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The map label for this gene is puuD [H]

Identifier: 225686738

GI number: 225686738

Start: 947632

End: 948405

Strand: Direct

Name: puuD [H]

Synonym: BMEA_B0966

Alternate gene names: 225686738

Gene position: 947632-948405 (Clockwise)

Preceding gene: 225686729

Following gene: 225686743

Centisome position: 79.93

GC content: 59.56

Gene sequence:

>774_bases
ATGAATCCAAATATCAAGAAGTCTTCCCGTCCTCTGGTTGCCGTGCCAACCGACGTAAAGCCGTTTGAAAACTATGTCTG
GCATGCCGCGCCCGAGCAATATCTGGCCGCAGCCATCGAGGTTGCACAAGTAACGCCGCTTCTGGTGCCAAGTTTCGGCG
ACAAGATGGATTTCGACGCTATTCTCGATGCCGTGGACGGCCTGCTCGTCACCGGCTCTAGATCGAATGTGCACCCCTCG
CTTTATGGTGTGGAGCCGAGCGAAGCGTTCGAGCCTTACGATGATGCCCGCGACGCCACATCGCTGCCGCTCATCCGCGC
GGCCATCGAAAAAGGCGTTCCGGTATTGGCGATCTGCCGGGGACTTCAGGAGTTGAACGTGGCACTGGGCGGCACGCTTG
CCACGGAAATCCAGGGACTTGCAGGCCGAATGGACCATCGGGCAACGGATTCGGAGAGCCAGGCGGAGCGCTTCGCCATC
CGCCACCCGGTAAAACTCAATCCGAACTCATGCCTTGCGGAAATCCTGAAGGAAGAAAGCGTGCGGGTGAATTCCGTTCA
CCGGCAGGCTATCGACAAGCTCGCACCCCGGCTTGAGGTCGAAGCCGTTGCCGAGGACGGCACGGTCGAAGCCGTGTCGG
TGAAGAACGCCAGGGGATTTGTCGTCGGCGTCCAATGGCACCCGGAATACTGGGTCCAGTCCGATGCGCCTTCGCGCAGA
ATTTTCGAGGCATTCGGCGATGCCGTGCGGGAACATAGGGCAGTAGGGCAGTAG

Upstream 100 bases:

>100_bases
AAAGACGCCATCTCTTCTTGATTGCACGCATGGATGCGGAGAAGTAAAGAACGACGCAAATTCACATTTTTGGCTCTAAA
ATGCTCTAAAGGCCAGGCCG

Downstream 100 bases:

>100_bases
GGCAGTGGGGCAGTGGGGCAGTGGGGCAGTGGGGCAGTGGGGCAGTGGGGCAGTGGGGCAGTGAAGAATATGGTCGCTGC
GCTCATGCGCAACCAAAACA

Product: peptidase C26

Products: NA

Alternate protein names: Gamma-Glu-GABA hydrolase [H]

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MNPNIKKSSRPLVAVPTDVKPFENYVWHAAPEQYLAAAIEVAQVTPLLVPSFGDKMDFDAILDAVDGLLVTGSRSNVHPS
LYGVEPSEAFEPYDDARDATSLPLIRAAIEKGVPVLAICRGLQELNVALGGTLATEIQGLAGRMDHRATDSESQAERFAI
RHPVKLNPNSCLAEILKEESVRVNSVHRQAIDKLAPRLEVEAVAEDGTVEAVSVKNARGFVVGVQWHPEYWVQSDAPSRR
IFEAFGDAVREHRAVGQ

Sequences:

>Translated_257_residues
MNPNIKKSSRPLVAVPTDVKPFENYVWHAAPEQYLAAAIEVAQVTPLLVPSFGDKMDFDAILDAVDGLLVTGSRSNVHPS
LYGVEPSEAFEPYDDARDATSLPLIRAAIEKGVPVLAICRGLQELNVALGGTLATEIQGLAGRMDHRATDSESQAERFAI
RHPVKLNPNSCLAEILKEESVRVNSVHRQAIDKLAPRLEVEAVAEDGTVEAVSVKNARGFVVGVQWHPEYWVQSDAPSRR
IFEAFGDAVREHRAVGQ
>Mature_257_residues
MNPNIKKSSRPLVAVPTDVKPFENYVWHAAPEQYLAAAIEVAQVTPLLVPSFGDKMDFDAILDAVDGLLVTGSRSNVHPS
LYGVEPSEAFEPYDDARDATSLPLIRAAIEKGVPVLAICRGLQELNVALGGTLATEIQGLAGRMDHRATDSESQAERFAI
RHPVKLNPNSCLAEILKEESVRVNSVHRQAIDKLAPRLEVEAVAEDGTVEAVSVKNARGFVVGVQWHPEYWVQSDAPSRR
IFEAFGDAVREHRAVGQ

Specific function: Involved in the breakdown of putrescine via hydrolysis of the gamma-glutamyl linkage of gamma-glutamyl-gamma- aminobutyrate [H]

COG id: COG2071

COG function: function code R; Predicted glutamine amidotransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081871, Length=251, Percent_Identity=36.6533864541833, Blast_Score=139, Evalue=2e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017926
- InterPro:   IPR011697 [H]

Pfam domain/function: PF07722 Peptidase_C26 [H]

EC number: =3.5.1.94 [H]

Molecular weight: Translated: 28036; Mature: 28036

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPNIKKSSRPLVAVPTDVKPFENYVWHAAPEQYLAAAIEVAQVTPLLVPSFGDKMDFDA
CCCCCCCCCCCEEEECCCCCHHHHHHCCCCHHHHHHHHHHHHHHCHHCCCCCCCCCCHHH
ILDAVDGLLVTGSRSNVHPSLYGVEPSEAFEPYDDARDATSLPLIRAAIEKGVPVLAICR
HHHHHCCEEEECCCCCCCCCEECCCHHHHCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHH
GLQELNVALGGTLATEIQGLAGRMDHRATDSESQAERFAIRHPVKLNPNSCLAEILKEES
HHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEECCHHHHHHHHHHCC
VRVNSVHRQAIDKLAPRLEVEAVAEDGTVEAVSVKNARGFVVGVQWHPEYWVQSDAPSRR
CHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEECCCCEEEEEEEECCCCCCCCCCCHHH
IFEAFGDAVREHRAVGQ
HHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNPNIKKSSRPLVAVPTDVKPFENYVWHAAPEQYLAAAIEVAQVTPLLVPSFGDKMDFDA
CCCCCCCCCCCEEEECCCCCHHHHHHCCCCHHHHHHHHHHHHHHCHHCCCCCCCCCCHHH
ILDAVDGLLVTGSRSNVHPSLYGVEPSEAFEPYDDARDATSLPLIRAAIEKGVPVLAICR
HHHHHCCEEEECCCCCCCCCEECCCHHHHCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHH
GLQELNVALGGTLATEIQGLAGRMDHRATDSESQAERFAIRHPVKLNPNSCLAEILKEES
HHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEECCHHHHHHHHHHCC
VRVNSVHRQAIDKLAPRLEVEAVAEDGTVEAVSVKNARGFVVGVQWHPEYWVQSDAPSRR
CHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEECCCCEEEEEEEECCCCCCCCCCCHHH
IFEAFGDAVREHRAVGQ
HHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]