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The map label for this gene is nodN [H]

Identifier: 225686727

GI number: 225686727

Start: 934894

End: 935370

Strand: Reverse

Name: nodN [H]

Synonym: BMEA_B0954

Alternate gene names: 225686727

Gene position: 935370-934894 (Counterclockwise)

Preceding gene: 225686728

Following gene: 225686726

Centisome position: 78.9

GC content: 57.86

Gene sequence:

>477_bases
ATGAAAAACGCGATCACGCTTGACCAGTTGCGCGAATCCATAGGCACGGAAATTGGTTGCTCCGAATGGCGGGAAGTCAC
GCAGGAGATGATAAACCAGTTTGCGGATGCGACGGATGACCATCAGTTCATCCATGTCGATCCAGAGCGCGCAGCCAAGG
AAACGCCGTTCGGGGGCACGATTGCGCATGGCTTTCTCACGCTGTCACTGCTTTCCACGCTGGCCTATGAGGCGCTTCCG
ATGTTGGAAGGGGCTACGATGGGCATCAATTACGGCTTCGACAAGCTGCGCTTCGTGTCGCCTGTGAAGACTGGCGCGCG
CGTGCGCGCCCGCTTCAAGCTGGCGGATGCAGACATCCGCCCATCGGGGCGCGTGGTCAATCATTACGATGTGACGCTGG
AAATCGAAAACTCGCTGAAGCCCGCGCTTACTGCCACCTGGCTTATCATTACCATGGTGGAACCGCCGGAAGCCTGA

Upstream 100 bases:

>100_bases
TCCGCGAAATTCTGGCCGCGGCCTGAGCGGCAAGGGCTTGCCGCTGCGTCTTTATCGGTTAAACAGAAGATGATATTATA
TCAGCAGGAAATGGCAGGGA

Downstream 100 bases:

>100_bases
AACATGTCTGGCAAAGGTGGGAACCGCCCGCGCGGGGAATAGTTTGGGTGTCGTATGATAAAACGCGATACGCTTTAAGC
TGCTTCGGGATAATCTTCGG

Product: MaoC domain-containing protein dehydratase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MKNAITLDQLRESIGTEIGCSEWREVTQEMINQFADATDDHQFIHVDPERAAKETPFGGTIAHGFLTLSLLSTLAYEALP
MLEGATMGINYGFDKLRFVSPVKTGARVRARFKLADADIRPSGRVVNHYDVTLEIENSLKPALTATWLIITMVEPPEA

Sequences:

>Translated_158_residues
MKNAITLDQLRESIGTEIGCSEWREVTQEMINQFADATDDHQFIHVDPERAAKETPFGGTIAHGFLTLSLLSTLAYEALP
MLEGATMGINYGFDKLRFVSPVKTGARVRARFKLADADIRPSGRVVNHYDVTLEIENSLKPALTATWLIITMVEPPEA
>Mature_158_residues
MKNAITLDQLRESIGTEIGCSEWREVTQEMINQFADATDDHQFIHVDPERAAKETPFGGTIAHGFLTLSLLSTLAYEALP
MLEGATMGINYGFDKLRFVSPVKTGARVRARFKLADADIRPSGRVVNHYDVTLEIENSLKPALTATWLIITMVEPPEA

Specific function: Involved in the production of the root hair deformation (HAD) factor specifically on medicago [H]

COG id: COG2030

COG function: function code I; Acyl dehydratase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To the R.leguminosarum biovar viciae counterpart [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002539 [H]

Pfam domain/function: PF01575 MaoC_dehydratas [H]

EC number: NA

Molecular weight: Translated: 17534; Mature: 17534

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNAITLDQLRESIGTEIGCSEWREVTQEMINQFADATDDHQFIHVDPERAAKETPFGGT
CCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHCCCCCCCH
IAHGFLTLSLLSTLAYEALPMLEGATMGINYGFDKLRFVSPVKTGARVRARFKLADADIR
HHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHEEECCCCCCCEEEEEEEEECCCCC
PSGRVVNHYDVTLEIENSLKPALTATWLIITMVEPPEA
CCCCEEEEEEEEEEECCCCCCHHHEEEEEEEEECCCCC
>Mature Secondary Structure
MKNAITLDQLRESIGTEIGCSEWREVTQEMINQFADATDDHQFIHVDPERAAKETPFGGT
CCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHCCCCCCCH
IAHGFLTLSLLSTLAYEALPMLEGATMGINYGFDKLRFVSPVKTGARVRARFKLADADIR
HHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHEEECCCCCCCEEEEEEEEECCCCC
PSGRVVNHYDVTLEIENSLKPALTATWLIITMVEPPEA
CCCCEEEEEEEEEEECCCCCCHHHEEEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1909418; 11481432 [H]