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The map label for this gene is rbsC [H]

Identifier: 225852075

GI number: 225852075

Start: 557233

End: 558234

Strand: Direct

Name: rbsC [H]

Synonym: BMEA_A0580

Alternate gene names: 225852075

Gene position: 557233-558234 (Clockwise)

Preceding gene: 225852073

Following gene: 225852076

Centisome position: 26.21

GC content: 57.19

Gene sequence:

>1002_bases
ATGACAGAGGTTGCGACGGATAAGGGCAGGGCGGCGAAGACATCCAGGGATTGGGATCTGAGGGCGGTTGCACCCTTTGT
TGCGTTGCTGCTGCTGCTTATTCTAGGCACGATCGCCAATCCGAATTTTATCAGCATCGACAATCTGCTGAATGTTGCAA
CGCGCAGCGCCTTCATTGCCATCATTGCACTTGGCGCTACCTATGTAATCTCATCGGGCGGGCTGGACTTGTCGGTGGGA
GCGATGGTGGCTTTCGTTGCCAGCATCATGATCTTGTTCATGAATAGCGGAATGATTGCCGATCCGGTGCTTATGCTCAT
CGCAGCCGTCATGCTGGCGCTTGTCGTCGGCGCGGCTTGCGGCCTACTGAACGGTATCATAACGACCGTGGGGGGCATAG
AACCCTTCATTGCCACGCTGGGCACCATGGGCATTTATCGCGGCCTTACCACATGGTTGTCGCAGGGCGGCGCGATCACG
TTGCGCAACCCGGAAATCCAGTCGCTTTATCGCCCAGCCTATTTCGGCTCGGTGCTGGGCGTGCCGGTGCCGGTAATCGT
TATTTTTGTGACGGCGGCGCTCGCGGCATTTGTGCTCTATCGTACACGCTATGGCCGCCATATCATCGCTGTCGGCTCGA
ATGAGGACGTGGCGCGCTATTCCGGCATTTCGGTGAAGAAGGTGCGCACCATCGCCTTTGTCATCCAGGGGCTCTGCGTC
GCTGTGGCTGTGCTTCTTTATGTGCCGCGCCTGGGCTCTACCTCGGCCACGACCGGCCTGATGTGGGAACTGCAGGCGAT
TACTGCCGTTGTTGTCGGCGGCACAGCTTTACGTGGCGGCGTGGGGCGCATCTGGGGTACGATCTGCGGCGCCTTCATTC
TGGAAATTATCGGCAATATCATGCTGCTGTCGAGCTTTGTCAGCGAATATCTGCTCGGTGCAATTCAGGGCGCAATCATA
ATTATCGCTATGCTGGTGCAGCGTTCGCTGTCCAGAAGATAG

Upstream 100 bases:

>100_bases
GGGAGGTGAGCGGCGCAGGCATGACGGAACATGAAATTGTGGCGCTCGCCACCGGCGTTGGCGCCAACGAGGCTGCATGA
AAGGGAGGCGGGCGAGGGAG

Downstream 100 bases:

>100_bases
GTCTATGGACTGGCGGAATTGTTGGGGCGATTCCAGCCAGAGAGGAATGAGAGCCCCGCGTTTACTGGGAGGAAGACCAT
GCGAAGGAATTTGATGAAGC

Product: monosaccharide-transporting ATPase

Products: ADP; phosphate; ribose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 333; Mature: 332

Protein sequence:

>333_residues
MTEVATDKGRAAKTSRDWDLRAVAPFVALLLLLILGTIANPNFISIDNLLNVATRSAFIAIIALGATYVISSGGLDLSVG
AMVAFVASIMILFMNSGMIADPVLMLIAAVMLALVVGAACGLLNGIITTVGGIEPFIATLGTMGIYRGLTTWLSQGGAIT
LRNPEIQSLYRPAYFGSVLGVPVPVIVIFVTAALAAFVLYRTRYGRHIIAVGSNEDVARYSGISVKKVRTIAFVIQGLCV
AVAVLLYVPRLGSTSATTGLMWELQAITAVVVGGTALRGGVGRIWGTICGAFILEIIGNIMLLSSFVSEYLLGAIQGAII
IIAMLVQRSLSRR

Sequences:

