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The map label for this gene is yedY [H]

Identifier: 225686747

GI number: 225686747

Start: 956177

End: 957136

Strand: Direct

Name: yedY [H]

Synonym: BMEA_B0975

Alternate gene names: 225686747

Gene position: 956177-957136 (Clockwise)

Preceding gene: 225686745

Following gene: 225686748

Centisome position: 80.65

GC content: 57.19

Gene sequence:

>960_bases
ATGAGCAGCTTCAAACCCAGCCGCTTTTCGACGGCCCGCCTCACTGGCGATGCGGTGACACCGAAGAGTATTTATCTGCG
CCGACGTGAATTCATGATCGGTCTCGGCGCTATTGCCACAACAGGTGCAGCCTCCTCCGCCTTTGCCGACCCGCTGGAAG
CCAAAACCACCGCCTATAAGGTCGATGAAAAACTGACCCCGCAAAATGCGGTGACGACCTATAACAATTTCTACGAATTC
GGGACCGACAAGAGCGATGCTTCAGCCAATTCCGGCAGCTTTAAGCCGCTGCCATGGAAGCTCACCGTTGATGGGCTGGT
AAAACAGCCAAAGGAATTCGACGTCGAGGAATTGATCGCCAAAATGCCGCTGGAAGAGCGCATCTACCGGATGCGTTGCG
TGGAAGCATGGTCGATGGTCATTCCCTGGATCGGGTTCCCGCTCTCAAGCCTTCTGTCGCAAGTGGAGCCGCTCGGCTCG
GCCAAATACATCGCCTTCACAGGCGTTGTGCGCCCAGATGAAATGCCCGGACAAACCGGACTGTTTCAGGCGCTGAACTG
GCCCTATGTCGAGGGTTTGCGTCTTGATGAGGCAATGCACCCGCTCACCATTCTTTCCGTCGGGCTTTACGGCGAAACAT
TGCCCAACGCGAATGGTGCACCGATCCGGCTTGTCGTTCCATGGAAATACGGCTTCAAGGGCATCAAGGCCATCACCAGG
ATCAGCTTCGTGGAAAAGCAGCCGCCGACATCATGGAATCGGCAGGCCGCCAATGAATATGGCTTCTATGCCAATGTGAA
CCCGGCAGTGGACCACCCGCGCTGGAGCCAGGCAACGGAACGGCGCATCGGGGAAGGAGGCTTCTTCGGTTCTGACCGCC
GCCCCACCCTGCCCTTCAACGGCTATGGCGAGGAAGTCGCATCGCTCTATGCCGGCATGGACCTGAAGGCGAATTACTGA

Upstream 100 bases:

>100_bases
GTGAGCTATAATCCGCCCATACATTATCCATGTTTTTGACGCCTTTACGTGAGAATCTGATGCGAACCCGATGGCAACCG
AAAAGAAGTGAGAACGCCCC

Downstream 100 bases:

>100_bases
CATGGCGGCGGCAACCGGAACGCGCAAGAAAAAGACGCCGCGCCCCGGCCAATGGAAGCTATGGCTTCTTTATACGGCAG
GTTTTGTCCCGGCTGTGTGG

Product: putative sulfite oxidase subunit YedY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 318

Protein sequence:

>319_residues
MSSFKPSRFSTARLTGDAVTPKSIYLRRREFMIGLGAIATTGAASSAFADPLEAKTTAYKVDEKLTPQNAVTTYNNFYEF
GTDKSDASANSGSFKPLPWKLTVDGLVKQPKEFDVEELIAKMPLEERIYRMRCVEAWSMVIPWIGFPLSSLLSQVEPLGS
AKYIAFTGVVRPDEMPGQTGLFQALNWPYVEGLRLDEAMHPLTILSVGLYGETLPNANGAPIRLVVPWKYGFKGIKAITR
ISFVEKQPPTSWNRQAANEYGFYANVNPAVDHPRWSQATERRIGEGGFFGSDRRPTLPFNGYGEEVASLYAGMDLKANY

Sequences:

>Translated_319_residues
MSSFKPSRFSTARLTGDAVTPKSIYLRRREFMIGLGAIATTGAASSAFADPLEAKTTAYKVDEKLTPQNAVTTYNNFYEF
GTDKSDASANSGSFKPLPWKLTVDGLVKQPKEFDVEELIAKMPLEERIYRMRCVEAWSMVIPWIGFPLSSLLSQVEPLGS
AKYIAFTGVVRPDEMPGQTGLFQALNWPYVEGLRLDEAMHPLTILSVGLYGETLPNANGAPIRLVVPWKYGFKGIKAITR
ISFVEKQPPTSWNRQAANEYGFYANVNPAVDHPRWSQATERRIGEGGFFGSDRRPTLPFNGYGEEVASLYAGMDLKANY
>Mature_318_residues
SSFKPSRFSTARLTGDAVTPKSIYLRRREFMIGLGAIATTGAASSAFADPLEAKTTAYKVDEKLTPQNAVTTYNNFYEFG
TDKSDASANSGSFKPLPWKLTVDGLVKQPKEFDVEELIAKMPLEERIYRMRCVEAWSMVIPWIGFPLSSLLSQVEPLGSA
KYIAFTGVVRPDEMPGQTGLFQALNWPYVEGLRLDEAMHPLTILSVGLYGETLPNANGAPIRLVVPWKYGFKGIKAITRI
SFVEKQPPTSWNRQAANEYGFYANVNPAVDHPRWSQATERRIGEGGFFGSDRRPTLPFNGYGEEVASLYAGMDLKANY

Specific function: The exact function is not known. Can catalyze the reduction of a variety of substrates like dimethyl sulfoxide, trimethylamine N-oxide, phenylmethyl sulfoxide and L-methionine sulfoxide. Cannot reduce cyclic N-oxides. Shows no activity as sulfite oxidase

COG id: COG2041

COG function: function code R; Sulfite oxidase and related enzymes

Gene ontology:

Cell location: Periplasm. Note=Is attached to the inner membrane when interacting with the yedZ subunit (By similarity) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yedY family [H]

Homologues:

Organism=Escherichia coli, GI1788282, Length=323, Percent_Identity=53.8699690402477, Blast_Score=352, Evalue=2e-98,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000572
- InterPro:   IPR006311
- InterPro:   IPR022867 [H]

Pfam domain/function: PF00174 Oxidored_molyb [H]

EC number: NA

Molecular weight: Translated: 35421; Mature: 35289

Theoretical pI: Translated: 8.76; Mature: 8.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSFKPSRFSTARLTGDAVTPKSIYLRRREFMIGLGAIATTGAASSAFADPLEAKTTAYK
CCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHEEHHHHHHCCCCCHHHCCCHHHHHHHEE
VDEKLTPQNAVTTYNNFYEFGTDKSDASANSGSFKPLPWKLTVDGLVKQPKEFDVEELIA
CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEHHHHHCCCCCCCHHHHHH
KMPLEERIYRMRCVEAWSMVIPWIGFPLSSLLSQVEPLGSAKYIAFTGVVRPDEMPGQTG
HCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCC
LFQALNWPYVEGLRLDEAMHPLTILSVGLYGETLPNANGAPIRLVVPWKYGFKGIKAITR
HHHHCCCCHHCCEEHHHHHCCCEEEEECCCCCCCCCCCCCCEEEEECCHHCHHHHHHHHH
ISFVEKQPPTSWNRQAANEYGFYANVNPAVDHPRWSQATERRIGEGGFFGSDRRPTLPFN
HHHHHCCCCCCCCHHHHHHCCCEECCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCC
GYGEEVASLYAGMDLKANY
CCHHHHHHHHHCCCEECCC
>Mature Secondary Structure 
SSFKPSRFSTARLTGDAVTPKSIYLRRREFMIGLGAIATTGAASSAFADPLEAKTTAYK
CCCCCCCCCEEEECCCCCCCHHHHHHHHHHHEEHHHHHHCCCCCHHHCCCHHHHHHHEE
VDEKLTPQNAVTTYNNFYEFGTDKSDASANSGSFKPLPWKLTVDGLVKQPKEFDVEELIA
CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEHHHHHCCCCCCCHHHHHH
KMPLEERIYRMRCVEAWSMVIPWIGFPLSSLLSQVEPLGSAKYIAFTGVVRPDEMPGQTG
HCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCC
LFQALNWPYVEGLRLDEAMHPLTILSVGLYGETLPNANGAPIRLVVPWKYGFKGIKAITR
HHHHCCCCHHCCEEHHHHHCCCEEEEECCCCCCCCCCCCCCEEEEECCHHCHHHHHHHHH
ISFVEKQPPTSWNRQAANEYGFYANVNPAVDHPRWSQATERRIGEGGFFGSDRRPTLPFN
HHHHHCCCCCCCCHHHHHHCCCEECCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCC
GYGEEVASLYAGMDLKANY
CCHHHHHHHHHCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Mo [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11756688 [H]