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The map label for this gene is ygbK [H]

Identifier: 225686829

GI number: 225686829

Start: 1037291

End: 1038547

Strand: Reverse

Name: ygbK [H]

Synonym: BMEA_B1066

Alternate gene names: 225686829

Gene position: 1038547-1037291 (Counterclockwise)

Preceding gene: 225686830

Following gene: 225686828

Centisome position: 87.6

GC content: 58.79

Gene sequence:

>1257_bases
ATGGACAGATCAGGCAGGATAGGGATCATTGCCGACGACATGACGGGCGCCCTGATGGTTGCGGCTTATTATGAAACAGC
TGGCATTCGCGCCATGGTGGTCACTGAGATTGATGCGATCAGGGACTGTGCCGATGAAACGATCATCATTTGGGCCGGAC
GAACACGGTTGATCGATCCTGTTGAAGCGTGTCGGCAGGCCGACCGCGCCGCCGCCGCTTTCGATGCCGTCGGATGTGAC
CAGGTTATCTACAAGGTCTGCGCCAGTTTCGACTCGACCGAACAGGGGAATATCGGGCCGATCGCCGACATATTGAATGT
GCGCTACAAGCCCGAAAACCTTCTGTTCTGCCCCGGCTTTCCGAAGTTCAACGCGACCGTCCATCAGGGGTATCTTTTCT
ATCGCAGCCGTCTGGTTTCGGAATCGGTCAAGCGCTACGATCCCGCGACCCCGATGAGCGACCCCGACATGGTGCGGTTT
ATCGGAAAGCAGACGCAGCAACCTATCGGCTTGCCCCATTCCGTTCTGCTACAGGGGGCAGAGGCCGCCCAGGCACATCT
CGATACCCTGGCGAAACAGGGAATCCGCTATTGCATCGTCGACGCAAGCGACAATGGGGATGTGGAAATTGCAGCACGAC
TGGCCGCGCGCCAGCCCACATTTGTCAGTTCGGATGCCACCCTTATCCAGCTCGGGCTTGATCGTTTTGCCTCCAATCCT
CCCGCCACGGTCGGTGCGCCTCCCCCAACCGGCGGCACGGCGGCGGTCCTCGTCGGCACGGTTGGCCCCATCGCAGATGC
GCAAATTGCGGAATTTGCGCGCCATTATCCCGTGCTGACACTTGATCTCCTGTCCGATGGCAGTGTGGAAGATATGGTAG
AGAGAGCGATGGCCTGGGCCGAGCCATATCACAGCCACCAGCCCTACCTGATCTCGACGGCGGTAAACGATGCACGGGTG
AAGGAAATCCAGTCCGAACTCGGCATACGCGGCGCCGGCGAAAAGGCTGAATTGTTGATGTCGGAACTCGCCGCCGCCAT
TGTTGCACGAGAGGTAGACCGTCTCATCGTGGTCGGCGGCGAGACATCGGGTGGCGTCATCACCCGCCTTGGTTTGAGAC
GGTTGCGCGCCCATCCAGATAACGGCATCAGCACCGGCTTTTGCTATAGCGAAGGGAGCGAACGCACCGCCTTCTTCTTC
AAATCCGGCAAAGTCGGAACCGAGACTGTTCTCCTTGATGCGCTATCAGTCTTGTAG

Upstream 100 bases:

>100_bases
CGCTGAACCTCACATCGACGCGCGGCAATATCATCATTCAGTTTATCAGCCATATCGATAACAAGCGGTCATCGGCGCAG
ATGCGACCCCAGAGGAACCA

Downstream 100 bases:

>100_bases
ACACTGGCTACAAATCAGCGCTTCGTTCCAATGCTACCATGGTAGGCTACCGATCTCCGACGCCACGCGCGGCCGCGTCG
ACGCGACCCACCGCGAAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 418; Mature: 418

Protein sequence:

>418_residues
MDRSGRIGIIADDMTGALMVAAYYETAGIRAMVVTEIDAIRDCADETIIIWAGRTRLIDPVEACRQADRAAAAFDAVGCD
QVIYKVCASFDSTEQGNIGPIADILNVRYKPENLLFCPGFPKFNATVHQGYLFYRSRLVSESVKRYDPATPMSDPDMVRF
IGKQTQQPIGLPHSVLLQGAEAAQAHLDTLAKQGIRYCIVDASDNGDVEIAARLAARQPTFVSSDATLIQLGLDRFASNP
PATVGAPPPTGGTAAVLVGTVGPIADAQIAEFARHYPVLTLDLLSDGSVEDMVERAMAWAEPYHSHQPYLISTAVNDARV
KEIQSELGIRGAGEKAELLMSELAAAIVAREVDRLIVVGGETSGGVITRLGLRRLRAHPDNGISTGFCYSEGSERTAFFF
KSGKVGTETVLLDALSVL

Sequences:

>Translated_418_residues
MDRSGRIGIIADDMTGALMVAAYYETAGIRAMVVTEIDAIRDCADETIIIWAGRTRLIDPVEACRQADRAAAAFDAVGCD
QVIYKVCASFDSTEQGNIGPIADILNVRYKPENLLFCPGFPKFNATVHQGYLFYRSRLVSESVKRYDPATPMSDPDMVRF
IGKQTQQPIGLPHSVLLQGAEAAQAHLDTLAKQGIRYCIVDASDNGDVEIAARLAARQPTFVSSDATLIQLGLDRFASNP
PATVGAPPPTGGTAAVLVGTVGPIADAQIAEFARHYPVLTLDLLSDGSVEDMVERAMAWAEPYHSHQPYLISTAVNDARV
KEIQSELGIRGAGEKAELLMSELAAAIVAREVDRLIVVGGETSGGVITRLGLRRLRAHPDNGISTGFCYSEGSERTAFFF
KSGKVGTETVLLDALSVL
>Mature_418_residues
MDRSGRIGIIADDMTGALMVAAYYETAGIRAMVVTEIDAIRDCADETIIIWAGRTRLIDPVEACRQADRAAAAFDAVGCD
QVIYKVCASFDSTEQGNIGPIADILNVRYKPENLLFCPGFPKFNATVHQGYLFYRSRLVSESVKRYDPATPMSDPDMVRF
IGKQTQQPIGLPHSVLLQGAEAAQAHLDTLAKQGIRYCIVDASDNGDVEIAARLAARQPTFVSSDATLIQLGLDRFASNP
PATVGAPPPTGGTAAVLVGTVGPIADAQIAEFARHYPVLTLDLLSDGSVEDMVERAMAWAEPYHSHQPYLISTAVNDARV
KEIQSELGIRGAGEKAELLMSELAAAIVAREVDRLIVVGGETSGGVITRLGLRRLRAHPDNGISTGFCYSEGSERTAFFF
KSGKVGTETVLLDALSVL

Specific function: Unknown

COG id: COG3395

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1011 [H]

Homologues:

Organism=Escherichia coli, GI1789093, Length=379, Percent_Identity=30.8707124010554, Blast_Score=172, Evalue=4e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010737 [H]

Pfam domain/function: PF07005 DUF1537 [H]

EC number: NA

Molecular weight: Translated: 44861; Mature: 44861

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRSGRIGIIADDMTGALMVAAYYETAGIRAMVVTEIDAIRDCADETIIIWAGRTRLIDP
CCCCCCEEEEECCCCCHHHHEEHHHHCCCEEEEEHHHHHHHHCCCCEEEEEECCCCCCCH
VEACRQADRAAAAFDAVGCDQVIYKVCASFDSTEQGNIGPIADILNVRYKPENLLFCPGF
HHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHCEECCCCEEECCCC
PKFNATVHQGYLFYRSRLVSESVKRYDPATPMSDPDMVRFIGKQTQQPIGLPHSVLLQGA
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHCCH
EAAQAHLDTLAKQGIRYCIVDASDNGDVEIAARLAARQPTFVSSDATLIQLGLDRFASNP
HHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEEHHHCCCCEECCCCHHEEHHHHHHCCCC
PATVGAPPPTGGTAAVLVGTVGPIADAQIAEFARHYPVLTLDLLSDGSVEDMVERAMAWA
CCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHH
EPYHSHQPYLISTAVNDARVKEIQSELGIRGAGEKAELLMSELAAAIVAREVDRLIVVGG
CCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECC
ETSGGVITRLGLRRLRAHPDNGISTGFCYSEGSERTAFFFKSGKVGTETVLLDALSVL
CCCCCHHHHHHHHHHHCCCCCCCCCCEEECCCCCCEEEEEECCCCCHHHHHHHHHHHC
>Mature Secondary Structure
MDRSGRIGIIADDMTGALMVAAYYETAGIRAMVVTEIDAIRDCADETIIIWAGRTRLIDP
CCCCCCEEEEECCCCCHHHHEEHHHHCCCEEEEEHHHHHHHHCCCCEEEEEECCCCCCCH
VEACRQADRAAAAFDAVGCDQVIYKVCASFDSTEQGNIGPIADILNVRYKPENLLFCPGF
HHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHCEECCCCEEECCCC
PKFNATVHQGYLFYRSRLVSESVKRYDPATPMSDPDMVRFIGKQTQQPIGLPHSVLLQGA
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHCCH
EAAQAHLDTLAKQGIRYCIVDASDNGDVEIAARLAARQPTFVSSDATLIQLGLDRFASNP
HHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEEHHHCCCCEECCCCHHEEHHHHHHCCCC
PATVGAPPPTGGTAAVLVGTVGPIADAQIAEFARHYPVLTLDLLSDGSVEDMVERAMAWA
CCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHH
EPYHSHQPYLISTAVNDARVKEIQSELGIRGAGEKAELLMSELAAAIVAREVDRLIVVGG
CCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECC
ETSGGVITRLGLRRLRAHPDNGISTGFCYSEGSERTAFFFKSGKVGTETVLLDALSVL
CCCCCHHHHHHHHHHHCCCCCCCCCCEEECCCCCCEEEEEECCCCCHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]