>Translated_333_residues
MTEVATDKGRAAKTSRDWDLRAVAPFVALLLLLILGTIANPNFISIDNLLNVATRSAFIAIIALGATYVISSGGLDLSVG
AMVAFVASIMILFMNSGMIADPVLMLIAAVMLALVVGAACGLLNGIITTVGGIEPFIATLGTMGIYRGLTTWLSQGGAIT
LRNPEIQSLYRPAYFGSVLGVPVPVIVIFVTAALAAFVLYRTRYGRHIIAVGSNEDVARYSGISVKKVRTIAFVIQGLCV
AVAVLLYVPRLGSTSATTGLMWELQAITAVVVGGTALRGGVGRIWGTICGAFILEIIGNIMLLSSFVSEYLLGAIQGAII
IIAMLVQRSLSRR
>Mature_332_residues
TEVATDKGRAAKTSRDWDLRAVAPFVALLLLLILGTIANPNFISIDNLLNVATRSAFIAIIALGATYVISSGGLDLSVGA
MVAFVASIMILFMNSGMIADPVLMLIAAVMLALVVGAACGLLNGIITTVGGIEPFIATLGTMGIYRGLTTWLSQGGAITL
RNPEIQSLYRPAYFGSVLGVPVPVIVIFVTAALAAFVLYRTRYGRHIIAVGSNEDVARYSGISVKKVRTIAFVIQGLCVA
VAVLLYVPRLGSTSATTGLMWELQAITAVVVGGTALRGGVGRIWGTICGAFILEIIGNIMLLSSFVSEYLLGAIQGAIII
IAMLVQRSLSRR

Specific function: Part of the binding-protein-dependent transport system for ribose. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1172

COG function: function code G; Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790191, Length=315, Percent_Identity=36.8253968253968, Blast_Score=154, Evalue=9e-39,
Organism=Escherichia coli, GI1790524, Length=315, Percent_Identity=32.3809523809524, Blast_Score=144, Evalue=1e-35,
Organism=Escherichia coli, GI1788896, Length=326, Percent_Identity=32.5153374233129, Blast_Score=139, Evalue=2e-34,
Organism=Escherichia coli, GI145693152, Length=336, Percent_Identity=28.5714285714286, Blast_Score=119, Evalue=4e-28,
Organism=Escherichia coli, GI145693214, Length=263, Percent_Identity=33.8403041825095, Blast_Score=110, Evalue=2e-25,
Organism=Escherichia coli, GI87082395, Length=297, Percent_Identity=30.6397306397306, Blast_Score=103, Evalue=2e-23,
Organism=Escherichia coli, GI1789992, Length=137, Percent_Identity=40.8759124087591, Blast_Score=96, Evalue=4e-21,
Organism=Escherichia coli, GI1787793, Length=302, Percent_Identity=28.476821192053, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI1787794, Length=301, Percent_Identity=30.2325581395349, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI1788471, Length=253, Percent_Identity=32.4110671936759, Blast_Score=85, Evalue=8e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 34964; Mature: 34833

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEVATDKGRAAKTSRDWDLRAVAPFVALLLLLILGTIANPNFISIDNLLNVATRSAFIA
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHH
IIALGATYVISSGGLDLSVGAMVAFVASIMILFMNSGMIADPVLMLIAAVMLALVVGAAC
HHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
GLLNGIITTVGGIEPFIATLGTMGIYRGLTTWLSQGGAITLRNPEIQSLYRPAYFGSVLG
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHC
VPVPVIVIFVTAALAAFVLYRTRYGRHIIAVGSNEDVARYSGISVKKVRTIAFVIQGLCV
CHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHCCCCHHHHHHHHHHHHHHHH
AVAVLLYVPRLGSTSATTGLMWELQAITAVVVGGTALRGGVGRIWGTICGAFILEIIGNI
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHH
MLLSSFVSEYLLGAIQGAIIIIAMLVQRSLSRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TEVATDKGRAAKTSRDWDLRAVAPFVALLLLLILGTIANPNFISIDNLLNVATRSAFIA
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHH
IIALGATYVISSGGLDLSVGAMVAFVASIMILFMNSGMIADPVLMLIAAVMLALVVGAAC
HHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
GLLNGIITTVGGIEPFIATLGTMGIYRGLTTWLSQGGAITLRNPEIQSLYRPAYFGSVLG
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHC
VPVPVIVIFVTAALAAFVLYRTRYGRHIIAVGSNEDVARYSGISVKKVRTIAFVIQGLCV
CHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHCCCCHHHHHHHHHHHHHHHH
AVAVLLYVPRLGSTSATTGLMWELQAITAVVVGGTALRGGVGRIWGTICGAFILEIIGNI
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHH
MLLSSFVSEYLLGAIQGAIIIIAMLVQRSLSRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; ribose [Periplasm]; H2O [C]

Specific reaction: ATP + ribose [Periplasm] + H2O = ADP + phosphate + ribose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7921236; 9353933; 9384377 [H]