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The map label for this gene is hspH [H]

Identifier: 225851696

GI number: 225851696

Start: 178521

End: 178943

Strand: Reverse

Name: hspH [H]

Synonym: BMEA_A0169

Alternate gene names: 225851696

Gene position: 178943-178521 (Counterclockwise)

Preceding gene: 225851697

Following gene: 225851695

Centisome position: 8.42

GC content: 56.26

Gene sequence:

>423_bases
ATGACACGAATGACACCGTTTTCGAGCCCGTTACTGCTCGGATTCGACACGATGGAAAAGACGCTGGAACGGATCGCAAA
ATCTGGTGACGGTTATCCGCCCTATAATATAGAGCGTTTGCGCGGCGATACGGGTTCTGAACGCCTGCGCATCACCTTGG
CGGTTGCGGGCTTTGCCAGCGAGAATCTCGAAGTCATGACGGAGGACAACCAGCTTGTCATCCGCGGGCGCCAGACAGAC
GATACCGAACGTGAATATCTGCATCGCGGCATCGCCGCCCGCCAATTCCAACGGGTGTTCGTTCTGGCCGATGGCATGAG
AGTTCTGGCTTGTGAACTCAGGAATGGTCTTCTTGCCATCGATCTGGACCGGCCCGAGCCGGAACGGCTGATCAAACGGA
TCGACATAGCGGTCAAGGACTGA

Upstream 100 bases:

>100_bases
GCACCCTTGAAGTCCGGCTTTTCACAAGCCATATCAGTCTTTGAGAAGATATGCCGAAAGGGTCCTTCTCAAGACGGTCG
CTTGGATAAGGACTGATGAA

Downstream 100 bases:

>100_bases
TCTGCATTCAGTCCATGTTCACAAGAAGACTGCTATATTGGGACAATGAAGCTCTGAATGCGCCATGGTCGCAAATGACA
TGCCGCTTGAATGGAGGCTA

Product: small heat shock protein hspD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 139

Protein sequence:

>140_residues
MTRMTPFSSPLLLGFDTMEKTLERIAKSGDGYPPYNIERLRGDTGSERLRITLAVAGFASENLEVMTEDNQLVIRGRQTD
DTEREYLHRGIAARQFQRVFVLADGMRVLACELRNGLLAIDLDRPEPERLIKRIDIAVKD

Sequences:

>Translated_140_residues
MTRMTPFSSPLLLGFDTMEKTLERIAKSGDGYPPYNIERLRGDTGSERLRITLAVAGFASENLEVMTEDNQLVIRGRQTD
DTEREYLHRGIAARQFQRVFVLADGMRVLACELRNGLLAIDLDRPEPERLIKRIDIAVKD
>Mature_139_residues
TRMTPFSSPLLLGFDTMEKTLERIAKSGDGYPPYNIERLRGDTGSERLRITLAVAGFASENLEVMTEDNQLVIRGRQTDD
TEREYLHRGIAARQFQRVFVLADGMRVLACELRNGLLAIDLDRPEPERLIKRIDIAVKD

Specific function: Unknown

COG id: COG0071

COG function: function code O; Molecular chaperone (small heat shock protein)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the small heat shock protein (HSP20) family [H]

Homologues:

Organism=Escherichia coli, GI1790122, Length=134, Percent_Identity=44.7761194029851, Blast_Score=99, Evalue=8e-23,
Organism=Escherichia coli, GI87082316, Length=134, Percent_Identity=38.8059701492537, Blast_Score=87, Evalue=4e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002068
- InterPro:   IPR008978 [H]

Pfam domain/function: PF00011 HSP20 [H]

EC number: NA

Molecular weight: Translated: 15938; Mature: 15806

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: PS01031 HSP20

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRMTPFSSPLLLGFDTMEKTLERIAKSGDGYPPYNIERLRGDTGSERLRITLAVAGFAS
CCCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCEEEEEEEEECCCC
ENLEVMTEDNQLVIRGRQTDDTEREYLHRGIAARQFQRVFVLADGMRVLACELRNGLLAI
CCCEEEECCCEEEEECCCCCCHHHHHHHHHHHHHHHHEEEEEECCHHEEEEECCCCEEEE
DLDRPEPERLIKRIDIAVKD
ECCCCCHHHHHHHHHHEECC
>Mature Secondary Structure 
TRMTPFSSPLLLGFDTMEKTLERIAKSGDGYPPYNIERLRGDTGSERLRITLAVAGFAS
CCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCEEEEEEEEECCCC
ENLEVMTEDNQLVIRGRQTDDTEREYLHRGIAARQFQRVFVLADGMRVLACELRNGLLAI
CCCEEEECCCEEEEECCCCCCHHHHHHHHHHHHHHHHEEEEEECCHHEEEEECCCCEEEE
DLDRPEPERLIKRIDIAVKD
ECCCCCHHHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12597275 [H]