| Definition | Brucella melitensis ATCC 23457 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_012442 |
| Length | 1,185,518 |
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The map label for this gene is lldD [H]
Identifier: 225686679
GI number: 225686679
Start: 883774
End: 884919
Strand: Direct
Name: lldD [H]
Synonym: BMEA_B0902
Alternate gene names: 225686679
Gene position: 883774-884919 (Clockwise)
Preceding gene: 225686667
Following gene: 225686680
Centisome position: 74.55
GC content: 57.94
Gene sequence:
>1146_bases ATGTCCAATATCGTTGAAATCGCCGATCTGAAGCGGCTTGCCCGGCGCCGCGTCCCCAAGATGTTTTTCGACTATGCCGA TTCTGGCGCCTGGACAGAGTCCACCTACCGGGCAAACGAAGACGACTTCAAGAAGATCAAGCTGCGGCAGCGGGTTCTGG TTGACATGACCAACCGCTCGCTCGAAACGACCATGATCGGCGAGAAAGTGGCCATGCCCGTGGCGCTTGCCCCGACCGGC CTGACAGGCATGCAGCATGCCAATGGCGAAATGCTCGCGGCACAGGCGGCAGAAGCTTTCGGTGTTCCCTTCACCCTTTC CACCATGAGCATCTGCTCCATCGAGGATGTCGCCTCGGTGACGAAGAAGCCGTTCTGGTTCCAGCTCTATGTGATGCGGG ACCGCGATTTCGTAAAAAACCTGATTGGCCGCGCCAAGGCTGCCGGTTGCTCGGCCCTGGTTCTCACCCTTGATCTCCAG ATTCTCGGCCAGCGCCACAAGGATATCCGCAACGGCCTTTCCGCTCCGCCGAAATTTACGCCCAAGCATATCTGGCAGAT GGCGACCTGCCCCGCCTGGTGCCTTGGAATGCTGGGTACGCAGCGGCGCACCTTCCGCAACATTGCCGGCTATGCGAAAA ATGTTACCGATCTGTCGTCGCTGTCTTCCTGGACGGCAGAACAGTTCGATCCGCAGCTCAACTGGAGCGACGTCGAGTGG ATCAAGGAACAATGGGGCGGCAAGCTCATCCTCAAGGGTATTCTCGACGTCGAAGATGCCAAAATGGCCGCGAAATCCGG TGCTGACGCCATTATCGTATCCAATCATGGCGGACGCCAGCTCGACGGCGCCCCCTCATCCATCTCCATGCTGCAACCGA TTGTTGAAGCCGTGGGCGACAGAATCGAGGTTCATGTCGATGGCGGCATTCGTTCCGGCCAGGACGTGCTGAAAGCGCGC GCACTCGGCGCACAGGGCGTTTATATCGGCCGTCCGTTCCTTTATGGCCTTGGCGCCATGGGCAACGAAGGCGTGACGCT TGCACTGGAAATCATCCGCAAGGAAATGGACATCACCATGGCCCTCTGCGGCAAACGCGACATCAATGAAATCGACAAGT CGATTATCCATTCGATCGATTTCTGA
Upstream 100 bases:
>100_bases CCGCGAGCCATTTGTTATCGAATTGCTTGTTGGGACTTGATTTCAAGCGCGCGATCCGTCATTCGATTGGTAAAGAAAAC TGACCACAAAGGGTGGGATG
Downstream 100 bases:
>100_bases TCTATCCACCAACAGATATAAGGCCCGATAATAGTCGGGCTTTATTCCAGCTTTTTAATAAATATCTTGGTTTATTATGC CTGCGACTGAGTTAACACCA
Product: FMN-dependent dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 381; Mature: 380
Protein sequence:
>381_residues MSNIVEIADLKRLARRRVPKMFFDYADSGAWTESTYRANEDDFKKIKLRQRVLVDMTNRSLETTMIGEKVAMPVALAPTG LTGMQHANGEMLAAQAAEAFGVPFTLSTMSICSIEDVASVTKKPFWFQLYVMRDRDFVKNLIGRAKAAGCSALVLTLDLQ ILGQRHKDIRNGLSAPPKFTPKHIWQMATCPAWCLGMLGTQRRTFRNIAGYAKNVTDLSSLSSWTAEQFDPQLNWSDVEW IKEQWGGKLILKGILDVEDAKMAAKSGADAIIVSNHGGRQLDGAPSSISMLQPIVEAVGDRIEVHVDGGIRSGQDVLKAR ALGAQGVYIGRPFLYGLGAMGNEGVTLALEIIRKEMDITMALCGKRDINEIDKSIIHSIDF
Sequences:
>Translated_381_residues MSNIVEIADLKRLARRRVPKMFFDYADSGAWTESTYRANEDDFKKIKLRQRVLVDMTNRSLETTMIGEKVAMPVALAPTG LTGMQHANGEMLAAQAAEAFGVPFTLSTMSICSIEDVASVTKKPFWFQLYVMRDRDFVKNLIGRAKAAGCSALVLTLDLQ ILGQRHKDIRNGLSAPPKFTPKHIWQMATCPAWCLGMLGTQRRTFRNIAGYAKNVTDLSSLSSWTAEQFDPQLNWSDVEW IKEQWGGKLILKGILDVEDAKMAAKSGADAIIVSNHGGRQLDGAPSSISMLQPIVEAVGDRIEVHVDGGIRSGQDVLKAR ALGAQGVYIGRPFLYGLGAMGNEGVTLALEIIRKEMDITMALCGKRDINEIDKSIIHSIDF >Mature_380_residues SNIVEIADLKRLARRRVPKMFFDYADSGAWTESTYRANEDDFKKIKLRQRVLVDMTNRSLETTMIGEKVAMPVALAPTGL TGMQHANGEMLAAQAAEAFGVPFTLSTMSICSIEDVASVTKKPFWFQLYVMRDRDFVKNLIGRAKAAGCSALVLTLDLQI LGQRHKDIRNGLSAPPKFTPKHIWQMATCPAWCLGMLGTQRRTFRNIAGYAKNVTDLSSLSSWTAEQFDPQLNWSDVEWI KEQWGGKLILKGILDVEDAKMAAKSGADAIIVSNHGGRQLDGAPSSISMLQPIVEAVGDRIEVHVDGGIRSGQDVLKARA LGAQGVYIGRPFLYGLGAMGNEGVTLALEIIRKEMDITMALCGKRDINEIDKSIIHSIDF
Specific function: Unknown
COG id: COG1304
