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The map label for this gene is oxaA [H]

Identifier: 225686778

GI number: 225686778

Start: 988837

End: 990669

Strand: Direct

Name: oxaA [H]

Synonym: BMEA_B1009

Alternate gene names: 225686778

Gene position: 988837-990669 (Clockwise)

Preceding gene: 225686777

Following gene: 225686779

Centisome position: 83.41

GC content: 56.08

Gene sequence:

>1833_bases
ATGGAAAATAAACGCAATTTCTTCATCACCATTGCCCTGTCCATCCTCATATTGGCGCTGTGGCAAGTGTTTTATCTGGG
TCCGAAAACGGAAGCCCAGCGGGAGCAGGCACGCATTGAGGAACAACAGCGACAAGCCCAGCAGGCAGCACAGAACAGGC
AGGCCAGCAGCAGCACAGGCGATACGCCGCAGATGCCGGCAAACCCCGATTCCATTCCGGGGCAAGGTGACACGAAGGCC
GCCGGCGCACCGCTGACGCGCGATGCCGCCATCGCGCAATCGCCACGCATCGAAATCGACACGCCTTCGCTGCGCGGCTC
GATCAATCTTACGGGCGCGCGCCTCGACGACCTCTATCTGAAAAAATATCACGAGACGGTCAGCGACAAATCCCCCGAAA
TCGAACTGCTCGCGCCTTCGTCGCTGAAGCAGGGCTATTTCGTGGAACTGGGCTTCACCGGCAATGATGCCACCGGCGCC
GTTCCCGGCCCCAACACGGTCTGGGTCGTGGAGGGCAACAACAAGCTGACGCCGTCCACACCCGTCACGCTGACCTATAC
CAATGACAAGAACCTCACTTTCAAGCGCGTCATTTCCGTTGACGACGCCTATATGTTCACCGTTGACGACACGATCATCA
ACAACGGCGGCTCAACCGTTTCGCTCGCCTCCTATGGCCGCGTGACCCGCTTCAACCAGCCCGAACATGCCAGCGCCACC
TATGTGCTGCATGAAGGCCTGATTGGCGTCATGGGGCAGGATGGCCTGCAGGAAATCAAATACGCCAAGATCGAAGACAA
TAAGGATATTTCCTTCAAGGACGTCATCGGCGGCTGGGTCGGCATCACCGACAAATATTGGGCGGCAACGCTCATTCCGC
CGCAGGACGAAAAGTTCACCGGCCGTTTCTCGCATTTCACGAATGATCGCCCACGCTATCAGTCGGACCTGTTGAGCGCT
CCGCTGACGGTTGCGCCCGGCCAGTCGCAGAAGATCCAGAACCGCGTTTTCGCAGGTGCAAAGGTCGTCAACACGATCCA
GAACTACGAAACGAAATACCACATCAAGCAGTTCGATCTTTTGATCGACTGGGGCTGGTTCTACTTCATCACCAAGCCGA
TGTTCTATCTCATCGACTGGATCTATAAGTTCACAGGCAATTTCGGCGTCGCCATTCTGGTCGTCACCGTTCTGCTCAAG
GCACTGTTCTTCCCGCTCGCCAACAAGTCATACAAGTCGATGGCGCGCATGAAGCTCATGCAGCCGAAGATGACGGAAAT
CCGCGAGAAATATGCGGACGACAAGATGAAGCAGCAGCAGGCCATGATGGAGCTGTACAAGCGGGAGAGGATCAATCCGC
TTGCTGGCTGCTGGCCGGTGCTGGTGCAGATTCCGGTGTTCTTCGCGCTCTACAAGGTTCTCTATGTCACCATTGAAATG
CGCCATGCGCCCTTCTTTGGCTGGATTCAGGATCTTGCCGCACCCGATCCGACCTCGATCTTCAACCTGTTCGGCCTTCT
GCCTTACACTGTGCCACACTTCCTGATGATCGGCGTCTGGCCTATCATCATGGGCATCACCATGTTCCTGCAAATGCGCA
TGAACCCGACGCCGCCCGATCCGACACAGGCTGCGATCTTCACCTGGATGCCCATCATCTTCACCTTCATGCTGGCTTCG
TTCCCGGCTGGTCTGGTGATCTACTGGGCATGGAACAACACGCTCTCGATCATCCAGCAGAGTGTCATCATGAAACGTCA
GGGCGTGAAGATCGAACTCTTCGACAACCTCAAGGGGCTTTTCAGGCGAAAACCGAAAGAGGCGAATAAATAA

Upstream 100 bases:

>100_bases
TCGCAACTGACCGAAGAACTCTCCCGGCGCATCACGGCCAAGGGCGAGCGGCGGAGCGGGGGGAAACGCCGAACGGAAAG
ACCGGAACCAGGACCCGTCA

Downstream 100 bases:

>100_bases
CTCCAGAAAAACCCCGCTTTGGCGGGGTTTTTTGTGCCAACATGGGCAGGGCGGTTGACAATGGAGCCCATTGCATTGAT
GCGTGTACTCAACAGAATAC

Product: putative inner membrane protein translocase component YidC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 610; Mature: 610

Protein sequence:

>610_residues
MENKRNFFITIALSILILALWQVFYLGPKTEAQREQARIEEQQRQAQQAAQNRQASSSTGDTPQMPANPDSIPGQGDTKA
AGAPLTRDAAIAQSPRIEIDTPSLRGSINLTGARLDDLYLKKYHETVSDKSPEIELLAPSSLKQGYFVELGFTGNDATGA
VPGPNTVWVVEGNNKLTPSTPVTLTYTNDKNLTFKRVISVDDAYMFTVDDTIINNGGSTVSLASYGRVTRFNQPEHASAT
YVLHEGLIGVMGQDGLQEIKYAKIEDNKDISFKDVIGGWVGITDKYWAATLIPPQDEKFTGRFSHFTNDRPRYQSDLLSA
PLTVAPGQSQKIQNRVFAGAKVVNTIQNYETKYHIKQFDLLIDWGWFYFITKPMFYLIDWIYKFTGNFGVAILVVTVLLK
ALFFPLANKSYKSMARMKLMQPKMTEIREKYADDKMKQQQAMMELYKRERINPLAGCWPVLVQIPVFFALYKVLYVTIEM
RHAPFFGWIQDLAAPDPTSIFNLFGLLPYTVPHFLMIGVWPIIMGITMFLQMRMNPTPPDPTQAAIFTWMPIIFTFMLAS
FPAGLVIYWAWNNTLSIIQQSVIMKRQGVKIELFDNLKGLFRRKPKEANK

Sequences:

>Translated_610_residues
MENKRNFFITIALSILILALWQVFYLGPKTEAQREQARIEEQQRQAQQAAQNRQASSSTGDTPQMPANPDSIPGQGDTKA
AGAPLTRDAAIAQSPRIEIDTPSLRGSINLTGARLDDLYLKKYHETVSDKSPEIELLAPSSLKQGYFVELGFTGNDATGA
VPGPNTVWVVEGNNKLTPSTPVTLTYTNDKNLTFKRVISVDDAYMFTVDDTIINNGGSTVSLASYGRVTRFNQPEHASAT
YVLHEGLIGVMGQDGLQEIKYAKIEDNKDISFKDVIGGWVGITDKYWAATLIPPQDEKFTGRFSHFTNDRPRYQSDLLSA
PLTVAPGQSQKIQNRVFAGAKVVNTIQNYETKYHIKQFDLLIDWGWFYFITKPMFYLIDWIYKFTGNFGVAILVVTVLLK
ALFFPLANKSYKSMARMKLMQPKMTEIREKYADDKMKQQQAMMELYKRERINPLAGCWPVLVQIPVFFALYKVLYVTIEM
RHAPFFGWIQDLAAPDPTSIFNLFGLLPYTVPHFLMIGVWPIIMGITMFLQMRMNPTPPDPTQAAIFTWMPIIFTFMLAS
FPAGLVIYWAWNNTLSIIQQSVIMKRQGVKIELFDNLKGLFRRKPKEANK
>Mature_610_residues
MENKRNFFITIALSILILALWQVFYLGPKTEAQREQARIEEQQRQAQQAAQNRQASSSTGDTPQMPANPDSIPGQGDTKA
AGAPLTRDAAIAQSPRIEIDTPSLRGSINLTGARLDDLYLKKYHETVSDKSPEIELLAPSSLKQGYFVELGFTGNDATGA
VPGPNTVWVVEGNNKLTPSTPVTLTYTNDKNLTFKRVISVDDAYMFTVDDTIINNGGSTVSLASYGRVTRFNQPEHASAT
YVLHEGLIGVMGQDGLQEIKYAKIEDNKDISFKDVIGGWVGITDKYWAATLIPPQDEKFTGRFSHFTNDRPRYQSDLLSA
PLTVAPGQSQKIQNRVFAGAKVVNTIQNYETKYHIKQFDLLIDWGWFYFITKPMFYLIDWIYKFTGNFGVAILVVTVLLK
ALFFPLANKSYKSMARMKLMQPKMTEIREKYADDKMKQQQAMMELYKRERINPLAGCWPVLVQIPVFFALYKVLYVTIEM
RHAPFFGWIQDLAAPDPTSIFNLFGLLPYTVPHFLMIGVWPIIMGITMFLQMRMNPTPPDPTQAAIFTWMPIIFTFMLAS
FPAGLVIYWAWNNTLSIIQQSVIMKRQGVKIELFDNLKGLFRRKPKEANK

Specific function: Required for the insertion of integral membrane proteins into the membrane. Probably plays an essential role in the integration of proteins of the respiratory chain complexes. Involved in integration of membrane proteins that insert dependently and indepe

COG id: COG0706

COG function: function code U; Preprotein translocase subunit YidC

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OXA1/oxaA family. Type 1 subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790140, Length=536, Percent_Identity=31.7164179104478, Blast_Score=265, Evalue=4e-72,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019998
- InterPro:   IPR001708 [H]

Pfam domain/function: PF02096 60KD_IMP [H]

EC number: NA

Molecular weight: Translated: 69068; Mature: 69068

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENKRNFFITIALSILILALWQVFYLGPKTEAQREQARIEEQQRQAQQAAQNRQASSSTG
CCCCCCEEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
DTPQMPANPDSIPGQGDTKAAGAPLTRDAAIAQSPRIEIDTPSLRGSINLTGARLDDLYL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCEEEECCCCCCEEEECCCHHHHHHH
KKYHETVSDKSPEIELLAPSSLKQGYFVELGFTGNDATGAVPGPNTVWVVEGNNKLTPST
HHHHHHHCCCCCCEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEECCCEECCCC
PVTLTYTNDKNLTFKRVISVDDAYMFTVDDTIINNGGSTVSLASYGRVTRFNQPEHASAT
CEEEEEECCCCCEEEEEEECCCEEEEEECHHEECCCCCEEEEECCCCCCCCCCCCCCCCE
YVLHEGLIGVMGQDGLQEIKYAKIEDNKDISFKDVIGGWVGITDKYWAATLIPPQDEKFT
EEECCCCHHHCCCCHHHHCCEEECCCCCCCCHHHHHCHHHCCCCCCCEEEECCCCCCCCC
GRFSHFTNDRPRYQSDLLSAPLTVAPGQSQKIQNRVFAGAKVVNTIQNYETKYHIKQFDL
CHHHHCCCCCCCHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHHHHCCHHEEEEEEEE
LIDWGWFYFITKPMFYLIDWIYKFTGNFGVAILVVTVLLKALFFPLANKSYKSMARMKLM
EEECHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHC
QPKMTEIREKYADDKMKQQQAMMELYKRERINPLAGCWPVLVQIPVFFALYKVLYVTIEM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEE
RHAPFFGWIQDLAAPDPTSIFNLFGLLPYTVPHFLMIGVWPIIMGITMFLQMRMNPTPPD
CCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PTQAAIFTWMPIIFTFMLASFPAGLVIYWAWNNTLSIIQQSVIMKRQGVKIELFDNLKGL
CCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHCCCEEEEHHHHHHH
FRRKPKEANK
HHCCCCCCCC
>Mature Secondary Structure
MENKRNFFITIALSILILALWQVFYLGPKTEAQREQARIEEQQRQAQQAAQNRQASSSTG
CCCCCCEEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
DTPQMPANPDSIPGQGDTKAAGAPLTRDAAIAQSPRIEIDTPSLRGSINLTGARLDDLYL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCEEEECCCCCCEEEECCCHHHHHHH
KKYHETVSDKSPEIELLAPSSLKQGYFVELGFTGNDATGAVPGPNTVWVVEGNNKLTPST
HHHHHHHCCCCCCEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEECCCEECCCC
PVTLTYTNDKNLTFKRVISVDDAYMFTVDDTIINNGGSTVSLASYGRVTRFNQPEHASAT
CEEEEEECCCCCEEEEEEECCCEEEEEECHHEECCCCCEEEEECCCCCCCCCCCCCCCCE
YVLHEGLIGVMGQDGLQEIKYAKIEDNKDISFKDVIGGWVGITDKYWAATLIPPQDEKFT
EEECCCCHHHCCCCHHHHCCEEECCCCCCCCHHHHHCHHHCCCCCCCEEEECCCCCCCCC
GRFSHFTNDRPRYQSDLLSAPLTVAPGQSQKIQNRVFAGAKVVNTIQNYETKYHIKQFDL
CHHHHCCCCCCCHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHHHHCCHHEEEEEEEE
LIDWGWFYFITKPMFYLIDWIYKFTGNFGVAILVVTVLLKALFFPLANKSYKSMARMKLM
EEECHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHC
QPKMTEIREKYADDKMKQQQAMMELYKRERINPLAGCWPVLVQIPVFFALYKVLYVTIEM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEE
RHAPFFGWIQDLAAPDPTSIFNLFGLLPYTVPHFLMIGVWPIIMGITMFLQMRMNPTPPD
CCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PTQAAIFTWMPIIFTFMLASFPAGLVIYWAWNNTLSIIQQSVIMKRQGVKIELFDNLKGL
CCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHCCCEEEEHHHHHHH
FRRKPKEANK
HHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11756688 [H]