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The map label for this gene is dapD [H]

Identifier: 225686783

GI number: 225686783

Start: 994462

End: 995316

Strand: Direct

Name: dapD [H]

Synonym: BMEA_B1014

Alternate gene names: 225686783

Gene position: 994462-995316 (Clockwise)

Preceding gene: 225686781

Following gene: 225686785

Centisome position: 83.88

GC content: 59.65

Gene sequence:

>855_bases
ATGACCAAGCCAGACCTCGCCTCCCTTGAGAAGACAATCGAAAAGGCTTTTGACGAGCGCGACGGTATCAACACGGCCAC
GCGCGGCGAAGTACGCGAAGCCGTCGAACAGTCGCTCATTCTGCTCGACCGCGGTGAAGTCCGTGTCGCAGAAAAACAGG
CGGACGGCAACTGGCATGTCAACCAATGGCTGAAGAAAGCGGTTCTGCTCTCCTTCCGCCTGAACCCGATGGAAGTCATC
AAGGGCGGCCCCGGCCAGTCCTCCTGGTGGGACAAGGTTCCCTCCAAGTTCGATGGCTGGACGGCAAACGAATTTGAAAA
GGCGGGCTTCCGCGCAGTTCCCAGCTGCATCGTGCGCCACTCGGCCTATATCGCGCCCAATGCCATCCTGATGCCCTCCT
TCGTCAATCTCGGCGCCTATGTCGATAAAGGCGCCATGATCGATACATGGGCAACCGTCGGCTCCTGCGCACAGATTGGC
AAAAACGTGCACCTTTCCGGCGGCGTCGGCATTGGCGGCGTTCTGGAACCCATGCAGGCGGGCCCCACCATTATTGAAGA
CAACTGCTTCATCGGCGCGCGTTCGGAAGTGGTCGAAGGCTGCATCGTGCGCGAAGGCTCGGTGCTCGGCATGGGCGTCT
TCATTGGCAAATCCACCAAGATCGTGGACCGCGCAACCGGAGAGGTCTTCTATGGCGAAGTGCCTCCCTATTCGGTCGTG
GTTGCTGGCACCATGCCGGGCAAGAACGTCCCCGGCGAAAACTGGGGGCCGAGCCTTTATTGCGCCGTGATTGTCAAACG
CGCGGACGAGAAGACCCGTTCCAAGACCTCGATCAACGAATTGCTGCGCGACTGA

Upstream 100 bases:

>100_bases
ATCGAGATTGACCCATATGACGCCTTCGCTTAATCAATTTCCCGACACACGGGCCGCATTCATGCTGCGCCTGCCACCCG
CTTCACGGAGACCGCTACTC

Downstream 100 bases:

>100_bases
CGATCAGCACATAGCTGGAGCATGATGGCTTAGGGCGTATTTCGATCTGATTGAATCAGATCGGCGCTCTAAGCCGTTGT
TTTGACGCGCATCTTTTCCA

Product: 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase

Products: NA

Alternate protein names: Tetrahydrodipicolinate N-succinyltransferase; THP succinyltransferase; Tetrahydropicolinate succinylase [H]

Number of amino acids: Translated: 284; Mature: 283

Protein sequence:

>284_residues
MTKPDLASLEKTIEKAFDERDGINTATRGEVREAVEQSLILLDRGEVRVAEKQADGNWHVNQWLKKAVLLSFRLNPMEVI
KGGPGQSSWWDKVPSKFDGWTANEFEKAGFRAVPSCIVRHSAYIAPNAILMPSFVNLGAYVDKGAMIDTWATVGSCAQIG
KNVHLSGGVGIGGVLEPMQAGPTIIEDNCFIGARSEVVEGCIVREGSVLGMGVFIGKSTKIVDRATGEVFYGEVPPYSVV
VAGTMPGKNVPGENWGPSLYCAVIVKRADEKTRSKTSINELLRD

Sequences:

>Translated_284_residues
MTKPDLASLEKTIEKAFDERDGINTATRGEVREAVEQSLILLDRGEVRVAEKQADGNWHVNQWLKKAVLLSFRLNPMEVI
KGGPGQSSWWDKVPSKFDGWTANEFEKAGFRAVPSCIVRHSAYIAPNAILMPSFVNLGAYVDKGAMIDTWATVGSCAQIG
KNVHLSGGVGIGGVLEPMQAGPTIIEDNCFIGARSEVVEGCIVREGSVLGMGVFIGKSTKIVDRATGEVFYGEVPPYSVV
VAGTMPGKNVPGENWGPSLYCAVIVKRADEKTRSKTSINELLRD
>Mature_283_residues
TKPDLASLEKTIEKAFDERDGINTATRGEVREAVEQSLILLDRGEVRVAEKQADGNWHVNQWLKKAVLLSFRLNPMEVIK
GGPGQSSWWDKVPSKFDGWTANEFEKAGFRAVPSCIVRHSAYIAPNAILMPSFVNLGAYVDKGAMIDTWATVGSCAQIGK
NVHLSGGVGIGGVLEPMQAGPTIIEDNCFIGARSEVVEGCIVREGSVLGMGVFIGKSTKIVDRATGEVFYGEVPPYSVVV
AGTMPGKNVPGENWGPSLYCAVIVKRADEKTRSKTSINELLRD

Specific function: Biosynthesis of diaminopimelate and lysine from aspartate semialdehyde; fourth step. [C]

COG id: COG2171

COG function: function code E; Tetrahydrodipicolinate N-succinyltransferase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transferase hexapeptide repeat family [H]

Homologues:

Organism=Escherichia coli, GI1786362, Length=279, Percent_Identity=63.0824372759857, Blast_Score=320, Evalue=6e-89,

Paralogues:

None

Copy number: 420 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005664
- InterPro:   IPR018357
- InterPro:   IPR023180
- InterPro:   IPR011004 [H]

Pfam domain/function: NA

EC number: =2.3.1.117 [H]

Molecular weight: Translated: 30726; Mature: 30595

Theoretical pI: Translated: 6.29; Mature: 6.29

Prosite motif: PS00101 HEXAPEP_TRANSFERASES

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKPDLASLEKTIEKAFDERDGINTATRGEVREAVEQSLILLDRGEVRVAEKQADGNWHV
CCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHEEEEECCCEEEEEECCCCCCCH
NQWLKKAVLLSFRLNPMEVIKGGPGQSSWWDKVPSKFDGWTANEFEKAGFRAVPSCIVRH
HHHHHHHHHHHHCCCHHHHHCCCCCCCCHHHHCCCCCCCCCCHHHHHCCHHHHHHHHHHH
SAYIAPNAILMPSFVNLGAYVDKGAMIDTWATVGSCAQIGKNVHLSGGVGIGGVLEPMQA
HHHCCCCCEECCHHHHHCCCCCCCCEEEHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHC
GPTIIEDNCFIGARSEVVEGCIVREGSVLGMGVFIGKSTKIVDRATGEVFYGEVPPYSVV
CCCEEECCCEECCHHHHHHHHHCCCCCEEEEEEEECCCCEEECCCCCCEEECCCCCCEEE
VAGTMPGKNVPGENWGPSLYCAVIVKRADEKTRSKTSINELLRD
EEECCCCCCCCCCCCCCHHEEHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TKPDLASLEKTIEKAFDERDGINTATRGEVREAVEQSLILLDRGEVRVAEKQADGNWHV
CCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHEEEEECCCEEEEEECCCCCCCH
NQWLKKAVLLSFRLNPMEVIKGGPGQSSWWDKVPSKFDGWTANEFEKAGFRAVPSCIVRH
HHHHHHHHHHHHCCCHHHHHCCCCCCCCHHHHCCCCCCCCCCHHHHHCCHHHHHHHHHHH
SAYIAPNAILMPSFVNLGAYVDKGAMIDTWATVGSCAQIGKNVHLSGGVGIGGVLEPMQA
HHHCCCCCEECCHHHHHCCCCCCCCEEEHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHC
GPTIIEDNCFIGARSEVVEGCIVREGSVLGMGVFIGKSTKIVDRATGEVFYGEVPPYSVV
CCCEEECCCEECCHHHHHHHHHCCCCCEEEEEEEECCCCEEECCCCCCEEECCCCCCEEE
VAGTMPGKNVPGENWGPSLYCAVIVKRADEKTRSKTSINELLRD
EEECCCCCCCCCCCCCCHHEEHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA