCAGGATTTCCGCGTCGGCATCGGCTACAAGTTCT
AA

Upstream 100 bases:

>100_bases
CGATATGTCACCCCTGTCAGCGCGGCATGGGCGGTTCACTCCCGATGCTGCCCGCCCGATAAGGGACCGCGCAAAACGTA
ATTTGTGTAAGGAGAATGCC

Downstream 100 bases:

>100_bases
TTATAGCATAATTGGACACGGAAAACCGGACAGGCAACTGTCCGGTTTTTTGTTGTCTGCAAAGGATTTCAGGCATCCGG
TAATGCGCAGCCTCGATCAG

Product: OmpA-like transmembrane domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MRTLKSLVIVSAALLPFSATAFAADAIQEQPPVPAPVEVAPQYSWAGGYTGLYLGYGWNKAKTSTVGSIKPDDWKAGAFA
GWNFQQDQIVYGVEGDAGYSWAKKSKDGLEVKQGFEGSLRARVGYDLNPVMPYLTAGIAGSQIKLNNGLDDESKFRVGWT
AGAGLEAKLTDNILGRVEYRYTQYGNKNYDLAGTTVRNKLDTQDFRVGIGYKF

Sequences:

>Translated_213_residues
MRTLKSLVIVSAALLPFSATAFAADAIQEQPPVPAPVEVAPQYSWAGGYTGLYLGYGWNKAKTSTVGSIKPDDWKAGAFA
GWNFQQDQIVYGVEGDAGYSWAKKSKDGLEVKQGFEGSLRARVGYDLNPVMPYLTAGIAGSQIKLNNGLDDESKFRVGWT
AGAGLEAKLTDNILGRVEYRYTQYGNKNYDLAGTTVRNKLDTQDFRVGIGYKF
>Mature_213_residues
MRTLKSLVIVSAALLPFSATAFAADAIQEQPPVPAPVEVAPQYSWAGGYTGLYLGYGWNKAKTSTVGSIKPDDWKAGAFA
GWNFQQDQIVYGVEGDAGYSWAKKSKDGLEVKQGFEGSLRARVGYDLNPVMPYLTAGIAGSQIKLNNGLDDESKFRVGWT
AGAGLEAKLTDNILGRVEYRYTQYGNKNYDLAGTTVRNKLDTQDFRVGIGYKF

Specific function: Unknown

COG id: COG3637

COG function: function code M; Opacity protein and related surface antigens

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the omp25/ropB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011250
- InterPro:   IPR000498 [H]

Pfam domain/function: PF01389 OmpA_membrane [H]

EC number: NA

Molecular weight: Translated: 23185; Mature: 23185

Theoretical pI: Translated: 9.03; Mature: 9.03

Prosite motif: PS00695 ENT_VIR_OMP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTLKSLVIVSAALLPFSATAFAADAIQEQPPVPAPVEVAPQYSWAGGYTGLYLGYGWNK
CCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCEEEEECCCCC
AKTSTVGSIKPDDWKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGLEVKQGFEGSLR
CCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEECCCCCCCHHHCCCCCCHHHCCCCCCEE
ARVGYDLNPVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLEAKLTDNILGRVEYR
EEECCCCCCHHHHHHCCCCCCEEEECCCCCCCCCEEEEEECCCCCEEEHHHHHHCEEEEE
YTQYGNKNYDLAGTTVRNKLDTQDFRVGIGYKF
EEECCCCCCCCCCCHHHCCCCCCCEEEECCCCC
>Mature Secondary Structure
MRTLKSLVIVSAALLPFSATAFAADAIQEQPPVPAPVEVAPQYSWAGGYTGLYLGYGWNK
CCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCEEEEECCCCC
AKTSTVGSIKPDDWKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGLEVKQGFEGSLR
CCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEECCCCCCCHHHCCCCCCHHHCCCCCCEE
ARVGYDLNPVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLEAKLTDNILGRVEYR
EEECCCCCCHHHHHHCCCCCCEEEECCCCCCCCCEEEEEECCCCCEEEHHHHHHCEEEEE
YTQYGNKNYDLAGTTVRNKLDTQDFRVGIGYKF
EEECCCCCCCCCCCHHHCCCCCCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7896724 [H]