COG function: function code C; L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FMN hydroxy acid dehydrogenase domain [H]
Homologues:
Organism=Homo sapiens, GI11068137, Length=378, Percent_Identity=35.978835978836, Blast_Score=259, Evalue=4e-69, Organism=Homo sapiens, GI54234014, Length=382, Percent_Identity=37.696335078534, Blast_Score=237, Evalue=2e-62, Organism=Homo sapiens, GI7705393, Length=382, Percent_Identity=37.696335078534, Blast_Score=237, Evalue=2e-62, Organism=Escherichia coli, GI1790033, Length=372, Percent_Identity=47.3118279569892, Blast_Score=347, Evalue=6e-97, Organism=Caenorhabditis elegans, GI193208036, Length=383, Percent_Identity=36.2924281984334, Blast_Score=229, Evalue=2e-60, Organism=Caenorhabditis elegans, GI32566217, Length=291, Percent_Identity=33.3333333333333, Blast_Score=155, Evalue=5e-38, Organism=Saccharomyces cerevisiae, GI6323587, Length=391, Percent_Identity=33.2480818414322, Blast_Score=202, Evalue=5e-53, Organism=Drosophila melanogaster, GI281363140, Length=374, Percent_Identity=36.3636363636364, Blast_Score=237, Evalue=8e-63, Organism=Drosophila melanogaster, GI78707190, Length=374, Percent_Identity=36.3636363636364, Blast_Score=237, Evalue=8e-63, Organism=Drosophila melanogaster, GI78707188, Length=374, Percent_Identity=35.8288770053476, Blast_Score=237, Evalue=1e-62,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR012133 - InterPro: IPR000262 - InterPro: IPR008259 - InterPro: IPR020920 [H]
Pfam domain/function: PF01070 FMN_dh [H]
EC number: =1.1.2.3 [H]
Molecular weight: Translated: 41993; Mature: 41862
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: PS00557 FMN_HYDROXY_ACID_DH
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNIVEIADLKRLARRRVPKMFFDYADSGAWTESTYRANEDDFKKIKLRQRVLVDMTNRS CCCHHHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC LETTMIGEKVAMPVALAPTGLTGMQHANGEMLAAQAAEAFGVPFTLSTMSICSIEDVASV HHHHHCCHHHCCCEEECCCCCCCCCCCCCCCHHHHHHHHHCCCEEECHHHHHHHHHHHHH TKKPFWFQLYVMRDRDFVKNLIGRAKAAGCSALVLTLDLQILGQRHKDIRNGLSAPPKFT HCCCEEEEEEEECCHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCC PKHIWQMATCPAWCLGMLGTQRRTFRNIAGYAKNVTDLSSLSSWTAEQFDPQLNWSDVEW HHHHHHHHCHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHH IKEQWGGKLILKGILDVEDAKMAAKSGADAIIVSNHGGRQLDGAPSSISMLQPIVEAVGD HHHHCCCEEEEHHHHCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCC RIEVHVDGGIRSGQDVLKARALGAQGVYIGRPFLYGLGAMGNEGVTLALEIIRKEMDITM EEEEEECCCCCCCHHHHHHHHCCCCCEEECCHHHHHCCCCCCCCHHHHHHHHHHHHHHHH ALCGKRDINEIDKSIIHSIDF HHHCCCCHHHHHHHHHHHCCC >Mature Secondary Structure SNIVEIADLKRLARRRVPKMFFDYADSGAWTESTYRANEDDFKKIKLRQRVLVDMTNRS CCHHHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC LETTMIGEKVAMPVALAPTGLTGMQHANGEMLAAQAAEAFGVPFTLSTMSICSIEDVASV HHHHHCCHHHCCCEEECCCCCCCCCCCCCCCHHHHHHHHHCCCEEECHHHHHHHHHHHHH TKKPFWFQLYVMRDRDFVKNLIGRAKAAGCSALVLTLDLQILGQRHKDIRNGLSAPPKFT HCCCEEEEEEEECCHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCC PKHIWQMATCPAWCLGMLGTQRRTFRNIAGYAKNVTDLSSLSSWTAEQFDPQLNWSDVEW HHHHHHHHCHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHH IKEQWGGKLILKGILDVEDAKMAAKSGADAIIVSNHGGRQLDGAPSSISMLQPIVEAVGD HHHHCCCEEEEHHHHCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCC RIEVHVDGGIRSGQDVLKARALGAQGVYIGRPFLYGLGAMGNEGVTLALEIIRKEMDITM EEEEEECCCCCCCHHHHHHHHCCCCCEEECCHHHHHCCCCCCCCHHHHHHHHHHHHHHHH ALCGKRDINEIDKSIIHSIDF HHHCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA