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The map label for this gene is yqfA [H]

Identifier: 225851610

GI number: 225851610

Start: 72067

End: 72723

Strand: Direct

Name: yqfA [H]

Synonym: BMEA_A0071

Alternate gene names: 225851610

Gene position: 72067-72723 (Clockwise)

Preceding gene: 225851609

Following gene: 225851614

Centisome position: 3.39

GC content: 57.69

Gene sequence:

>657_bases
ATGAATGTAAGACTGCCACATCCAGTCAAATGGAAATATGACCGGGCCGAATTGTGGGCCGATGGCGTCATCCATGTGCT
GGGTGTCGGGCTGGCGCTTGCCGGTGCCATTGCCATGCTGTTCTATTTCCTGCCGAACATGCCGGCTGTGACTTCGATTT
CATCCGGTGTCTATCTGGCGAGCCTCGTTGCCGCGCTCGGAATTTCCGCCGTTTACAATATCTGGCCGGTCTCCCCGACC
AAATGGTTCCTGCGCCGTTTCGACCATTCGGCGATTTATTTGCTGATTGCCGGAACCTACACGCCTTTTGCCATACATAT
GGGCGACCGCGCGCTGCCCCTGCTGCTGTTCGTGTGGAGCGTGGCTTTCGTCGGCATCATGCTCAAACTGTTCATGCCGG
GGCGTTTTGACCGGCTGTCGATCCTGCTTTATCTGGCGCTCGGCTGGAGCGGCGTCATGGTCTATGACACCATGGTGCAA
TCGCTGCCACCCGCCGTCTTCTGGCTGATTGCGGCTGGCGGCATGGTCTATTCGCTGGGCGTCATCTTCCATGTCTGGGA
ACGCCTGCGGTTTCAGAACGCCATCTGGCACGGTTTTGTCGTGGTGGGCGCGGCGCTGCATTATTGCGCGGTGTTTTTTG
TCGGCGCGTGGAATTAA

Upstream 100 bases:

>100_bases
ACGGTTTTCGGAAAAGATGCGCGTTAAAACAAAGGACCAGAGCGCCGATCTGATCCAATCAGATCGAAACGCGCTCTGGA
ACTGACGACAGGGAAATTTC

Downstream 100 bases:

>100_bases
CGAAAAGGGCGGCGTCGCGGATTCAGTTTATGACGTGCCGAAAATGGTGTTTTGCGAGAACCGGAGCGGAGTGTACTTTA
AGGTACATGAGCACCGGAAG

Product: hemolysin-3

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MNVRLPHPVKWKYDRAELWADGVIHVLGVGLALAGAIAMLFYFLPNMPAVTSISSGVYLASLVAALGISAVYNIWPVSPT
KWFLRRFDHSAIYLLIAGTYTPFAIHMGDRALPLLLFVWSVAFVGIMLKLFMPGRFDRLSILLYLALGWSGVMVYDTMVQ
SLPPAVFWLIAAGGMVYSLGVIFHVWERLRFQNAIWHGFVVVGAALHYCAVFFVGAWN

Sequences:

>Translated_218_residues
MNVRLPHPVKWKYDRAELWADGVIHVLGVGLALAGAIAMLFYFLPNMPAVTSISSGVYLASLVAALGISAVYNIWPVSPT
KWFLRRFDHSAIYLLIAGTYTPFAIHMGDRALPLLLFVWSVAFVGIMLKLFMPGRFDRLSILLYLALGWSGVMVYDTMVQ
SLPPAVFWLIAAGGMVYSLGVIFHVWERLRFQNAIWHGFVVVGAALHYCAVFFVGAWN
>Mature_218_residues
MNVRLPHPVKWKYDRAELWADGVIHVLGVGLALAGAIAMLFYFLPNMPAVTSISSGVYLASLVAALGISAVYNIWPVSPT
KWFLRRFDHSAIYLLIAGTYTPFAIHMGDRALPLLLFVWSVAFVGIMLKLFMPGRFDRLSILLYLALGWSGVMVYDTMVQ
SLPPAVFWLIAAGGMVYSLGVIFHVWERLRFQNAIWHGFVVVGAALHYCAVFFVGAWN

Specific function: Unknown

COG id: COG1272

COG function: function code R; Predicted membrane protein, hemolysin III homolog

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0073 (Hly-III) family [H]

Homologues:

Organism=Homo sapiens, GI154759275, Length=220, Percent_Identity=29.0909090909091, Blast_Score=69, Evalue=4e-12,
Organism=Escherichia coli, GI1789266, Length=208, Percent_Identity=39.4230769230769, Blast_Score=139, Evalue=2e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004254
- InterPro:   IPR005744 [H]

Pfam domain/function: PF03006 HlyIII [H]

EC number: NA

Molecular weight: Translated: 24311; Mature: 24311

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVRLPHPVKWKYDRAELWADGVIHVLGVGLALAGAIAMLFYFLPNMPAVTSISSGVYLA
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHH
SLVAALGISAVYNIWPVSPTKWFLRRFDHSAIYLLIAGTYTPFAIHMGDRALPLLLFVWS
HHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEEEEEECCCCCEEEECCCCHHHHHHHHHH
VAFVGIMLKLFMPGRFDRLSILLYLALGWSGVMVYDTMVQSLPPAVFWLIAAGGMVYSLG
HHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHCHHHHHHH
VIFHVWERLRFQNAIWHGFVVVGAALHYCAVFFVGAWN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNVRLPHPVKWKYDRAELWADGVIHVLGVGLALAGAIAMLFYFLPNMPAVTSISSGVYLA
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHH
SLVAALGISAVYNIWPVSPTKWFLRRFDHSAIYLLIAGTYTPFAIHMGDRALPLLLFVWS
HHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEEEEEECCCCCEEEECCCCHHHHHHHHHH
VAFVGIMLKLFMPGRFDRLSILLYLALGWSGVMVYDTMVQSLPPAVFWLIAAGGMVYSLG
HHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHCHHHHHHH
VIFHVWERLRFQNAIWHGFVVVGAALHYCAVFFVGAWN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]