| Definition | Brucella melitensis ATCC 23457 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_012442 |
| Length | 1,185,518 |
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The map label for this gene is dppD [C]
Identifier: 225686764
GI number: 225686764
Start: 976941
End: 977966
Strand: Reverse
Name: dppD [C]
Synonym: BMEA_B0994
Alternate gene names: 225686764
Gene position: 977966-976941 (Counterclockwise)
Preceding gene: 225686765
Following gene: 225686763
Centisome position: 82.49
GC content: 62.96
Gene sequence:
>1026_bases ATGACAAAACCACTGCTCGAAATGGACAATATGTCCGTCGAACTGCCAATCGGCCTCAAGGTTGCAGATATCGTGTCCGA TATCACGCTGACGCTCAATCGCGGCGAACGCCTTGGCGTAGTGGGCGAATCCGGCAGCGGCAAGTCGATCACCGCCCTTG CCGCCATGGGGCTGCTGCCCGACCGGATGCGTGTGCGCGGTACATTGCGCTTCGATGGGCAGGACCTTGCCGCCATGCCG GAAGCCGAATTGTGCAGGATGCGCGGACGGCGCATGGCGATGATCTTTCAGGAGCCGATGACGGCGCTCAATCCGGTCAA GACCATTGGCGCGCAGATTGCCGAAGGACGCCGCCTGCACCTTGGCGAAAGCCGGGCGGATGCGGAGCGTGAAGCGCGCA GGTTGCTTGATCGCGTCGGCTTGCCTGCACCCCGCTTCAATCTCGATCTTTATCCGCACCAGCTTTCCGGCGGGCAGCGC CAGCGTGTGATGATTGCCATGGCGATTGCGTGTGAGCCGGACCTGTTGATAGCCGATGAGCCGACGACAGCCCTCGACGT GACGGTTCAGGCGCAGATTCTTGATCTGATGGATGAGTTGATCGATGAAACCGGCACGGCGCTGATGCTGATCACCCATG ATCTTGGCGTGGTTTCGGAAATGACTGACCGCATTGCGGTCATGTATGCGGGCCGTATCGTTGAGACCGGACGCACCAAC GCCGTGTTCCATCGCATGGCACATCCCTATGCGCGCGGGCTTTTTGCAGCGTCGCCGCATGGCGCGGCGCTCGTACGCCA CAGCGCCACCGGAAGACCTCGCCTTGCGGCCATTCCCGGCGTCGTGCCCGACCCGCTGGCGCGCCCGCCGCATTGCACCT TTGCCGACCGCTGCGCCTTCGTGCAGGGCGATTGCCGTCGGGCAATCCCGCCGCTCGACCGGCTTGGCGAGGATGAGGGC ATTGCGCATCGCGCTGCCTGTTTCCATCCGCGTACCGGCAATGTGGTGGCAGAGGTGCAGGCATGA
Upstream 100 bases:
>100_bases CCATTTTCCCCGGCCTTGCCATCACGCTTGCCGTACTTGGCCTCAACATGCTGGGCGACGGATTGCGTGACGTGCTCGAT CCGCGCGTCAGGAGGCAGAG
Downstream 100 bases:
>100_bases GCGACATGATCTTGCAGGTACGTGATGTCGTGCGGGAGTATCAGCTTGCGCGCGCGTCGTTTTTCTTAAAGCCAGCTTCC TTGCGTGTTCTCCACGGTGT
Product: oligopeptide/dipeptide ABC transporter ATPase
Products: ADP; phosphate; dipeptides [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 341; Mature: 340
Protein sequence:
>341_residues MTKPLLEMDNMSVELPIGLKVADIVSDITLTLNRGERLGVVGESGSGKSITALAAMGLLPDRMRVRGTLRFDGQDLAAMP EAELCRMRGRRMAMIFQEPMTALNPVKTIGAQIAEGRRLHLGESRADAEREARRLLDRVGLPAPRFNLDLYPHQLSGGQR QRVMIAMAIACEPDLLIADEPTTALDVTVQAQILDLMDELIDETGTALMLITHDLGVVSEMTDRIAVMYAGRIVETGRTN AVFHRMAHPYARGLFAASPHGAALVRHSATGRPRLAAIPGVVPDPLARPPHCTFADRCAFVQGDCRRAIPPLDRLGEDEG IAHRAACFHPRTGNVVAEVQA
Sequences:
>Translated_341_residues MTKPLLEMDNMSVELPIGLKVADIVSDITLTLNRGERLGVVGESGSGKSITALAAMGLLPDRMRVRGTLRFDGQDLAAMP EAELCRMRGRRMAMIFQEPMTALNPVKTIGAQIAEGRRLHLGESRADAEREARRLLDRVGLPAPRFNLDLYPHQLSGGQR QRVMIAMAIACEPDLLIADEPTTALDVTVQAQILDLMDELIDETGTALMLITHDLGVVSEMTDRIAVMYAGRIVETGRTN AVFHRMAHPYARGLFAASPHGAALVRHSATGRPRLAAIPGVVPDPLARPPHCTFADRCAFVQGDCRRAIPPLDRLGEDEG IAHRAACFHPRTGNVVAEVQA >Mature_340_residues TKPLLEMDNMSVELPIGLKVADIVSDITLTLNRGERLGVVGESGSGKSITALAAMGLLPDRMRVRGTLRFDGQDLAAMPE AELCRMRGRRMAMIFQEPMTALNPVKTIGAQIAEGRRLHLGESRADAEREARRLLDRVGLPAPRFNLDLYPHQLSGGQRQ RVMIAMAIACEPDLLIADEPTTALDVTVQAQILDLMDELIDETGTALMLITHDLGVVSEMTDRIAVMYAGRIVETGRTNA VFHRMAHPYARGLFAASPHGAALVRHSATGRPRLAAIPGVVPDPLARPPHCTFADRCAFVQGDCRRAIPPLDRLGEDEGI AHRAACFHPRTGNVVAEVQA
Specific function: Probably part of an ABC transporter complex that could be involved in peptide import. Probably responsible for energy coupling to the transport system [H]
COG id: COG0444
COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI255708477, Length=219, Percent_Identity=33.3333333333333, Blast_Score=77, Evalue=3e-14, Organism=Homo sapiens, GI9961250, Length=235, Percent_Identity=31.4893617021277, Blast_Score=76, Evalue=5e-14, Organism=Homo sapiens, GI4505771, Length=235, Percent_Identity=31.4893617021277, Blast_Score=76, Evalue=5e-14, Organism=Homo sapiens, GI9961252, Length=235, Percent_Identity=31.4893617021277, Blast_Score=76, Evalue=5e-14, Organism=Homo sapiens, GI156105685, Length=266, Percent_Identity=30.8270676691729, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI148612844, Length=220, Percent_Identity=33.1818181818182, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI42741659, Length=234, Percent_Identity=31.1965811965812, Blast_Score=73, Evalue=4e-13, Organism=Homo sapiens, GI9665248, Length=232, Percent_Identity=31.8965517241379, Blast_Score=72, Evalue=7e-13, Organism=Homo sapiens, GI171184400, Length=241, Percent_Identity=29.045643153527, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI9955963, Length=245, Percent_Identity=29.3877551020408, Blast_Score=66, Evalue=4e-11, Organism=Escherichia coli, GI1789963, Length=327, Percent_Identity=46.7889908256881, Blast_Score=278, Evalue=3e-76, Organism=Escherichia coli, GI48994883, Length=306, Percent_Identity=48.0392156862745, Blast_Score=270, Evalue=8e-74, Organism=Escherichia coli, GI1787759, Length=334, Percent_Identity=43.4131736526946, Blast_Score=258, Evalue=5e-70, Organism=Escherichia coli, GI145693107, Length=268, Percent_Identity=50, Blast_Score=247, Evalue=8e-67, Organism=Escherichia coli, GI1788506, Length=263, Percent_Identity=47.148288973384, Blast_Score=226, Evalue=2e-60, Organism=Escherichia coli, GI1789962, Length=336, Percent_Identity=35.1190476190476, Blast_Score=196, Evalue=1e-51, Organism=Escherichia coli, GI1787548, Length=308, Percent_Identity=36.038961038961, Blast_Score=195, Evalue=3e-51, Organism=Escherichia coli, GI1787500, Length=321, Percent_Identity=38.3177570093458, Blast_Score=195, Evalue=4e-51, Organism=Escherichia coli, GI1789890, Length=243, Percent_Identity=41.5637860082305, Blast_Score=167, Evalue=8e-43, Organism=Escherichia coli, GI1787758, Length=317, Percent_Identity=34.7003154574132, Blast_Score=160, Evalue=1e-40, Organism=Escherichia coli, GI48994997, Length=264, Percent_Identity=36.7424242424242, Blast_Score=143, Evalue=2e-35, Organism=Escherichia coli, GI1789891, Length=213, Percent_Identity=38.0281690140845, Blast_Score=126, Evalue=2e-30, Organism=Escherichia coli, GI1786398, Length=256, Percent_Identity=32.03125, Blast_Score=122, Evalue=3e-29, Organism=Escherichia coli, GI1787547, Length=266, Percent_Identity=31.203007518797, Blast_Score=116, Evalue=2e-27, Organism=Escherichia coli, GI1789032, Length=234, Percent_Identity=35.4700854700855, Blast_Score=114, Evalue=1e-26, Organism=Escherichia coli, GI1786703, Length=235, Percent_Identity=35.3191489361702, Blast_Score=110, Evalue=1e-25, Organism=Escherichia coli, GI1787089, Length=213, Percent_Identity=38.4976525821596, Blast_Score=110, Evalue=2e-25, Organism=Escherichia coli, GI1788225, Length=233, Percent_Identity=33.9055793991416, Blast_Score=107, Evalue=1e-24, Organism=Escherichia coli, GI1786872, Length=219, Percent_Identity=34.703196347032, Blast_Score=106, Evalue=3e-24, Organism=Escherichia coli, GI87081834, Length=235, Percent_Identity=33.1914893617021, Blast_Score=101, Evalue=7e-23, Organism=Escherichia coli, GI1787029, Length=215, Percent_Identity=33.953488372093, Blast_Score=101, Evalue=8e-23, Organism=Escherichia coli, GI87081791, Length=252, Percent_Identity=31.7460317460317, Blast_Score=99, Evalue=3e-22, Organism=Escherichia coli, GI1788450, Length=242, Percent_Identity=32.2314049586777, Blast_Score=99, Evalue=4e-22, Organism=Escherichia coli, GI1787105, Length=233, Percent_Identity=32.618025751073, Blast_Score=98, Evalue=1e-21, Organism=Escherichia coli, GI1788761, Length=223, Percent_Identity=31.8385650224215, Blast_Score=97, Evalue=2e-21, Organism=Escherichia coli, GI1787370, Length=232, Percent_Identity=29.3103448275862, Blast_Score=94, Evalue=2e-20, Organism=Escherichia coli, GI1786563, Length=213, Percent_Identity=35.2112676056338, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI1787712, Length=234, Percent_Identity=30.3418803418803, Blast_Score=92, Evalue=7e-20, Organism=Escherichia coli, GI1790162, Length=224, Percent_Identity=29.4642857142857, Blast_Score=91, Evalue=1e-19, Organism=Escherichia coli, GI1789672, Length=229, Percent_Identity=31.0043668122271, Blast_Score=89, Evalue=5e-19, Organism=Escherichia coli, GI1788644, Length=177, Percent_Identity=32.7683615819209, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI1790467, Length=240, Percent_Identity=30.4166666666667, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI87081709, Length=286, Percent_Identity=27.972027972028, Blast_Score=86, Evalue=4e-18, Organism=Escherichia coli, GI1789873, Length=206, Percent_Identity=32.0388349514563, Blast_Score=85, Evalue=6e-18, Organism=Escherichia coli, GI1789991, Length=229, Percent_Identity=27.0742358078603, Blast_Score=84, Evalue=2e-17, Organism=Escherichia coli, GI1790525, Length=220, Percent_Identity=29.5454545454545, Blast_Score=84, Evalue=2e-17, Organism=Escherichia coli, GI1786253, Length=243, Percent_Identity=29.6296296296296, Blast_Score=81, Evalue=9e-17, Organism=Escherichia coli, GI1786803, Length=227, Percent_Identity=28.1938325991189, Blast_Score=79, Evalue=4e-16, Organism=Escherichia coli, GI1789586, Length=221, Percent_Identity=31.6742081447964, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI87082267, Length=239, Percent_Identity=29.2887029288703, Blast_Score=75, Evalue=4e-15, Organism=Escherichia coli, GI1786319, Length=242, Percent_Identity=26.8595041322314, Blast_Score=75, Evalue=6e-15, Organism=Escherichia coli, GI48995001, Length=237, Percent_Identity=29.957805907173, Blast_Score=75, Evalue=8e-15, Organism=Escherichia coli, GI1786345, Length=220, Percent_Identity=30, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1790739, Length=232, Percent_Identity=29.7413793103448, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI48994943, Length=270, Percent_Identity=28.5185185185185, Blast_Score=72, Evalue=4e-14, Organism=Escherichia coli, GI1790534, Length=211, Percent_Identity=30.3317535545024, Blast_Score=72, Evalue=5e-14, Organism=Escherichia coli, GI1788165, Length=226, Percent_Identity=26.9911504424779, Blast_Score=72, Evalue=5e-14, Organism=Escherichia coli, GI1787792, Length=249, Percent_Identity=27.710843373494, Blast_Score=72, Evalue=6e-14, Organism=Escherichia coli, GI1788053, Length=218, Percent_Identity=27.0642201834862, Blast_Score=71, Evalue=1e-13, Organism=Escherichia coli, GI1790190, Length=234, Percent_Identity=27.7777777777778, Blast_Score=71, Evalue=1e-13, Organism=Escherichia coli, GI1787164, Length=83, Percent_Identity=40.9638554216867, Blast_Score=69, Evalue=6e-13, Organism=Escherichia coli, GI1789864, Length=245, Percent_Identity=25.7142857142857, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI1786654, Length=218, Percent_Identity=29.8165137614679, Blast_Score=63, Evalue=3e-11, Organism=Escherichia coli, GI1787143, Length=235, Percent_Identity=30.6382978723404, Blast_Score=62, Evalue=5e-11, Organism=Escherichia coli, GI1787112, Length=229, Percent_Identity=28.3842794759825, Blast_Score=62, Evalue=8e-11, Organism=Caenorhabditis elegans, GI193209708, Length=258, Percent_Identity=31.7829457364341, Blast_Score=92, Evalue=4e-19, Organism=Caenorhabditis elegans, GI193202349, Length=219, Percent_Identity=31.0502283105023, Blast_Score=80, Evalue=2e-15, Organism=Caenorhabditis elegans, GI115535101, Length=218, Percent_Identity=29.3577981651376, Blast_Score=75, Evalue=6e-14, Organism=Caenorhabditis elegans, GI71992290, Length=236, Percent_Identity=27.1186440677966, Blast_Score=72, Evalue=5e-13, Organism=Caenorhabditis elegans, GI17567265, Length=218, Percent_Identity=28.8990825688073, Blast_Score=72, Evalue=6e-13, Organism=Caenorhabditis elegans, GI17567269, Length=238, Percent_Identity=29.4117647058824, Blast_Score=71, Evalue=9e-13, Organism=Caenorhabditis elegans, GI17569145, Length=258, Percent_Identity=29.0697674418605, Blast_Score=69, Evalue=4e-12, Organism=Caenorhabditis elegans, GI193208177, Length=225, Percent_Identity=28, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17558664, Length=237, Percent_Identity=27.4261603375527, Blast_Score=66, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6321752, Length=262, Percent_Identity=24.0458015267176, Blast_Score=66, Evalue=8e-12, Organism=Saccharomyces cerevisiae, GI6323217, Length=242, Percent_Identity=30.5785123966942, Blast_Score=63, Evalue=7e-11, Organism=Drosophila melanogaster, GI24641565, Length=244, Percent_Identity=31.9672131147541, Blast_Score=81, Evalue=1e-15, Organism=Drosophila melanogaster, GI28574533, Length=253, Percent_Identity=24.901185770751, Blast_Score=76, Evalue=4e-14, Organism=Drosophila melanogaster, GI85726357, Length=243, Percent_Identity=27.9835390946502, Blast_Score=75, Evalue=7e-14, Organism=Drosophila melanogaster, GI28574744, Length=225, Percent_Identity=27.1111111111111, Blast_Score=71, Evalue=1e-12, Organism=Drosophila melanogaster, GI24659289, Length=220, Percent_Identity=30, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI281363262, Length=237, Percent_Identity=27.4261603375527, Blast_Score=65, Evalue=5e-11, Organism=Drosophila melanogaster, GI24653245, Length=237, Percent_Identity=27.4261603375527, Blast_Score=65, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 - InterPro: IPR010066 - InterPro: IPR013563 [H]
Pfam domain/function: PF00005 ABC_tran; PF08352 oligo_HPY [H]
EC number: NA
Molecular weight: Translated: 37052; Mature: 36920
Theoretical pI: Translated: 6.85; Mature: 6.85
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKPLLEMDNMSVELPIGLKVADIVSDITLTLNRGERLGVVGESGSGKSITALAAMGLLP CCCCCCCCCCCEEEECCCCCHHHHHCCEEEEEECCCEEEEEECCCCCCEEHHHHHHCCCC DRMRVRGTLRFDGQDLAAMPEAELCRMRGRRMAMIFQEPMTALNPVKTIGAQIAEGRRLH CCCEEEEEEEECCCCCCCCCHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCEEE LGESRADAEREARRLLDRVGLPAPRFNLDLYPHQLSGGQRQRVMIAMAIACEPDLLIADE CCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCHHCCCCCCEEEEEEEEEECCCCEEEECC PTTALDVTVQAQILDLMDELIDETGTALMLITHDLGVVSEMTDRIAVMYAGRIVETGRTN CCCEEEEEHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHEEEEEECEEEECCCCH AVFHRMAHPYARGLFAASPHGAALVRHSATGRPRLAAIPGVVPDPLARPPHCTFADRCAF HHHHHHHCHHHHCCCCCCCCCCEEEEECCCCCCCEEECCCCCCCCCCCCCCCCHHHHHEE VQGDCRRAIPPLDRLGEDEGIAHRAACFHPRTGNVVAEVQA ECCCHHHCCCCHHHCCCCCCCHHHHHCCCCCCCCEEEEECC >Mature Secondary Structure TKPLLEMDNMSVELPIGLKVADIVSDITLTLNRGERLGVVGESGSGKSITALAAMGLLP CCCCCCCCCCEEEECCCCCHHHHHCCEEEEEECCCEEEEEECCCCCCEEHHHHHHCCCC DRMRVRGTLRFDGQDLAAMPEAELCRMRGRRMAMIFQEPMTALNPVKTIGAQIAEGRRLH CCCEEEEEEEECCCCCCCCCHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCEEE LGESRADAEREARRLLDRVGLPAPRFNLDLYPHQLSGGQRQRVMIAMAIACEPDLLIADE CCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCHHCCCCCCEEEEEEEEEECCCCEEEECC PTTALDVTVQAQILDLMDELIDETGTALMLITHDLGVVSEMTDRIAVMYAGRIVETGRTN CCCEEEEEHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHEEEEEECEEEECCCCH AVFHRMAHPYARGLFAASPHGAALVRHSATGRPRLAAIPGVVPDPLARPPHCTFADRCAF HHHHHHHCHHHHCCCCCCCCCCEEEEECCCCCCCEEECCCCCCCCCCCCCCCCHHHHHEE VQGDCRRAIPPLDRLGEDEGIAHRAACFHPRTGNVVAEVQA ECCCHHHCCCCHHHCCCCCCCHHHHHCCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; dipeptides [Periplasm]; H2O [C]
Specific reaction: ATP + dipeptides [Periplasm] + H2O = ADP + phosphate + dipeptides [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA